Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30407
         (807 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   2.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   8.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.4  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 564 MPDLDSSVPTTGYNNGV 514
           +PD D S P+ GY N +
Sbjct: 367 LPDYDDSTPSNGYTNEI 383


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 24  FSKMSETLKLRGTLRGHNGWVTQ 92
           F K+ E  ++   LRG+  W+TQ
Sbjct: 396 FQKLREKQQIEEDLRGYLDWITQ 418


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 718  RCGGVCHHSDPTTSPSCP 665
            R  G  HHS  T  P+CP
Sbjct: 1248 RLDGPQHHSYATIGPNCP 1265


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 492 SDSHPICQPHYCILWLG 542
           SD  P+C+P +  LW G
Sbjct: 811 SDEVPVCEPGHLKLWDG 827


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 586 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 681
           INH G++   N        SL  +GG+  + M
Sbjct: 63  INHQGNAASANVAVADRQQSLILAGGRRQRIM 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 955,443
Number of Sequences: 2352
Number of extensions: 20458
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)