Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30410
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122157-1|AAM52669.1|  780|Drosophila melanogaster LD10695p pro...    33   0.46 
AE014135-124|AAF59321.1|  767|Drosophila melanogaster CG1783-PA ...    33   0.46 
AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-P...    30   2.5  

>AY122157-1|AAM52669.1|  780|Drosophila melanogaster LD10695p
           protein.
          Length = 780

 Score = 32.7 bits (71), Expect = 0.46
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = -2

Query: 648 LNPRPPKEN*KHTPTFYPLILT*YNISNSSRPTSKCQANESETSNVALQRGDKISGLNLV 469
           L  +P  ++  H P F    L+ Y+  +S    ++C  + S   N  L  G+    + +V
Sbjct: 644 LRVKPTDDSYSHCPQFNAPNLSSYHFVSSQEVANRCHISTSLQKNATLLNGESAEEIPMV 703

Query: 468 YRVNR 454
           ++V R
Sbjct: 704 WKVKR 708


>AE014135-124|AAF59321.1|  767|Drosophila melanogaster CG1783-PA
           protein.
          Length = 767

 Score = 32.7 bits (71), Expect = 0.46
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = -2

Query: 648 LNPRPPKEN*KHTPTFYPLILT*YNISNSSRPTSKCQANESETSNVALQRGDKISGLNLV 469
           L  +P  ++  H P F    L+ Y+  +S    ++C  + S   N  L  G+    + +V
Sbjct: 631 LRVKPTDDSYSHCPQFNAPNLSSYHFVSSQEVANRCHISTSLQKNATLLNGESAEEIPMV 690

Query: 468 YRVNR 454
           ++V R
Sbjct: 691 WKVKR 695


>AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-PA
           protein.
          Length = 300

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 216 HHCFFLFCKRKSPIFRYPFENTIFIIISCKYIIT 115
           HHCFF  C      +RY F   I+  +SC   +T
Sbjct: 125 HHCFFTGCCIGHENYRYFFYFLIYFFLSCMISLT 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,276,335
Number of Sequences: 53049
Number of extensions: 488085
Number of successful extensions: 1159
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)