Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30407
(807 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 152 3e-37
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 150 9e-37
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 149 2e-36
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 66 3e-11
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 64 1e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 63 2e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 60 1e-09
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 59 4e-09
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 59 4e-09
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 57 1e-08
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 56 3e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 55 5e-08
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 54 8e-08
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 54 8e-08
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 54 8e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 54 1e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 54 1e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 53 2e-07
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 52 3e-07
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 52 3e-07
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 52 5e-07
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 52 5e-07
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 52 5e-07
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 52 5e-07
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 52 5e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 52 6e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 52 6e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 52 6e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 52 6e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 52 6e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 51 8e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 51 8e-07
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 51 8e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 51 8e-07
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 51 1e-06
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 51 1e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 51 1e-06
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 50 1e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 2e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 50 2e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 50 2e-06
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 50 2e-06
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 50 2e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 49 3e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 49 4e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 49 4e-06
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 48 6e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 48 6e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 48 6e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 48 7e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 48 1e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 47 1e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 47 1e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 47 1e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 47 2e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 47 2e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 46 2e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 46 2e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 46 3e-05
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 46 3e-05
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 46 4e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 46 4e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 46 4e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 45 5e-05
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 45 5e-05
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 45 5e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 45 5e-05
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 45 5e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 45 7e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 7e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 44 9e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 44 9e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 1e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 1e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 44 1e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 44 2e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 44 2e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 43 2e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 43 2e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 43 3e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 43 3e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 42 4e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 42 4e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 4e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 4e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 42 4e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 42 5e-04
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 42 6e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 42 6e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 41 8e-04
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 41 8e-04
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 41 0.001
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 41 0.001
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 40 0.001
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 40 0.001
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 40 0.001
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 40 0.001
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 40 0.001
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 0.002
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 40 0.003
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 40 0.003
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 40 0.003
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.003
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 39 0.003
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 39 0.003
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 39 0.004
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 38 0.006
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 38 0.006
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 38 0.006
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 38 0.006
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 38 0.006
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 38 0.006
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 38 0.006
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 38 0.008
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 38 0.008
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.008
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 38 0.008
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 38 0.010
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 38 0.010
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 37 0.014
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 37 0.014
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 37 0.014
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 37 0.014
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 37 0.018
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 37 0.018
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 37 0.018
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 37 0.018
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 36 0.032
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.032
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.032
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.032
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 36 0.032
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 36 0.032
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.042
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.042
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 35 0.055
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 35 0.055
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 35 0.055
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 35 0.055
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 35 0.073
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 35 0.073
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.073
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.073
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.073
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 35 0.073
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 34 0.097
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.097
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.097
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.097
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.097
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 34 0.097
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 34 0.097
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 34 0.097
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.13
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 34 0.13
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 33 0.17
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.17
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 33 0.17
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 33 0.22
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.22
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.22
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.22
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.22
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 33 0.29
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 33 0.29
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.29
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.29
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.29
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 33 0.29
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.29
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 33 0.29
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 33 0.29
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 33 0.29
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.39
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.39
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 32 0.39
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.52
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.52
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.52
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 32 0.52
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.68
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 31 0.68
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.68
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 31 0.68
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.90
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.90
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.90
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 31 0.90
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 31 0.90
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 31 1.2
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 31 1.2
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 1.2
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 31 1.2
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 30 1.6
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 1.6
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.6
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 2.1
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 30 2.1
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 2.7
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 2.7
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 2.7
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 2.7
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 2.7
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 29 2.7
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 29 3.6
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 29 4.8
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 4.8
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 4.8
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 4.8
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 4.8
At5g59110.1 68418.m07407 subtilisin-like serine protease-related... 28 6.3
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 28 6.3
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 28 6.3
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 28 6.3
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 6.3
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 8.4
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 8.4
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 8.4
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 8.4
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 28 8.4
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 152 bits (368), Expect = 3e-37
Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL
Sbjct: 77 FALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLG 136
Query: 440 ECKYTIQD-DGHSDWVSCVRFSPNMPTPLL 526
ECKYTI + DGH +WVSCVRFSPN P +
Sbjct: 137 ECKYTISEGDGHKEWVSCVRFSPNTLVPTI 166
Score = 125 bits (302), Expect = 3e-29
Identities = 55/82 (67%), Positives = 66/82 (80%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
P IVS WD+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGSLCASGGKD +LWDL
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 697 DGKHLHTLDHNDIITALCFSPN 762
+GK L++L+ II +LCFSPN
Sbjct: 224 EGKKLYSLEAGSIIHSLCFSPN 245
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/74 (55%), Positives = 57/74 (77%)
Frame = +3
Query: 33 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 212
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 213 GHSHFISDVVLSSD 254
GHSHF+ DVVLSSD
Sbjct: 61 GHSHFVEDVVLSSD 74
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 LSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNT 433
+S S D+T++LW+ L K T + H + V V FS + IVS S DKT+K+WN
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN- 179
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
L CK GHS +++ V SP+
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSPD 204
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
K + S + + FSPN
Sbjct: 226 KKLYSLEAGS-IIHSLCFSPN 245
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHL-----GHSGYLNTVTVSPDGSLCASGGKDMKAML 684
IIV+ D+++ +W LT GHS ++ V +S DG SG D + L
Sbjct: 30 IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 685 WDLNDGKHLHT-LDHNDIITALCFSPNDTGYVLLS 786
WDL G+ + H + ++ FS ++ V S
Sbjct: 90 WDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
++ S DK++ LW D + G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 431 TLAECKYTIQDDGHSDWVSCVRFS 502
LA + T + GH+ V V FS
Sbjct: 92 -LATGETTRRFVGHTKDVLSVAFS 114
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWH-LTNCKLKINH-LGHSGYLNTVTVSPDGSL--CASGGKDMKAM 681
N IVS DRT+K+W+ L CK I+ GH +++ V SP+ + S D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 682 LWDLNDGKHLHTL-DHNDIITALCFSPN 762
+W+L + K ++L H+ + + SP+
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPD 204
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD-LNDG 702
+S WD +++W L + +GH+ + +V S D S +D LW+ L +
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC 138
Query: 703 KHLHTL--DHNDIITALCFSPN 762
K+ + H + ++ + FSPN
Sbjct: 139 KYTISEGDGHKEWVSCVRFSPN 160
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 39 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 194
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 34.3 bits (75), Expect = 0.097
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 245
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 246 SSD 254
S D
Sbjct: 202 SPD 204
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFS 502
HT V ++A +DN I V+ SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 738 HCLVLLTQRYWLCAAFGPSIKIW 806
H L RYWLCAA SI+IW
Sbjct: 238 HSLCFSPNRYWLCAATENSIRIW 260
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 150 bits (364), Expect = 9e-37
Identities = 68/90 (75%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL
Sbjct: 77 FALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLG 136
Query: 440 ECKYTIQD-DGHSDWVSCVRFSPNMPTPLL 526
ECKYTI + DGH +WVSCVRFSPN P +
Sbjct: 137 ECKYTISEADGHKEWVSCVRFSPNTLVPTI 166
Score = 124 bits (299), Expect = 7e-29
Identities = 55/82 (67%), Positives = 64/82 (78%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
P IVS WD+TVKVW+L NCKL+ GHSGYLNTV VSPDGSLCASGGKD +LWDL
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 697 DGKHLHTLDHNDIITALCFSPN 762
+GK L++L+ II +LCFSPN
Sbjct: 224 EGKKLYSLEAGSIIHSLCFSPN 245
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/74 (54%), Positives = 57/74 (77%)
Frame = +3
Query: 33 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 212
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 213 GHSHFISDVVLSSD 254
GHSHF+ DVVLSSD
Sbjct: 61 GHSHFVQDVVLSSD 74
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 LSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNT 433
+S S D+T++LW+ L K T + H + V V FS + IVS S DKT+K+WN
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN- 179
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
L CK GHS +++ V SP+
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPD 204
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
K + S + + FSPN
Sbjct: 226 KKLYSLEAGS-IIHSLCFSPN 245
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWH-LTNCKLKINHL-GHSGYLNTVTVSPDGSL--CASGGKDMKAM 681
N IVS DRT+K+W+ L CK I+ GH +++ V SP+ + S D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 682 LWDLNDGKHLHTL-DHNDIITALCFSPN 762
+W+L + K +TL H+ + + SP+
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPD 204
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +1
Query: 481 GVMC---QILTQYANPI-----IVSCGWDRTVKVWHLTNCKLKIN-----HLGHSGYLNT 621
G MC ++T A P+ IV+ D+++ +W LT GHS ++
Sbjct: 9 GTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQD 68
Query: 622 VTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDTGYVLLS 786
V +S DG SG D + LWDL G+ + H + ++ FS ++ V S
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
++ S DK++ LW D + G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD 91
Query: 431 TLAECKYTIQDDGHSDWVSCVRFS 502
LA + T + GH+ V V FS
Sbjct: 92 -LATGESTRRFVGHTKDVLSVAFS 114
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 39 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 194
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD-LNDG 702
+S WD +++W L + +GH+ + +V S D S +D LW+ L +
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC 138
Query: 703 KH-LHTLD-HNDIITALCFSPN 762
K+ + D H + ++ + FSPN
Sbjct: 139 KYTISEADGHKEWVSCVRFSPN 160
Score = 34.3 bits (75), Expect = 0.097
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFS 502
HT V ++A VDN IV+ SRDK+I LW E K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 245
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 246 SSD 254
S D
Sbjct: 202 SPD 204
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 738 HCLVLLTQRYWLCAAFGPSIKIW 806
H L RYWLCAA SI+IW
Sbjct: 238 HSLCFSPNRYWLCAATENSIRIW 260
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 149 bits (362), Expect = 2e-36
Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS SRD+TIKLWNTL
Sbjct: 77 FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 136
Query: 440 ECKYTIQD--DGHSDWVSCVRFSPNMPTPLL 526
ECKYTI + +GH DWVSCVRFSPN P +
Sbjct: 137 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 167
Score = 124 bits (300), Expect = 5e-29
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
P IVS WD+TVKVW+L+NCKL+ GH+GY++TV VSPDGSLCASGGKD +LWDL
Sbjct: 165 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 224
Query: 697 DGKHLHTLDHNDIITALCFSPN 762
+GK L++L+ N +I ALCFSPN
Sbjct: 225 EGKKLYSLEANSVIHALCFSPN 246
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = +3
Query: 33 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 212
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 213 GHSHFISDVVLSSD 254
GHSHF+ DVVLSSD
Sbjct: 61 GHSHFVEDVVLSSD 74
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+S SWDKT+++W+L+ K HT V +VA S D SG +D + LW+ LAE
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEG 226
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
K + +S + + FSPN
Sbjct: 227 KKLYSLEANS-VIHALCFSPN 246
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWD-LAAGKTT--RRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWN 430
+S S D+T++LW+ L K T E H V V FS + Q IVS S DKT+K+WN
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSPN 508
L+ CK GH+ +VS V SP+
Sbjct: 181 -LSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+S S DK++ LW D A G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 431 TLAECKYTIQDDGHSDWVSCVRFS 502
LA T + GH+ V V FS
Sbjct: 92 -LAAGVSTRRFVGHTKDVLSVAFS 114
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCK-----LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
IIVS D+++ +W LT + GHS ++ V +S DG SG D + L
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 685 WDLNDGKHLHT-LDHNDIITALCFS 756
WDL G + H + ++ FS
Sbjct: 90 WDLAAGVSTRRFVGHTKDVLSVAFS 114
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWH-LTNCKLKINH--LGHSGYLNTVTVSPD--GSLCASGGKDMKA 678
N IVS DRT+K+W+ L CK I+ GH +++ V SP+ S D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Query: 679 MLWDLNDGKHLHTL-DHNDIITALCFSPN 762
+W+L++ K TL H ++ + SP+
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 194
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 245
GH WV+ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-----LRSTLAGHTGYVSTVAV 202
Query: 246 SSD 254
S D
Sbjct: 203 SPD 205
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFS 502
HT V ++A +DN I VS SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 72
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD-LNDG 702
+S WD +++W L +GH+ + +V S D S +D LW+ L +
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC 138
Query: 703 KHLHT---LDHNDIITALCFSPN 762
K+ + H D ++ + FSPN
Sbjct: 139 KYTISEGGEGHRDWVSCVRFSPN 161
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 738 HCLVLLTQRYWLCAAFGPSIKIW 806
H L RYWLCAA IKIW
Sbjct: 239 HALCFSPNRYWLCAATEHGIKIW 261
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W+
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 437 -AECKYTIQDDGHSDWVSCVRFSPN 508
C T+ DD S VS +FSPN
Sbjct: 201 EGTCLKTLIDD-KSPAVSFAKFSPN 224
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
N S S DKT+ LW R+E H+ + +A+S D+ S S D T+++W+
Sbjct: 56 NLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDAR 115
Query: 437 A--ECKYTIQDDGHSDWVSCVRFSP 505
+ EC ++ GH+++V CV F+P
Sbjct: 116 SPYECLKVLR--GHTNFVFCVNFNP 138
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+IVS +D T+++W + K HS +++V + DGSL S D +WD +
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 700 GKHLHTL--DHNDIITALCFSPNDTGYVLLSDLPS 798
G L TL D + ++ FSPN ++L++ L S
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGK-FILVATLDS 235
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIKLW 427
Y +SGS D + LWDL A +R E HT V+SV+ V N SG+ DKTI++W
Sbjct: 272 YIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
+Y S S D TLR+WD + + + HT V V F+ + IVSGS D+TI++W
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 434 -LAECKYTIQDDGHSDWVSCVRFS 502
+C I+ HS +S V F+
Sbjct: 158 KTGKCVRMIK--AHSMPISSVHFN 179
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDKTIKLWN 430
+ L + D TL+L + A GK + + HT V + AFSV N + IVSGS D + LW+
Sbjct: 227 FILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSP 505
A + +GH+D V V P
Sbjct: 287 LQAR-NILQRLEGHTDAVISVSCHP 310
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +3
Query: 60 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 239
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 240 VLSSDVITHFPVLGTRLCVCGISLQARLPDDSRTILR 350
SSD +H+ + C I AR P + +LR
Sbjct: 92 AWSSD--SHYTCSASDDCTLRI-WDARSPYECLKVLR 125
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ S D+T+ +W TN L + GHS ++ + S D S D +WD
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 700 G-KHLHTL-DHNDIITALCFSP 759
+ L L H + + + F+P
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNP 138
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 502
+ E HT + V FS D + S S DKT+ LW+ + +GHS +S + +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGISDLAWS 94
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPNDTGY 774
GH+ ++ V S DG+L AS D +LW + +H + H+ I+ L +S +D+ Y
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS-SDSHY 99
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 717
D T+++W + + L GH+ ++ V +P +L SG D +W++ GK +
Sbjct: 106 DCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRM 165
Query: 718 LD-HNDIITALCFSPNDTGYVLLS 786
+ H+ I+++ F N G +++S
Sbjct: 166 IKAHSMPISSVHF--NRDGSLIVS 187
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT- 433
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D ++W++
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
C T+ DD + VS VRFSPN
Sbjct: 186 TGHCVKTLIDDENPP-VSFVRFSPN 209
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 436
+ +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+++W+ T
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 437 AECKYTIQDDGHSDWVSCVRFS 502
+C + HSD V+ V F+
Sbjct: 145 GKCLKVL--PAHSDPVTAVDFN 164
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
IVS D+T+K+W + L +GH+ Y V +P ++ SG D +WD+ G
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 703 KHLHTLD-HNDIITALCFSPNDTGYVLLS 786
K L L H+D +TA+ F N G +++S
Sbjct: 146 KCLKVLPAHSDPVTAVDF--NRDGSLIVS 172
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
S S DKT+R + + + + F H + VAFS D R IVS S DKT+KLW+
Sbjct: 41 SASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWD- 99
Query: 434 LAECKYTIQD-DGHSDWVSCVRFSP 505
E I+ GH+++ CV F+P
Sbjct: 100 -VETGSLIKTLIGHTNYAFCVNFNP 123
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQIVSGSRDKTIKLWN 430
+ L G+ D TLRLW++++ K + + H + +S AFSV N ++IVSGS D + +W
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSP 505
L K + +GH++ V V P
Sbjct: 272 -LNSKKLLQKLEGHTETVMNVACHP 295
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
+SGS D + +W+L + K ++ E HT+ V++VA I SGS DKT+++W E
Sbjct: 259 VSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+IVS +D TV++W +T K HS + V + DGSL S D +WD
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 700 GKHLHTL--DHNDIITALCFSPNDTGYVLLSDL 792
G + TL D N ++ + FSPN ++L+ L
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGK-FILVGTL 218
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 711
D T+++W++++ K + GH + Y +++ +G SG +D +W+LN K L
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Query: 712 HTLD-HNDIITALCFSPND 765
L+ H + + + P +
Sbjct: 279 QKLEGHTETVMNVACHPTE 297
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 60 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 239
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 240 VLSSD 254
SSD
Sbjct: 78 AFSSD 82
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
IVS D V +W L + KL GH+ + V P +L ASG D +W
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKI-----NHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
++ S D+T++ + + I GH ++ V S D S D L
Sbjct: 38 LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKL 97
Query: 685 WDLNDGKHLHTL-DHNDIITALCFSP 759
WD+ G + TL H + + F+P
Sbjct: 98 WDVETGSLIKTLIGHTNYAFCVNFNP 123
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 39 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 170
ET L TL GH + + NP+ +MI+S S D+T+ +W +T
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVT 143
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-T 433
NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +W+ +
Sbjct: 512 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 571
Query: 434 LAECKYTIQDDGHSDWVSCVRFS 502
A C + GH+ V + +S
Sbjct: 572 TARCITPLM--GHNSCVWSLSYS 592
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y SG D T+ +WDL+ + H V S+++S + + SGS D T+KLW+ +
Sbjct: 555 YMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Query: 440 ECKYTIQDD--GHSDWVSCVRFSPNMPTPL 523
K T ++ G+S+ + +R P TP+
Sbjct: 615 STKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
D+TV++W + + +GH + ++ +SPDG ASG +D M+WDL+ + + L
Sbjct: 520 DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 579
Query: 721 -DHNDIITALCFS 756
HN + +L +S
Sbjct: 580 MGHNSCVWSLSYS 592
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 705
SC DRT ++W + + L+I +G+L+ V P+ + A+G D LWD+ G+
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIM----AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Query: 706 HLHT-LDHNDIITALCFSPNDTGYVLLSD 789
+ + H ++ +L SP D Y+ D
Sbjct: 533 CVRIFIGHRSMVLSLAMSP-DGRYMASGD 560
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 711
D T+ +W L+ + +GH+ + +++ S +GSL ASG D LWD+ L
Sbjct: 562 DGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT- 433
+Y S S D+T R+W + + R H D V + + I +GS DKT++LW+
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVRLWDVQ 529
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
EC GH V + SP+
Sbjct: 530 TGECVRIF--IGHRSMVLSLAMSPD 552
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
++ LS S D T+RLW ++ H V FS S S D+T ++W+
Sbjct: 431 DFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWS 488
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 595 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 759
LGHSG + + T SP G S D LW +L HN + FSP
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSP 470
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 182
L GH+G V +P D +LSSS D T+ +W + N
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNAN 452
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
S S+DK++RLW+ G+ F H V V++S D+R ++SGS+D T+K+W K
Sbjct: 377 SASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE--IRTK 434
Query: 449 YTIQD-DGHSDWVSCVRFSPN 508
QD GH+D V V +SP+
Sbjct: 435 KLKQDLPGHADEVFAVDWSPD 455
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
LSGS D TL++W++ K + H +V +V +S D ++VSG +D+ +KLW
Sbjct: 418 LSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D T+RLWDL + H VL+VA+S D + +VSGS+ I WN
Sbjct: 126 SGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGEL 185
Query: 449 YTIQDDGHSDWVSCVRFSP 505
GH W++ + + P
Sbjct: 186 EGSPLTGHKKWITGISWEP 204
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 508
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V +SP+
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSPD 162
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 478 LGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 657
+G + Q+ + +++S D T+K+W + KLK + GH+ + V SPDG S
Sbjct: 402 VGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 658 GGKDMKAMLW 687
GGKD LW
Sbjct: 462 GGKDRVLKLW 471
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+SGS D T+ LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
++ S D R+WD+ K+ HT V V + D I +GS+D TIK+W T +
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQG 272
Query: 446 KYTIQDDGHSDWVSCVRFS 502
K + GH W++ + S
Sbjct: 273 KLIRELKGHGHWINSLALS 291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
I S +D++V++W+ + GH G + V+ S D L SG KD +W++
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK 434
Query: 703 KHLHTL-DHNDIITALCFSPN 762
K L H D + A+ +SP+
Sbjct: 435 KLKQDLPGHADEVFAVDWSPD 455
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN 762
GH+ + V+ SPDG ASG D LWDL L T H + + + +SP+
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+ S D TV++W L GH ++ TV SPDG SG K + W+ G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Query: 703 K 705
+
Sbjct: 184 E 184
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
+VS D T+ +W + K L GH +N V SPDG AS D LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 114 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 254
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S D
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPD 371
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 66 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 197
RGH G V Q++ + ++LS S+D TL +W++ + +P
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 639
II + D T+K+W T KL GH ++N++ +S +
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 60 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 239
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 120 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDVI 260
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ +
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTEYV 295
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AEC 445
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 494 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 553
Query: 446 KYTIQ 460
YTI+
Sbjct: 554 MYTIE 558
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 660
G+M LTQ ++ S WD TV++W + K + H+ + TV PDG AS
Sbjct: 482 GLMFSPLTQ----LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASS 537
Query: 661 GKDMKAMLWDLNDGKHLHTLD 723
D + WD +G ++T++
Sbjct: 538 TLDGQINFWDTIEGVLMYTIE 558
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 496 ILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 675
+ + N + C + VW + GH +N VT SPD L A+G D K
Sbjct: 313 VFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNK 372
Query: 676 AMLWDLNDGKHLHTL-DHNDIITALCF 753
+W++ G T +H + +TAL F
Sbjct: 373 VKVWNVMSGTCFITFTEHTNAVTALHF 399
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+G+ D +++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 366 TGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHND 732
VW ++K GH ++ + SP L AS D LWD+ K + T HN
Sbjct: 461 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 520
Query: 733 IITALCFSPN 762
+ + F P+
Sbjct: 521 DVLTVAFRPD 530
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AEC 445
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 534 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 593
Query: 446 KYTIQ 460
YTI+
Sbjct: 594 MYTIE 598
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 660
G+M LTQ ++ S WD TV++W + K + H+ + TV PDG AS
Sbjct: 522 GLMFSPLTQ----LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASS 577
Query: 661 GKDMKAMLWDLNDGKHLHTLD 723
D + WD +G ++T++
Sbjct: 578 TLDGQINFWDTIEGVLMYTIE 598
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 496 ILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 675
+ + N + C + VW + GH +N VT SPD L A+G D K
Sbjct: 353 VFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNK 412
Query: 676 AMLWDLNDGKHLHTL-DHNDIITALCF 753
+W++ G T +H + +TAL F
Sbjct: 413 VKVWNVMSGTCFITFTEHTNAVTALHF 439
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+G+ D +++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 406 TGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHND 732
VW ++K GH ++ + SP L AS D LWD+ K + T HN
Sbjct: 501 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 560
Query: 733 IITALCFSPN 762
+ + F P+
Sbjct: 561 DVLTVAFRPD 570
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
RNY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 766 RNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Query: 431 -TLAECKYTIQDDGHSDWVSCVRFSP 505
C TI++ + V CV+FSP
Sbjct: 826 INERNCLGTIRNIAN---VCCVQFSP 848
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1
Query: 508 YANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAML 684
Y + S +D VK+W +T + + + H +V S + ASG D L
Sbjct: 764 YIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKL 823
Query: 685 WDLNDGKHLHTLDHNDIITALCFSPNDT 768
W++N+ L T+ + + + FSP +
Sbjct: 824 WNINERNCLGTIRNIANVCCVQFSPQSS 851
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 442
++ S DKT+++W ++ G + FE HT VL +F D Q VS D +KLWN +E
Sbjct: 557 MTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Query: 443 CKYTIQDDGHSDWV 484
C T D H D V
Sbjct: 617 CIATY--DQHEDKV 628
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ S G R ++VW L K + GH G + + G L A+ G D K ++WD++
Sbjct: 74 LLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDG 133
Query: 700 GKHLHTL-DHNDIITALCFSPNDTGYVLLS 786
G H H +++++ F P+ +L+S
Sbjct: 134 GFCTHYFRGHKGVVSSILFHPDSNKNILIS 163
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 421
+N +SGS D T+R+WDL A T ++ E H V S+A S D + S RDK +
Sbjct: 158 KNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVN 217
Query: 422 LWNTL-AECKYTI 457
LW+ CK T+
Sbjct: 218 LWDLHDYSCKATV 230
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 430
++GS DKT+RLW+ + H D+L+VAF+ + VSGS D+T+K+W+
Sbjct: 420 VTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 406
++ +SGS D+TL++W L KT H KD+ SVA + ++ + +GS
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 407 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 502
D+T +W L + + + GH + V FS
Sbjct: 520 DRTASIWR-LPDLVHVVTLKGHKRRIFSVEFS 550
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+++ D+TVK+W +++ GH+ + + DG+ S G D LW++N
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 703 KHLHTLD-HNDIITAL 747
+ + T D H D + AL
Sbjct: 616 ECIATYDQHEDKVWAL 631
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+GS D+T +W L + H + + SV FS ++ +++ S DKT+K+W
Sbjct: 516 TGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLT--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
I++S D TV+VW L N + K + H + ++ +S DG S G+D LW
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Query: 688 DLNDGKHLHTLDHNDIITAL 747
DL+D T+ +++ A+
Sbjct: 220 DLHDYSCKATVATYEVLEAV 239
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYTIQ 460
+R++D+A + H + VLS+ V N IV+GS+DKT++LWN ++ +
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV- 441
Query: 461 DDGHSDWVSCVRFS 502
GH+ + V F+
Sbjct: 442 GTGHNGDILAVAFA 455
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
DRT +W L + + GH + +V S + D +W ++DG L T
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF 579
Query: 721 D-HNDIITALCFSPNDTGYV 777
+ H + F + T +V
Sbjct: 580 EGHTSSVLRASFITDGTQFV 599
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
++C + + T+ +K G S L + +SPD L S G + +WDL
Sbjct: 34 IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
VSCG D +K+W++ + + H + + V + A+GG D LW
Sbjct: 599 VSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWD 690
N +IV+ D+TV++W+ T+ GH+G + V + S SG D +W
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 691 LN 696
L+
Sbjct: 476 LD 477
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 57 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
G GHNG + +A K +S S D+TL VW L
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +1
Query: 475 RLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 654
R V C I + +I DR VK+W + + GH G + + VS + +L A
Sbjct: 305 RNAVYCAIFDRSGRYVITGSD-DRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVA 363
Query: 655 SGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNDTG-YVLLS 786
S D +W L DG + L H +TA+ FSP Y LLS
Sbjct: 364 SASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLS 409
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS---VDNRQIVSGSRDKTIKLWN 430
S S D +R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 364 SASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 161
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIK 421
+ ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D T +
Sbjct: 171 HLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTAR 230
Query: 422 LWNTLAECKYTIQDDGHSDWVSCVRFSPN 508
LW+T A + GH V+ V+F P+
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N+ +SGS D T RLWD AA + R F H DV +V F D + +GS D T +L++
Sbjct: 218 NWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDI 277
Query: 434 LAECK---YTIQDDGHSDWVSCVRFS 502
+ Y DG + V+ + FS
Sbjct: 278 RTGHQLQVYQPHGDGENGPVTSIAFS 303
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+S D T ++W + GH G +NTV PDG +G D L+D+ G
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 703 KHL-----HTLDHNDIITALCFS 756
L H N +T++ FS
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFS 303
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 506 N 508
N
Sbjct: 118 N 118
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW-- 427
RN +S S D L +W+ + T + V++ AFS + + + G D ++
Sbjct: 77 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSL 136
Query: 428 NTLAECKYTIQDD----GHSDWVSCVRFSPNMPTPLL 526
++ A+ T+ GH +VSC ++ PN L+
Sbjct: 137 SSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 42 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 170
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIK 421
+ ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D T +
Sbjct: 109 HLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTAR 168
Query: 422 LWNTLAECKYTIQDDGHSDWVSCVRFSPN 508
LW+T A + GH V+ V+F P+
Sbjct: 169 LWDTRAASRAVRTFHGHEGDVNTVKFFPD 197
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N+ +SGS D T RLWD AA + R F H DV +V F D + +GS D T +L++
Sbjct: 156 NWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDI 215
Query: 434 LAECK---YTIQDDGHSDWVSCVRFS 502
+ Y DG + V+ + FS
Sbjct: 216 RTGHQLQVYQPHGDGENGPVTSIAFS 241
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+S D T ++W + GH G +NTV PDG +G D L+D+ G
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Query: 703 KHL-----HTLDHNDIITALCFS 756
L H N +T++ FS
Sbjct: 219 HQLQVYQPHGDGENGPVTSIAFS 241
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW-- 427
RN +S S D L +W+ + T + V++ AFS + + + G D ++
Sbjct: 15 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSL 74
Query: 428 NTLAECKYTIQDD----GHSDWVSCVRFSPNMPTPLL 526
++ A+ T+ GH +VSC ++ PN L+
Sbjct: 75 SSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 111
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 42 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 170
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 353 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 508
V S+ ++ + +IVS S+D + +WN L K T WV FSPN
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPN 56
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIK 421
+ ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D T +
Sbjct: 171 HLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTAR 230
Query: 422 LWNTLAECKYTIQDDGHSDWVSCVRFSPN 508
LW+T A + GH V+ V+F P+
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N+ +SGS D T RLWD AA + R F H DV +V F D + +GS D T +L++
Sbjct: 218 NWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDI 277
Query: 434 LAECK---YTIQDDGHSDWVSCVRFS 502
+ Y DG + V+ + FS
Sbjct: 278 RTGHQLQVYQPHGDGENGPVTSIAFS 303
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+S D T ++W + GH G +NTV PDG +G D L+D+ G
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 703 KHL-----HTLDHNDIITALCFS 756
L H N +T++ FS
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFS 303
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 506 N 508
N
Sbjct: 118 N 118
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW-- 427
RN +S S D L +W+ + T + V++ AFS + + + G D ++
Sbjct: 77 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSL 136
Query: 428 NTLAECKYTIQDD----GHSDWVSCVRFSPNMPTPLL 526
++ A+ T+ GH +VSC ++ PN L+
Sbjct: 137 SSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 42 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 170
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
S S+D T++LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+ S +D TVK+W K+ + GH + ++ SP+G ASG D +W + +G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 703 KHLHTLDHNDIITALCFS 756
K + T N I +C++
Sbjct: 574 KIVKTYTGNGGIFEVCWN 591
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
+Y L+GS D+T +WD+ A + ++FE H+ L V + +N + S D I L +
Sbjct: 378 DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCK-I 435
Query: 437 AECKYTIQDDGHSDWVSCVRFSP 505
E + GH V+CV++ P
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDP 458
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNDTG 771
GH G +N V P GSL AS D A +W++ +H L +H I + +SP G
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPG 504
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ--IVSGSRDKTIK 421
S S D T ++W++ +HTK++ ++ +S N+Q + S S D T+K
Sbjct: 465 SCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVK 524
Query: 422 LWNTLAEC-KYTIQDDGHSDWVSCVRFSPN 508
LW+ AE K +GH + V + FSPN
Sbjct: 525 LWD--AELGKMLCSFNGHREPVYSLAFSPN 552
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---------LCASGGKDM 672
++ SC D T K+W++ + H+ + T+ SP G AS D
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 673 KAMLWDLNDGKHLHTLD-HNDIITALCFSPN 762
LWD GK L + + H + + +L FSPN
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPN 552
Score = 35.5 bits (78), Expect = 0.042
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+GS D R+W L G+ H + S+ ++ +++GS D+T +W+ AE +
Sbjct: 341 TGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-E 398
Query: 449 YTIQDDGHS------DWVSCVRFSPNMPTPLLY 529
+ Q + HS DW + V F+ + ++Y
Sbjct: 399 WKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 547 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHT 717
T + H+ N ++I GH+ + SP SL ASG D A +W + +G K +HT
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHT 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 179
+L TL H G + + N K D +L+ S D+T +VW + +E
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE 398
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 418
Y SGS DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 555 YIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 496 ILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 675
I Q + SCG D +VW L + + GH + +V SP+G ASGG+D +
Sbjct: 387 IAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQ 446
Query: 676 AMLWDLNDGKHLHTLD-HNDIITALCFSPNDTGYVL 780
+WDL K L+ + H ++++ + + P + GY L
Sbjct: 447 CRIWDLRMRKSLYIIPAHANLVSQVKYEPQE-GYFL 481
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 263 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLA 439
A S D R+WDL G++ F+ H K V SV FS + + SG D ++W+ +
Sbjct: 396 AASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMR 455
Query: 440 ECKYTIQDDGHSDWVSCVRFSP 505
+ Y I H++ VS V++ P
Sbjct: 456 KSLYII--PAHANLVSQVKYEP 475
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y + S+DKT RLWD+ G E H++ V +AF D S D ++W+ L
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD-LR 411
Query: 440 ECKYTIQDDGHSDWVSCVRFSPN 508
+ + GH V V FSPN
Sbjct: 412 TGRSILVFQGHIKPVFSVNFSPN 434
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 538 WDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 714
+D+T ++W + T +L + GHS + + DG+L AS G D A +WDL G+ +
Sbjct: 359 YDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSIL 417
Query: 715 TLD-HNDIITALCFSPNDTGYVLLS 786
H + ++ FSPN GY L S
Sbjct: 418 VFQGHIKPVFSVNFSPN--GYHLAS 440
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+ S D+T +LW G + FE H + VAF + + + S DKT +LW+ +
Sbjct: 315 TASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 449 YTIQDDGHSDWVSCVRF 499
+Q +GHS V + F
Sbjct: 374 LLLQ-EGHSRSVYGIAF 389
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 293 RLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 469
+LW++ T +DH + V FS + + + S D+T KLW T T +G
Sbjct: 280 KLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTF--EG 337
Query: 470 HSDWVSCVRFSPN 508
H D ++ V F P+
Sbjct: 338 HLDRLARVAFHPS 350
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 711
DRT K+W T+ L GH L V P G + D LWD+N G L
Sbjct: 319 DRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
+ + S+D + +W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 480 FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLN 696
+++S D+TV++W T C ++ H+ Y+ V +P + + ASG D KA +W L+
Sbjct: 285 LLLSASKDKTVRLWR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Query: 697 DGKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + + D D I+A+ + PN G+V+
Sbjct: 344 EERVVAWTDVRDSISAISYQPNGNGFVV 371
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNP 322
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 433
N LS S DKT+RLW + F H V V F+ V+ SGS D ++W
Sbjct: 284 NLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASGSIDGKARIWG- 341
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
L+E + D D +S + + PN
Sbjct: 342 LSEERVVAWTDVR-DSISAISYQPN 365
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP 759
GH+G + + S D +L S KD LW + LH HN+ +T + F+P
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNP 322
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 583 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 179
L GH G V +A + +++LS+S+DKT+ +W+ D+
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQ 304
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +1
Query: 475 RLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 654
R V C IL + +I DR VKVW + + GH G + + VS + A
Sbjct: 245 RNAVYCAILDRSGRYVITGSD-DRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIA 303
Query: 655 SGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN-DTGYVLLS 786
S D +W L DG + L H +TA+ FSP + Y LLS
Sbjct: 304 SASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLS 349
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 161
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 430
+ S S D +R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNT 433
Y LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN
Sbjct: 113 YVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN- 171
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPNMPTPLL 526
L D H V+CV + P L
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKLWN 430
N S S D+T+++W+L + + H K V V + D +++GS D T K+W+
Sbjct: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 431 -TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C T+ +GH+ VS V F P +P
Sbjct: 216 YQTKSCVQTL--EGHTHNVSAVCFHPELP 242
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y ++GS D T ++WD + E HT +V +V F + I++GS D T+++W+
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ L+ + TL +W+ + FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNT 88
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMP 514
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDLNDG 702
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 703 KHLHTLD-HNDIITALCFSP 759
+ TL+ H ++A+CF P
Sbjct: 220 SCVQTLEGHTHNVSAVCFHP 239
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 69 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 188
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 700 GKHLHTL--DHNDIITALCFSPNDT 768
G + H+ + + F+P DT
Sbjct: 131 GWACTQIFEGHSHYVMQVTFNPKDT 155
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT---VTVSPD-GSLCASGGK 666
PII++ D TV++WH T +L+ + + GY+ + V + D G++ G+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
Query: 667 DMKAMLWDLNDGKHLHTLDHNDIITA 744
++ D N GK + HN+I TA
Sbjct: 302 EIPVASMD-NTGKIIWA-KHNEIQTA 325
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 GVMC-QILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 657
GV C T P +++ D T KVW GH+ ++ V P+ + +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
Query: 658 GGKDMKAMLWDLNDGKHLHTLDH 726
G +D +W + +TL++
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNY 269
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNT 433
Y LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN
Sbjct: 113 YVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN- 171
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPNMPTPLL 526
L D H V+CV + P L
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKLWN 430
N S S D+T+++W+L + + H K V V + D +++GS D T K+W+
Sbjct: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 431 -TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C T+ DGH+ VS V F P +P
Sbjct: 216 YQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMP 514
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDLNDG 702
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 703 KHLHTLD-HNDIITALCFSP 759
+ TLD H ++A+CF P
Sbjct: 220 SCVQTLDGHTHNVSAVCFHP 239
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 69 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 188
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 700 GKHLHTL--DHNDIITALCFSPNDT 768
G + H+ + + F+P DT
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNPKDT 155
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 GVMC-QILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 657
GV C T P +++ D T KVW GH+ ++ V P+ + +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT 246
Query: 658 GGKDMKAMLWDLNDGKHLHTLDH 726
G +D +W + +TL++
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNY 269
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT---VTVSPD-GSLCASGGK 666
PII++ D TV++WH T +L+ + + GY+ + V + D G++ G+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
Query: 667 DMKAMLWDLNDGKHLHTLDHNDIITA 744
++ D + GK + HN+I TA
Sbjct: 302 EIPVASMD-SSGKIIWA-KHNEIQTA 325
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNT 433
Y LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN
Sbjct: 113 YVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN- 171
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPNMPTPLL 526
L D H V+CV + P L
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKLWN 430
N S S D+T+++W+L + + H K V V + D +++GS D T K+W+
Sbjct: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 431 -TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C T+ DGH+ VS V F P +P
Sbjct: 216 YQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMP 514
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDLNDG 702
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 703 KHLHTLD-HNDIITALCFSP 759
+ TLD H ++A+CF P
Sbjct: 220 SCVQTLDGHTHNVSAVCFHP 239
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 69 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 188
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 700 GKHLHTL--DHNDIITALCFSPNDT 768
G + H+ + + F+P DT
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNPKDT 155
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 GVMC-QILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 657
GV C T P +++ D T KVW GH+ ++ V P+ + +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT 246
Query: 658 GGKDMKAMLWDLNDGKHLHTLDH 726
G +D +W + +TL++
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNY 269
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT---VTVSPD-GSLCASGGK 666
PII++ D TV++WH T +L+ + + GY+ + V + D G++ G+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
Query: 667 DMKAMLWDLNDGKHLHTLDHNDIITA 744
++ D + GK + HN+I TA
Sbjct: 302 EIPVASMD-SSGKIIWA-KHNEIQTA 325
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNT 433
Y LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN
Sbjct: 113 YVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN- 171
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPNMPTPLL 526
L D H V+CV + P L
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKLWN 430
N S S D+T+++W+L + + H K V V + D +++GS D T K+W+
Sbjct: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 431 -TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C T+ DGH+ VS V F P +P
Sbjct: 216 YQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMP 514
K + + HSD++ CV P +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDLNDG 702
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 703 KHLHTLD-HNDIITALCFSP 759
+ TLD H ++A+CF P
Sbjct: 220 SCVQTLDGHTHNVSAVCFHP 239
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 69 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 188
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 700 GKHLHTL--DHNDIITALCFSPNDT 768
G + H+ + + F+P DT
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNPKDT 155
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 GVMC-QILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 657
GV C T P +++ D T KVW GH+ ++ V P+ + +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT 246
Query: 658 GGKDMKAMLWDLNDGKHLHTLDH 726
G +D +W + +TL++
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNY 269
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT---VTVSPD-GSLCASGGK 666
PII++ D TV++WH T +L+ + + GY+ + V + D G++ G+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
Query: 667 DMKAMLWDLNDGKHLHTLDHNDIITA 744
++ D + GK + HN+I TA
Sbjct: 302 EIPVASMD-SSGKIIWA-KHNEIQTA 325
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/90 (32%), Positives = 41/90 (45%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ SC D T VW N + + GHSG + +S D S +G D A LWD+
Sbjct: 51 LLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKS 110
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVLLSD 789
GK L T ++ FS D V+ +D
Sbjct: 111 GKELFTFKFGAPARSVDFSVGDHLAVITTD 140
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
N IVS G D +++W KL +GH + ++ + D S +G D A L
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 685 WDLNDGKHLHTLDHNDIITALCFSP 759
WD+ + T + A+ SP
Sbjct: 247 WDMRTLTLIKTYTTVVPVNAVAMSP 271
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPNDTGYV 777
+N P SGG+D +WD GK L D H + IT+LC + +D+ ++
Sbjct: 178 INRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFL 236
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D T +W G+ + H+ V S D+ ++++GS D+T KLW+
Sbjct: 58 DHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKD 669
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 394
++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 95 ITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
I S WD+T+K+W ++ + K + H +N + VS +G++ +G D + +W G
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV-YTGSADRRIRVWAKPTG 266
Query: 703 KHLHTL-----DHNDIITALCFSPNDTGYVLLSDLPSRS 804
+ HTL H + AL ND G VL S RS
Sbjct: 267 EKRHTLVATLEKHKSAVNALAL--NDDGSVLFSGSCDRS 303
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+ S SWDKTL++W + + + H V ++A S N + +GS D+ I++W
Sbjct: 207 FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVST-NGTVYTGSADRRIRVW 261
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +2
Query: 269 SGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
SGS D+++ +W D + R H K +LS+ F+V + ++SGS D+T+++W
Sbjct: 297 SGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSDL-LLSGSADRTVRIWRRG 354
Query: 437 AECKYTIQD--DGHS 475
+ Y+ + GH+
Sbjct: 355 PDSSYSCLEVLSGHT 369
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFE---DHTKDVLSVAFSVDNR-----QIVSGSRDKTIK 421
LSGS D+T+R+W + E HTK V S+A + I+SGS D +K
Sbjct: 340 LSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVK 399
Query: 422 LW 427
W
Sbjct: 400 CW 401
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+GS D+ +R+W G+ E H V ++A + D + SGS D++I +W
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVW 307
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 182
S + +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 365 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 508
A +V + I S S DKT+K+W CK +I+ H D V+ + S N
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVSTN 246
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLG----HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
DR ++VW + + + H +N + ++ DGS+ SG D ++W+ D
Sbjct: 255 DRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERED 311
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 699
++S D+TV++W L++ K + HS Y+ + +P D + SG D K +W + D
Sbjct: 482 LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPD 540
Query: 700 GKHLHTLDHNDIITALCFSPNDTG 771
+ + D ++++TA C++P+ G
Sbjct: 541 HQVVDWNDLHEMVTAACYTPDGQG 564
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTL 436
+ LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++W ++
Sbjct: 481 HLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW-SI 538
Query: 437 AECKYTIQDDGHSDWVSCVRFSPNMPTPLLYPVVGT 544
+ + +D H + V+ ++P+ L+ GT
Sbjct: 539 PDHQVVDWNDLH-EMVTAACYTPDGQGALVGSYKGT 573
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
F H DVL +++S ++ ++S S DKT++LW+ K ++ HSD+V+C++F+P
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWD--LSSKTCLKVFSHSDYVTCIQFNP 518
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 655 SGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYVLLSDLPSR 801
S D LWDL+ L H+D +T + F+P D Y + L ++
Sbjct: 484 SSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAK 532
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
NY +SGS D +R+W + + + D + V + ++ D + + GS T L+NT
Sbjct: 522 NYFISGSLDAKVRIWSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNT 579
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ +SG D +++WDL AGK F+ H + S+ F + +GS DKT+K W+ L
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD-LE 308
Query: 440 ECKYTIQDDGHSDWVSCVRFSPN 508
+ + V C+ F+P+
Sbjct: 309 TFELIGSGGTETTGVRCLTFNPD 331
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D L++WD+ ++ HT+ V + F+ D R IVSG D +K+W+ L K
Sbjct: 211 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD-LTAGK 269
Query: 449 YTIQDDGHSDWVSCVRFSPN 508
+ H + + F P+
Sbjct: 270 LLHEFKSHEGKIQSLDFHPH 289
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
D +K+W + + GH+ +N + +PDG SGG+D +WDL GK LH
Sbjct: 215 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 274
Query: 721 -DHNDIITALCFSPND 765
H I +L F P++
Sbjct: 275 KSHEGKIQSLDFHPHE 290
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 445
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 169 AGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC 228
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
+T + GH+ V+ +RF+P+
Sbjct: 229 IHTYK--GHTRGVNVLRFTPD 247
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 484 VMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 663
V C + + ++ ++V+ G D V +W + ++ GHS +++VT L A+G
Sbjct: 112 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGA 171
Query: 664 KDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 759
LWDL + K + TL H ++ F P
Sbjct: 172 ASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHP 204
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
IVS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 547 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 723
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 175 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 234
Query: 724 HNDIITALCFSPN 762
H + L F+P+
Sbjct: 235 HTRGVNVLRFTPD 247
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 446 KYTIQDDGHSDWVSCVRFSP 505
K GH V F P
Sbjct: 185 KVVRTLTGHRSNCVSVNFHP 204
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+GS DKT++ WDL + T V + F+ D + ++ G ++ ++K+++
Sbjct: 295 TGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFS 347
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ SC D T +W N + + GH+G + VS D S +G D A LWD+
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVLLSD 789
GK L T N ++ F+ D V+ +D
Sbjct: 84 GKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 685 WDLNDGKHLHTLDHNDIITALCFSP 759
WD+ L T + A+ SP
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSP 244
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 31 DHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPNDTGYV 777
+N P SGG+D +WD GK L D H IT+LC + +D+ ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 394
++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ SC D T +W N + + GH+G + VS D S +G D A LWD+
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVLLSD 789
GK L T N ++ F+ D V+ +D
Sbjct: 84 GKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 685 WDLNDGKHLHTLDHNDIITALCFSP 759
WD+ L T + A+ SP
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSP 244
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 31 DHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPNDTGYV 777
+N P SGG+D +WD GK L D H IT+LC + +D+ ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 394
++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKD 669
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ SC D T +W N + + GH+G + VS D S +G D A LWD+
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVLLSD 789
GK L T N ++ F+ D V+ +D
Sbjct: 84 GKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 685 WDLNDGKHLHTLDHNDIITALCFSP 759
WD+ L T + A+ SP
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSP 244
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 31 DHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPNDTGYV 777
+N P SGG+D +WD GK L D H IT+LC + +D+ ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 394
++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKD 669
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/88 (29%), Positives = 44/88 (50%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+ L
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LE 215
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMPTPL 523
+ + V C+ F+P+ T L
Sbjct: 216 TFELIGSGGPETAGVRCLSFNPDGKTVL 243
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGK 176
Query: 449 YTIQDDGHSDWVSCVRFSPN 508
+ H + + F P+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPH 196
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 445
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
+T + GH+ V+ +RF+P+
Sbjct: 136 IHTYK--GHTRGVNVLRFTPD 154
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
D +K+W + + GH+ +N + +PDG SGG+D +WDL GK L
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 721 -DHNDIITALCFSPND 765
H I +L F P++
Sbjct: 182 KSHEGQIQSLDFHPHE 197
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 ANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
A+ ++V+ G T+K+W L K+ GH +V P G ASG D +W
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 688 DLNDGKHLHTL-DHNDIITALCFSPN 762
D+ +HT H + L F+P+
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPD 154
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 484 VMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 663
V C + + ++ ++V+ G D V +W + ++ GHS +++VT L A+G
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGA 78
Query: 664 KDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 759
LWDL + K + TL H ++ F P
Sbjct: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHP 111
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 446 KYTIQDDGHSDWVSCVRFSP 505
K GH V F P
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/88 (29%), Positives = 44/88 (50%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+ L
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LE 215
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMPTPL 523
+ + V C+ F+P+ T L
Sbjct: 216 TFELIGSGGPETAGVRCLSFNPDGKTVL 243
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGK 176
Query: 449 YTIQDDGHSDWVSCVRFSPN 508
+ H + + F P+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPH 196
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 445
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
+T + GH+ V+ +RF+P+
Sbjct: 136 IHTYK--GHTRGVNVLRFTPD 154
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
D +K+W + + GH+ +N + +PDG SGG+D +WDL GK L
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 721 -DHNDIITALCFSPND 765
H I +L F P++
Sbjct: 182 KSHEGQIQSLDFHPHE 197
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 511 ANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
A+ ++V+ G T+K+W L K+ GH +V P G ASG D +W
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 688 DLNDGKHLHTL-DHNDIITALCFSPN 762
D+ +HT H + L F+P+
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPD 154
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 484 VMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 663
V C + + ++ ++V+ G D V +W + ++ GHS +++VT L A+G
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGA 78
Query: 664 KDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 759
LWDL + K + TL H ++ F P
Sbjct: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHP 111
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 446 KYTIQDDGHSDWVSCVRFSP 505
K GH V F P
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 51.2 bits (117), Expect = 8e-07
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNT 433
Y LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN
Sbjct: 113 YVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN- 171
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPNMPTPLL 526
L D H V+CV + P L
Sbjct: 172 LGSPDPNFTLDAHLKGVNCVDYFTGGDKPYL 202
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKLWN 430
N S S D+T+++W+L + + H K V V + D +++GS D T K+W+
Sbjct: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 431 -TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C T+ +GH+ VS V F P +P
Sbjct: 216 YQTKSCVQTL--EGHTHNVSAVSFHPELP 242
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+++W+
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ L+ + TL +W+ + F+ V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNT 88
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMP 514
K + + H+D++ CV P +P
Sbjct: 89 MDKIKVFE-AHADYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 69 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 188
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDLNDG 702
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 703 KHLHTLD-HNDIITALCFSP 759
+ TL+ H ++A+ F P
Sbjct: 220 SCVQTLEGHTHNVSAVSFHP 239
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLK--INH-------LGH-SGYLNTVTVSPDGSLCASGGK 666
PII++ D TV++WH T +L+ +N+ +GH G V +GS+ G+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGR 301
Query: 667 DMKAMLWDLNDGKHLHTLDHNDIIT 741
++ D N GK + HN+I T
Sbjct: 302 EIPVASMD-NSGKIIWA-KHNEIHT 324
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 GVMC-QILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 657
GV C T P +++ D T KVW GH+ ++ V+ P+ + +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIIT 246
Query: 658 GGKDMKAMLWDLNDGKHLHTLDH 726
G +D +W + +TL++
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNY 269
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ SGS D LR+WD + ++ HT+ + ++ FS D R +VSG D +K+W+ A
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE- 442
L+G+ ++LWDL K R F H + +V F + SGS D +++W+T +
Sbjct: 23 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 82
Query: 443 CKYTIQDDGHSDWVSCVRFSPN 508
C T + GH+ +S + FSP+
Sbjct: 83 CIQTYK--GHTRGISTIEFSPD 102
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
D ++VW + GH+ ++T+ SPDG SGG D +WDL GK LH
Sbjct: 70 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 129
Query: 721 D-HNDIITALCFSP 759
H I +L F P
Sbjct: 130 KCHEGPIRSLDFHP 143
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+ +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 105 WVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 106 VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF 165
Query: 703 KHLHTLDHNDI-ITALCFSPN 762
+ + T + A+ F P+
Sbjct: 166 ELIGTTRPEATGVRAIAFHPD 186
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +1
Query: 550 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 726
+K+W L K+ GH + V P G ASG D +WD + T H
Sbjct: 31 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGH 90
Query: 727 NDIITALCFSPN 762
I+ + FSP+
Sbjct: 91 TRGISTIEFSPD 102
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 409
+GS D+T++ WDL + V ++AF D + + G D
Sbjct: 150 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLN 696
+++S D+TV++W + K + H+ Y+ + SP D + SG D K +W +
Sbjct: 519 LLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQ 577
Query: 697 DGKHLHTLDHNDIITALCFSPNDTGYVL 780
D + D ++++TA C++P+ G ++
Sbjct: 578 DRHVVEWSDLHEMVTAACYTPDGQGALI 605
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
LS S DKT+RLWD+ KT + H V + FS VD +SGS D I++W+
Sbjct: 521 LSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS 575
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/55 (34%), Positives = 37/55 (67%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++FSP
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSP 556
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 646 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYVLLSDLPSR 801
L S D LWD+ L HND +T + FSP D Y L L ++
Sbjct: 519 LLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAK 570
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
NY LSGS D +R+W + + + D + V + ++ D + + GS + ++T
Sbjct: 560 NYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDT- 617
Query: 437 AECK 448
+CK
Sbjct: 618 EDCK 621
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE- 442
L+G+ ++LWD+ K R F H + +V F + SGS D +K+W+ +
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKG 133
Query: 443 CKYTIQDDGHSDWVSCVRFSPN 508
C T + GHS +S +RF+P+
Sbjct: 134 CIQTYK--GHSRGISTIRFTPD 153
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
D +K+W + + GHS ++T+ +PDG SGG D +WDL GK LH
Sbjct: 121 DANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 721 D-HNDIITALCFSP 759
H I +L F P
Sbjct: 181 KFHEGPIRSLDFHP 194
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ SGS D L++WD+ + ++ H++ + ++ F+ D R +VSG D +K+W+ A
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+ +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 156 WVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
++G D + LW + + HT V SVAF +++G+ IKLW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 446 KYTIQDDGHSDWVSCVRFSP 505
K GH S V F P
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP 110
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
A ++++ +K+W + K+ GH + V P G ASG D +WD
Sbjct: 69 AEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWD 128
Query: 691 LNDGKHLHTL-DHNDIITALCFSPN 762
+ + T H+ I+ + F+P+
Sbjct: 129 IRKKGCIQTYKGHSRGISTIRFTPD 153
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +1
Query: 484 VMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 663
V C + + + + ++ G D V +W + ++ GH+ +++V L +G
Sbjct: 18 VNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGA 77
Query: 664 KDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 759
LWD+ + K + H +A+ F P
Sbjct: 78 SSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHP 110
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+GS D+T++ WDL + V S+ F D R + G D ++K+++
Sbjct: 201 TGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVYS 253
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +1
Query: 466 WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 642
W + + + ++ S WDR+ K+W ++ K L H +N + VS DG
Sbjct: 188 WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG 247
Query: 643 SLCASGGKDMKAMLWDLNDGKH--LHTL-DHNDIITALCFSPNDTGYVLLSDLPSRS 804
+G D K +W+ D KH + TL H + AL S + G VL S RS
Sbjct: 248 -FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAIS--EDGKVLYSGACDRS 301
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
S SWD++ ++W + K E D ++ + + +GS DK IK+WN
Sbjct: 209 SASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWN 262
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 13/68 (19%)
Frame = +2
Query: 266 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNR--------QIVSGSR 406
LSGS DK+LR+W + E HTK V S+A SV + + SGS
Sbjct: 342 LSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSL 401
Query: 407 DKTIKLWN 430
D ++K+WN
Sbjct: 402 DLSLKVWN 409
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 583 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDIITALCFS 756
K + H ++++ +S DGSL S D +W +D K L +++ H+D I A+ S
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS 244
Query: 757 PNDTGYVLLSD 789
+ Y +D
Sbjct: 245 KDGFVYTGSAD 255
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 541 DRTVKVWHLTNCK--LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LN-DGK 705
D+ +KVW+ + K L H +N + +S DG + SG D ++W+ +N D +
Sbjct: 255 DKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDE 314
Query: 706 HLH 714
LH
Sbjct: 315 ELH 317
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 57 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 164
G LRGH + +A D++LS S DK+L VW+
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWR 354
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 699
++S D TV++W + + I H ++ V +P D + SG D K +WD++
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQ 436
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + D I+TALC+ P+ G V+
Sbjct: 437 FRVVDYTDIRQIVTALCYRPDGKGAVV 463
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
+ + LS S D+T+RLW + + R H V VAF+ VD+ +SGS D +++W+
Sbjct: 374 KGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
NY +SGS D +R+WD++ + + D + V ++ + D + V GS + ++T
Sbjct: 418 NYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYHT 475
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNP 563
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/87 (25%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 699
++S D+TV++W+L++ + + HS Y+ + +P D SG D K +W + D
Sbjct: 527 LLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPD 585
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + D ++++T+ C++P+ G ++
Sbjct: 586 RQVVDWYDLHEMVTSACYTPDGQGVLV 612
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
+ LS S DKT+RLW+L++ +T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 526 HLLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 655 SGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYVLLSDLPSR 801
S D LW+L+ L H+D +T + F+P D Y + L ++
Sbjct: 529 SSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAK 577
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN- 430
+ + S +D R+WDL + F+ H K VLSV FS + + SG D ++W+
Sbjct: 142 QTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSP 505
+ + Y I H + VS V++ P
Sbjct: 202 RMRKLLYII--PAHVNLVSQVKYEP 224
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 708
S G+D +VW L + + GH + +V SP+G ASGG+D + +WDL K
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Query: 709 LHTLD-HNDIITALCFSPND 765
L+ + H ++++ + + P +
Sbjct: 207 LYIIPAHVNLVSQVKYEPQE 226
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 341 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 433
H + V V FS VD+ + + S D+T K+W T
Sbjct: 105 HKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/78 (33%), Positives = 46/78 (58%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D +++W + G RRF+ H++ V S++FS D Q++S S D+T ++ + L K
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-HGLKSGK 338
Query: 449 YTIQDDGHSDWVSCVRFS 502
+ GH+ +V+ F+
Sbjct: 339 LLKEFRGHTSYVNHAIFT 356
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAE 442
LS S+D+T R+ L +GK + F HT V F+ D +I++ S D T+K+W++ +
Sbjct: 321 LSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
Query: 443 CKYTIQ 460
C T +
Sbjct: 381 CLQTFK 386
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSGSRDKT 415
+ S S D + +WD +GK + F H VL + FS D+ + SGS+D
Sbjct: 227 FLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGK 286
Query: 416 IKLWNTLAECKYTIQDDGHSDWVSCVRFS 502
IK+W + + D HS V+ + FS
Sbjct: 287 IKIWR-IRTGVCIRRFDAHSQGVTSLSFS 314
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
++S +D+T ++ L + KL GH+ Y+N + DGS + D +WD
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKIN--------HLGHSGYLNTVTVSPDGSLCASGGKDMKA 678
+ S D ++VW + KLK + + H + + S D + ASG +D K
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKI 287
Query: 679 MLWDLNDGKHLHTLD-HNDIITALCFS 756
+W + G + D H+ +T+L FS
Sbjct: 288 KIWRIRTGVCIRRFDAHSQGVTSLSFS 314
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
DK L ++ +G H KDV+ + + + S D T+KLW
Sbjct: 461 DKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLW 509
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 699
++S D TV++W + C + H+ ++ V +P D + SG D K +WD+
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + D DI+TA+C+ P+ G V+
Sbjct: 395 CRVVDYTDIRDIVTAVCYRPDAKGAVI 421
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
+ Y LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++W+
Sbjct: 333 KGYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSPNMPTPLLYPVVG 541
+ C+ D D V+ V + P+ ++ + G
Sbjct: 392 -VTRCRVVDYTD-IRDIVTAVCYRPDAKGAVIGSMTG 426
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH G + ++ S G L +S D LW + + L T HN+ +T + F+P D Y
Sbjct: 320 GHIGEILDLSWSEKGYLLSSS-VDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYF 378
Query: 778 LLSDLPSR 801
+ + +
Sbjct: 379 ISGSIDGK 386
Score = 34.3 bits (75), Expect = 0.097
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
H G + + SPDG AS G+D +W + + + T + ++ + + F N +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQI 275
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 72 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 699
++S D TV++W + C + H+ ++ V +P D + SG D K +WD+
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + D DI+TA+C+ P+ G V+
Sbjct: 395 CRVVDYTDIRDIVTAVCYRPDAKGAVI 421
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
+ Y LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++W+
Sbjct: 333 KGYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSPNMPTPLLYPVVG 541
+ C+ D D V+ V + P+ ++ + G
Sbjct: 392 -VTRCRVVDYTD-IRDIVTAVCYRPDAKGAVIGSMTG 426
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH G + ++ S G L +S D LW + + L T HN+ +T + F+P D Y
Sbjct: 320 GHIGEILDLSWSEKGYLLSSS-VDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYF 378
Query: 778 LLSDLPSR 801
+ + +
Sbjct: 379 ISGSIDGK 386
Score = 34.3 bits (75), Expect = 0.097
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
H G + + SPDG AS G+D +W + + + T + ++ + + F N +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQI 275
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 72 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 424
RN SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 227 RNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 35.9 bits (79), Expect = 0.032
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKT 415
N+ G+ + ++ +WDL R T + + F+ +NR IV SGS DK
Sbjct: 181 NFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQT--LFFLTFNWENRNIVASGSEDKK 238
Query: 416 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNMPTPLL 526
+K+W+ +CK T++ H V V ++ P LL
Sbjct: 239 VKVWDVATGKCKVTMEH--HEKKVHAVAWNNYTPEVLL 274
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 643 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYVLLSDLPSRS 804
++ ASG +D K +WD+ GK T++H++ N T VLLS R+
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRT 281
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/90 (27%), Positives = 40/90 (44%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 660
G + + L AN + + D+TVK+W++ KL+ GH ++ S DG +
Sbjct: 212 GHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTA 271
Query: 661 GKDMKAMLWDLNDGKHLHTLDHNDIITALC 750
DM A LW + GK + + T C
Sbjct: 272 SSDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y + S DKT+++W++ K + H + V FSVD +V+ S D T +LW+ A
Sbjct: 225 YLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPA 284
Query: 440 ECKYTIQDDGHSDWVSC 490
+ + H V C
Sbjct: 285 GKEVKVYQGHHKATVCC 301
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
L+ + + +RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+ A
Sbjct: 50 LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA 109
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +2
Query: 287 TLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
T +W L GK T + + H +L S N+ + + S DKT+K+WN +
Sbjct: 185 TCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN-VDGF 243
Query: 446 KYTIQDDGHSDWV-SCV 493
K GH WV CV
Sbjct: 244 KLEKVLTGHQRWVWDCV 260
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
SGS D T+++WDL A + +E V +V + +++SG ++ I++W+ A
Sbjct: 95 SGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELISGDQNGNIRVWDLRA 150
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 367
+ ++ S D T RLW + AGK + ++ H K + A
Sbjct: 267 FLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 382 QNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNC-KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
+++S G D VK+W + N K ++GH+ + + S DGS + G D WD
Sbjct: 297 LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTE 356
Query: 697 DGKHLHTLDHNDIITALCFSPND 765
G+ + T I + +P+D
Sbjct: 357 TGQVISTFSTGKIPYVVKLNPDD 379
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
LS D +++WD+ +GK R + H K V + FS D + ++ DK IK W+T
Sbjct: 299 LSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDT 355
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 227
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 228 ISDVVLSSD 254
+ D+ S+D
Sbjct: 329 VRDICFSND 337
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 598 GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDI 735
GH +GY V SPDG SG + K WD K TL HN +
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLA 439
L+ +DK ++ WD G+ F + D++Q +++G DK I W+ +
Sbjct: 342 LTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD-IN 400
Query: 440 ECKYTIQDDGHSDWVSCVRFSPN 508
+ T + D H V+ + F N
Sbjct: 401 TGEVTQEYDQHLGAVNTITFVDN 423
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
Y + G + LW++A GK +++ H + V + FS D+ +VSGS+D +I++W+ +
Sbjct: 92 YLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLI 150
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
N +I+S DRT KVW L+ KL + ++ +N + + P G + +G +D K + +
Sbjct: 187 NAVIISSSEDRTCKVWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAI 245
Query: 694 N 696
N
Sbjct: 246 N 246
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAA---------GKTT--RRFEDHTKDVLSVAFSVD--NRQIVSGSR 406
+SGS D ++R+W L G T F +HT V + N I+S S
Sbjct: 136 VSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSE 195
Query: 407 DKTIKLWN 430
D+T K+W+
Sbjct: 196 DRTCKVWS 203
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+V G + +W + KL GH + + S D SL SG +D +W L
Sbjct: 93 LVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 637 DGSLCASGGKDMKAMLWDLNDGKHLHTLDH 726
DG+L SG +D +WD +H+ TL H
Sbjct: 274 DGNLLISGSEDGVVCVWDPKSLRHVRTLIH 303
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++VS G ++ ++VW + GH+ + + + G C SG D LWDL
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 700 GKHLHTLD-HNDIITALCFSPN 762
+ LHT H D + AL +P+
Sbjct: 287 QRCLHTYAVHTDSVWALACNPS 308
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
++Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+K W
Sbjct: 52 QSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKTW 110
Query: 428 NTLAE--CKYTIQDDGHSDWVSCV 493
+ L++ C T++ HSD+V+C+
Sbjct: 111 DGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAE 442
+SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 229 VSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQR 288
Query: 443 CKYTIQDDGHSDW 481
C +T S W
Sbjct: 289 CLHTYAVHTDSVW 301
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 424
+ LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 693
+VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 487
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 314 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 478
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG-KHLHTLDHNDIITALCFSPNDTGY 774
GH + + ++ G++ SGG + +WD G K + H D + L + TG
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL--DSTGR 268
Query: 775 VLLS 786
LS
Sbjct: 269 FCLS 272
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++VS G ++ ++VW + GH+ + + + G C SG D LWDL
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 700 GKHLHTLD-HNDIITALCFSPN 762
+ LHT H D + AL +P+
Sbjct: 287 QRCLHTYAVHTDSVWALACNPS 308
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
++Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+K W
Sbjct: 52 QSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKTW 110
Query: 428 NTLAE--CKYTIQDDGHSDWVSCV 493
+ L++ C T++ HSD+V+C+
Sbjct: 111 DGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAE 442
+SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 229 VSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQR 288
Query: 443 CKYTIQDDGHSDW 481
C +T S W
Sbjct: 289 CLHTYAVHTDSVW 301
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 424
+ LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 693
+VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 487
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 314 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 478
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG-KHLHTLDHNDIITALCFSPNDTGY 774
GH + + ++ G++ SGG + +WD G K + H D + L + TG
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL--DSTGR 268
Query: 775 VLLS 786
LS
Sbjct: 269 FCLS 272
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN- 430
R + L+ ++LWD G RF++H V V F VSG D IK+WN
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNY 80
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C +T+ GH D++ V+F P
Sbjct: 81 KTHRCLFTLL--GHLDYIRTVQFHHENP 106
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+SG D +++W+ + H + +V F +N IVS S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRT 126
Query: 446 KYTIQDDGHSDWVSCVRFSP 505
++ GH+ +V C F P
Sbjct: 127 CISVL-TGHNHYVMCASFHP 145
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +1
Query: 511 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
+ P+ VS G D +KVW+ + LGH Y+ TV + S D +W+
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Query: 691 LNDGKHLHTL-DHNDIITALCFSPND 765
+ L HN + F P +
Sbjct: 122 WQSRTCISVLTGHNHYVMCASFHPKE 147
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 508 YANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
+ NP IVS D+T+++W+ + GH+ Y+ + P L S D +W
Sbjct: 103 HENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Query: 688 DL 693
D+
Sbjct: 163 DI 164
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 242
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 243 LSSDVITHFPVLGTRLCVCGISLQARLP 326
D I + + G V S LP
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLP 217
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+ +S S D+T+R+W+ + H V+ +F +VS S D+T+++W+
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
P+IVS DR VK+W + K +++ L GH +++V + S +D +WD
Sbjct: 217 PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 30 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDTGYV 777
H G + V L SGG D K +W+ + L T L H D I + F + V
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 778 LLSD 789
SD
Sbjct: 110 SASD 113
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 335 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRF 499
E H + V +F IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF 256
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN- 430
R + L+ ++LWD G RF++H V V F VSG D IK+WN
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNY 80
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSPNMP 514
C +T+ GH D++ V+F P
Sbjct: 81 KNHRCLFTLL--GHLDYIRTVQFHHEYP 106
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 511 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
+ P+ VS G D +KVW+ N + LGH Y+ TV + S D +W+
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Query: 691 LNDGKHLHTL-DHNDIITALCFSPND 765
+ L HN + F P +
Sbjct: 122 WQSRTCVSVLTGHNHYVMCASFHPKE 147
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+SG D +++W+ + H + +V F + IVS S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
Query: 446 KYTIQDDGHSDWVSCVRFSP 505
++ GH+ +V C F P
Sbjct: 127 CVSVL-TGHNHYVMCASFHP 145
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ +S S D+T+R+W+ + H V+ +F +VS S D+T+++W+ A
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Query: 440 ECKYTI 457
K T+
Sbjct: 167 LRKKTV 172
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 436
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+ T
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATK 279
Query: 437 AECKYTIQDDGHSDWVSCVRFSPNM 511
T + + W+ V N+
Sbjct: 280 RTGLQTFRREHDRFWILAVHPEMNL 304
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
P IVS D+T+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 106 PWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 517 PIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
P+IVS DR VK+W + K +++ L GH +++V + S +D +WD
Sbjct: 217 PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Query: 691 LNDGKHLHT 717
L T
Sbjct: 277 ATKRTGLQT 285
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 30 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 242
L GHN +V + +PK D+++S+S D+T+ VW + P + + SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLF 189
Query: 243 LSSDVITHFPVLG 281
D I + + G
Sbjct: 190 GGVDAIVKYVLEG 202
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 335 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRF 499
E H + V AF IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF 256
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDL 693
+++S D+TV++W + T LK+ H+ Y+ V +P D SG D K +W++
Sbjct: 532 LLLSSSMDKTVRLWDIETQSCLKL--FAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNI 589
Query: 694 NDGKHLHTLDHNDIITALCFSPN 762
++ + + D +++TA+C++P+
Sbjct: 590 SNRQVVEWNDLKEMVTAVCYTPD 612
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
F H DVL +++S ++ ++S S DKT++LW+ E + ++ H+D+V+CV+F+P
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWD--IETQSCLKLFAHNDYVTCVQFNP 569
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 442
LS S DKT+RLWD+ + F H V V F+ +D +SGS D I++WN
Sbjct: 534 LSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN--IS 590
Query: 443 CKYTIQDDGHSDWVSCVRFSPN 508
+ ++ + + V+ V ++P+
Sbjct: 591 NRQVVEWNDLKEMVTAVCYTPD 612
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 646 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYVLLSDLPSR 801
L S D LWD+ L HND +T + F+P D Y + L ++
Sbjct: 532 LLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAK 583
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
H G + T+ SPD L AS G+D +W++ +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
+Y +SGS D +R+W++ + + + D + V +V ++ D + GS + +L++
Sbjct: 573 DYFISGSLDAKIRIWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSA- 630
Query: 437 AECK 448
+CK
Sbjct: 631 EDCK 634
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 170
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
+NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW+
Sbjct: 778 KNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 257 NYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
N+ L+ GS D + +DL KT H K V V F +D+ IVS S D ++KLWN
Sbjct: 863 NHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
+N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W
Sbjct: 433 KNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWC 492
Query: 431 TLAECKYTIQDDGHSDWVSCVRFSP 505
T E I D ++ + CV+++P
Sbjct: 493 TRQEAS-VINIDMKAN-ICCVKYNP 515
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
N S S D TLRLWD+ R F HT + V +V++ + GS + +++
Sbjct: 561 NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGSWDKTL++W L+ K + H + +VA D+ + +GS D T+K+W + K
Sbjct: 266 SGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGK 324
Query: 449 YT 454
T
Sbjct: 325 GT 326
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
++ S WD+T+KVW L++ K + H +NTV D L +G D +W
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKVW 317
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
SGSWDKTL++W L+ K E H V +V D+ + +GS D T+K+W
Sbjct: 262 SGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVW 313
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
++ S WD+T+KVW L++ K + H +NTV VS L +G D +W
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVFTGSADGTLKVW 313
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +1
Query: 523 IVSCGW-DRTVKVWHLTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+V CG D TV W + H G H + + ++ GSL SGG D +W
Sbjct: 348 VVYCGSSDGTVNFWERQKY---LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKR 404
Query: 694 N-DGKH 708
N DG H
Sbjct: 405 NGDGSH 410
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 493
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV 293
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 433
NY LS S DKT+RLW + + F H V SV F+ V+ +SGS D +++WN
Sbjct: 340 NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN- 397
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
++ C D D +S V + P+
Sbjct: 398 ISGCSVVDWAD-LKDIISAVCYRPD 421
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 699
++S D+TV++W + + + H+ Y+ +V +P + + SG D K +W+++
Sbjct: 342 LLSASMDKTVRLWKVGSNDC-LGVFAHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISG 400
Query: 700 GKHLHTLDHNDIITALCFSPNDTGYVL 780
+ D DII+A+C+ P+ G ++
Sbjct: 401 CSVVDWADLKDIISAVCYRPDGQGGII 427
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH+G + ++ S D L S D LW + L HN +T++ F+P + Y
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNENYF 384
Query: 778 LLSDLPSR 801
+ + +
Sbjct: 385 MSGSIDGK 392
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 66 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
RGH G V I+ + + +LS+S DKT+ +WK+
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKV 356
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+GS D+T+++WD+A G H + V +A S + + S DK +K W+ L + K
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 251
Query: 449 YTIQDDGHSDWVSCVRFSPNM 511
GH V C+ P +
Sbjct: 252 VIRSYHGHLSGVYCLALHPTL 272
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
DRT+K+W + LK+ GH + + VS + S G D + WDL K + +
Sbjct: 197 DRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 256
Query: 721 DHNDIITALCFSPNDTGYVLLS 786
H + C + + T VLL+
Sbjct: 257 -HGHLSGVYCLALHPTLDVLLT 277
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 657
GV C L + ++++ G D +VW + K++I L GH + +V P +
Sbjct: 262 GVYCLALHPTLD-VLLTGGRDSVCRVWDIRT-KMQIFALSGHDNTVCSVFTRPTDPQVVT 319
Query: 658 GGKDMKAMLWDLNDGKHLHTLDHN-DIITALCFSPNDTGYVLLS 786
G D WDL GK + TL H+ + A+ P + + S
Sbjct: 320 GSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASAS 363
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
L+G D R+WD+ H V SV + Q+V+GS D TIK W+
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 708
S G D+ VK W L K+ ++ GH + + + P + +GG+D +WD+
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQ 294
Query: 709 LHTLD-HNDIITALCFSPND 765
+ L H++ + ++ P D
Sbjct: 295 IFALSGHDNTVCSVFTRPTD 314
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 421
++GS D T++ WDL GKT H K V ++ S S D T K
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 308 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 204
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 487 MCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 666
+C + T+ +P +V+ D T+K W L K H + +T+ P + AS
Sbjct: 305 VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASA 364
Query: 667 DMKAMLWDLNDGKHLHTL 720
D + L G+ H +
Sbjct: 365 D-NTKKFSLPKGEFCHNM 381
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 242
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 243 LSS 251
+S+
Sbjct: 226 VSN 228
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNDT 768
GH G++ +V P +G D +WD+ G TL H + + L S T
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +1
Query: 487 MCQI-LTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 663
+C + ++++++ +VS +DRT+K+W L + N + + N + +S DG SG
Sbjct: 318 VCAVDVSKFSSRHVVSAAYDRTIKLWDL-HKGYCTNTVLFTSNCNAICLSIDGLTVFSGH 376
Query: 664 KDMKAMLWDLNDGKHL-HTLDHNDIITALCFSPN 762
D LWD+ GK L H+ +T++ S N
Sbjct: 377 MDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRN 410
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ +S ++D+T++LWDL G T T + ++ S+D + SG D ++LW+ +
Sbjct: 330 HVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQ 387
Query: 440 ECKYTIQDDGHSDWVSCVRFSPN 508
K + GHS V+ V S N
Sbjct: 388 TGKLLSEVAGHSSAVTSVSLSRN 410
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAEC 445
SG D LRLWD+ GK H+ V SV+ S + +I++ RD +++T E
Sbjct: 374 SGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEI 433
Query: 446 KYTIQDDGH---SDWV-SCV 493
T++ G+ S+W SC+
Sbjct: 434 CGTLRASGNRLASNWSRSCI 453
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 430
++ + L +WD+++G+ HT V +V S +R +VS + D+TIKLW+
Sbjct: 289 IAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 496 ILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 675
I+ +Y + + + G DR VK+W + L + G G + + V+ D +
Sbjct: 237 IVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNN 296
Query: 676 AMLWDLNDGKHLHTL-DHNDIITALCFSPNDTGYVL 780
+WD++ G+ HTL H D + A+ S + +V+
Sbjct: 297 LFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVV 332
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/79 (21%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAEC 445
+G D+ +++WD +G + ++L +A + DN+ +++ + + +W+ +
Sbjct: 248 TGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 307
Query: 446 KYTIQDDGHSDWVSCVRFS 502
++T+ GH+D V V S
Sbjct: 308 RHTL--TGHTDKVCAVDVS 324
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 478 LGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL-CA 654
LG + + + N +++ + VW +++ +++ GH+ + V VS S
Sbjct: 273 LGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVV 332
Query: 655 SGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS 756
S D LWDL+ G +T+ A+C S
Sbjct: 333 SAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLS 366
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 669
D +++W + KL GHS + +V++S +G+ + G+D
Sbjct: 378 DGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +1
Query: 535 GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 714
G D V+ + C +I+ H G ++ + +GG+D +WD N G +
Sbjct: 210 GTDHFVESTIPSTCANRIH--AHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIK 267
Query: 715 TL 720
+L
Sbjct: 268 SL 269
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ + +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI--- 592
Query: 461 DDGHSDW-VSCVRFSPNM 511
D H D ++ + SPNM
Sbjct: 593 DGVHVDVPITALSLSPNM 610
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +1
Query: 487 MCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 666
+ +I+ N ++ + D ++++ + K+ GH+ + + S DG S
Sbjct: 518 LVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSM 577
Query: 667 DMKAMLWDLNDGKHLHTLDHNDI-ITALCFSPN 762
D +WD+ K + + H D+ ITAL SPN
Sbjct: 578 DGSLRIWDVILAKQIDGV-HVDVPITALSLSPN 609
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 353 VLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNMP 514
V +++FS D R ++ SG I +WN + ++ D H + + F N P
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEP 281
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y +G D+ + +WD+ + + F H V + F ++ SGS D+T+K+WN +
Sbjct: 236 YLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VE 294
Query: 440 ECKYTIQDDGH 472
+ + ++ GH
Sbjct: 295 DKAFITENHGH 305
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 753
HS + VS DG A+GG D +WD+ +H+ H + ++ LCF
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS+D+T+++W++ H ++L++ R + G RD+T+ L++ + E
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVG-RDRTM-LYHKVPEST 338
Query: 449 YTIQDDGHSDWVSCVRFSPN 508
I S SC S N
Sbjct: 339 RMIYRAPASSLESCCFISDN 358
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 505 QYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 609
+Y + S +DRTVKVW++ + + GH G
Sbjct: 273 RYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQG 307
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 442
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 443 --CKYTIQDDGHSDWVSCVRFSP 505
C YT+ D HS V V P
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 35.5 bits (78), Expect = 0.042
Identities = 12/54 (22%), Positives = 33/54 (61%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 370 TGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Frame = +1
Query: 454 HPR*WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 633
HP T + G+ C + ++ +I + G D T ++ + ++ GHS + +V
Sbjct: 215 HPLHKTNKPGI-CSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV 273
Query: 634 PDGSLCASGGKDMKAMLW-DLNDGKHL--HTL-DHNDIITALCFSPNDTGYVLLS 786
D L + D +W + DG + +TL DH+ + A+ P + +V S
Sbjct: 274 GDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSAS 328
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +2
Query: 266 LSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
L+ S DKT+R+W + A G T DH+ +V +V N+ VS S D T +
Sbjct: 280 LTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDGTWCFY 336
Query: 428 N-TLAECKYTIQDDGHSDWVSCVRFSPN 508
+ + C + DD + + F P+
Sbjct: 337 DLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
N VS D T + L++ C +++ + PDG + +G +W
Sbjct: 321 NKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIW 380
Query: 688 DLNDGKHLHTLD-HNDIITALCFSPNDTGYVL 780
D+ ++ D H +TA+ FS N GY L
Sbjct: 381 DVKSQANVAKFDGHTGEVTAISFSEN--GYFL 410
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 182
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTN-----CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
++++ D+TV++W C +N HS + VTV P S D
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGTWCF 335
Query: 685 WDLNDGKHLHTL--DHNDI-ITALCFSPN 762
+DL+ G L + D ++ TA F P+
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 520 IIVSCGWDRTV-KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+I+ G ++V K+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 442
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 443 --CKYTIQDDGHSDWVSCVRFSP 505
C YT+ D HS V V P
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 35.5 bits (78), Expect = 0.042
Identities = 12/54 (22%), Positives = 33/54 (61%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 370 TGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Frame = +1
Query: 454 HPR*WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 633
HP T + G+ C + ++ +I + G D T ++ + ++ GHS + +V
Sbjct: 215 HPLHKTNKPGI-CSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV 273
Query: 634 PDGSLCASGGKDMKAMLW-DLNDGKHL--HTL-DHNDIITALCFSPNDTGYVLLS 786
D L + D +W + DG + +TL DH+ + A+ P + +V S
Sbjct: 274 GDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSAS 328
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +2
Query: 266 LSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
L+ S DKT+R+W + A G T DH+ +V +V N+ VS S D T +
Sbjct: 280 LTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDGTWCFY 336
Query: 428 N-TLAECKYTIQDDGHSDWVSCVRFSPN 508
+ + C + DD + + F P+
Sbjct: 337 DLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
N VS D T + L++ C +++ + PDG + +G +W
Sbjct: 321 NKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIW 380
Query: 688 DLNDGKHLHTLD-HNDIITALCFSPNDTGYVL 780
D+ ++ D H +TA+ FS N GY L
Sbjct: 381 DVKSQANVAKFDGHTGEVTAISFSEN--GYFL 410
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 182
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTN-----CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
++++ D+TV++W C +N HS + VTV P S D
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGTWCF 335
Query: 685 WDLNDGKHLHTL--DHNDI-ITALCFSPN 762
+DL+ G L + D ++ TA F P+
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 520 IIVSCGWDRTV-KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+I+ G ++V K+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 759
GH+ ++ +V SPDG A+G D LWDL + T+ +HND + ++ F P
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
SGS D + + D A GKT HT VLSV S D I +GS D+T++LW+ +
Sbjct: 218 SGSDDGHVNMHD-AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD--LKM 274
Query: 446 KYTIQD-DGHSDWVSCVRFSP 505
+ IQ H+D V V F P
Sbjct: 275 RAAIQTMSNHNDQVWSVAFRP 295
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++++ D TVK+W L + GHS + + P G + AS D ++D++
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT 91
Query: 700 GKHLHTLD 723
+ L+
Sbjct: 92 NATIAVLE 99
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
D LR++D K + + +L ++S+D + I++G D +++W+ + + K
Sbjct: 324 DGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWS-MEDRKVVAW 382
Query: 461 DDGHSDWVSCVRFSPNMPTP 520
+GH+ WVS V F N +P
Sbjct: 383 GEGHNSWVSGVAFDSNWSSP 402
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+ + G D ++++ KL + G L + S DG +GG+D +W + D
Sbjct: 318 LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDR 377
Query: 703 KHLHTLD-HNDIITALCFSPN 762
K + + HN ++ + F N
Sbjct: 378 KVVAWGEGHNSWVSGVAFDSN 398
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+GS D+T+++WD+A G H V +A S + + S DK +K W+ L + K
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 245
Query: 449 YTIQDDGHSDWVSCVRFSPNMPTPL 523
GH V C+ P + L
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVL 270
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
DRT+K+W + LK+ GH G + + VS + S G D + WDL K + +
Sbjct: 191 DRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 250
Query: 721 DHNDIITALCFSPNDTGYVLLS 786
H + C + + T V+L+
Sbjct: 251 -HGHLHGVYCLALHPTLDVVLT 271
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/99 (22%), Positives = 44/99 (44%)
Frame = +1
Query: 469 TQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 648
T +G + + + + S G D+ VK W L K+ ++ GH + + + P +
Sbjct: 209 TGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDV 268
Query: 649 CASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPND 765
+GG+D +WD+ + L H+ + ++ P D
Sbjct: 269 VLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTD 307
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
L+G D R+WD+ K H DV SV + Q+++GS D TIK W+
Sbjct: 270 LTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 421
++GS D T++ WDL GK+ +H K V ++A VS S D K
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 308 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 242
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 243 LSS 251
+S+
Sbjct: 220 VSN 222
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
GH G++ +V P +G D +WD+ G
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +1
Query: 502 TQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 681
T+ P+I+S D T K+W + + I + V+ S +GG D
Sbjct: 147 TRRGPPLIISGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVK 205
Query: 682 LWDLNDGKHLHTLD-HNDIITALCFSPNDTGYVLLSDLPSR 801
+WDL G+ TL+ H D IT + SP D Y+L + + ++
Sbjct: 206 VWDLRKGEATMTLEGHQDTITGMSLSP-DGSYLLTNGMDNK 245
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+SGS D T +LWD+ + F D + + +V+FS +I +G D +K+W+ L +
Sbjct: 155 ISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWD-LRKG 212
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
+ T+ +GH D ++ + SP+
Sbjct: 213 EATMTLEGHQDTITGMSLSPD 233
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
I + G D VKVW L + + GH + +++SPDGS + G D K +WD+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 430
+S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T KLW+
Sbjct: 112 VSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLND 699
IVS D+TV+ W + K HS ++N+ + G L SG D A LWD+
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 700 GKHLHTLDHNDIITALCFS 756
+ T ITA+ FS
Sbjct: 171 RGAIQTFPDKYQITAVSFS 189
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 511 ANPIIVSCGWDRTVKVWHLT-NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
A +I S DR + +W + +CK + GH + + + DGS S D W
Sbjct: 64 AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAW 123
Query: 688 DLNDGKHLHTL-DHNDIITALC 750
D+ GK + + +H+ + + C
Sbjct: 124 DVETGKQIKKMAEHSSFVNSCC 145
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
SGS D+ + LW + K + H +L + ++ D QIVS S DKT++ W+
Sbjct: 70 SGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+G D +++WDL G+ T E H + ++ S D +++ D + +W+
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 478
H V ++ F+ I SGS D+ I LW +CK + GH +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 424
+GS D+ + +WD + +T + HT V F I S S DK I L
Sbjct: 289 AGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKHLHTL-DHNDIITALCFSPNDTG 771
GH + T+ +P G+L ASG D + LW ++ D K+ L H + I L ++ + +
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 772 YVLLS 786
V S
Sbjct: 111 IVSAS 115
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPND 765
SPDG+ +G D +WD + ++ L H + F P +
Sbjct: 281 SPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTE 326
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
S SWD+T+++W +A K H V SV S + SGS D T+K W + K
Sbjct: 223 SASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGK 281
Query: 449 YT 454
YT
Sbjct: 282 YT 283
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN- 696
++ S WDRT+KVW + + K + H +N+V VS ++ SG D W +
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTVKAWKRDQ 278
Query: 697 DGKHL-HTL-----DHNDIITALCFSPN 762
GK+ HTL +TAL S N
Sbjct: 279 QGKYTKHTLMQTLTKQESAVTALAVSKN 306
Score = 27.9 bits (59), Expect = 8.4
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Frame = +2
Query: 170 QRRKQLRYTSKAFIRSFALHF*CCAV**RNYALSGSWDKTLRLWDLAAGKTT--RRFEDH 343
+R KQL Y ++ L C V + SGS DKT+ +W T H
Sbjct: 323 EREKQLNYGG--ILKGHKLAVLCLEVA-GSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 344 TKDVLSVAFSVDNRQ---------IVSGSRDKTIKLW 427
T V +A D + SGS DK++K+W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
NYAL+ D+T+RLW+ G + ++ H ++V V + DN + S D+ + W+ +
Sbjct: 31 NYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWD-V 89
Query: 437 AECKYTIQDDGHSDWVSCVRFS 502
+ + + GH V+ V+F+
Sbjct: 90 STGRVIRKFRGHDGEVNAVKFN 111
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 526 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 705
++CG DRT+++W+ L + H + V V+ D + S G D + WD++ G+
Sbjct: 34 LTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGR 93
Query: 706 HLHTL-DHNDIITALCFSPNDTGYVLLS 786
+ H+ + A+ F ND+ V++S
Sbjct: 94 VIRKFRGHDGEVNAVKF--NDSSSVVVS 119
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
N SCG DR V W ++ ++ GH G +N V + S+ S G D +WD
Sbjct: 72 NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D+ + WD++ G+ R+F H +V +V F+ + +VS D+++++W+
Sbjct: 81 DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 236 CCAV**RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 415
CC + + GS D + WDL K +F H V SV++ +++ S D T
Sbjct: 234 CCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGT 293
Query: 416 IKLW 427
I++W
Sbjct: 294 IRVW 297
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 164
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 523 IVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+V+ G+ D ++++W ++N H G + + + GS+ ASG KD +LWD+
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 700 GKHLHTL-DHNDIITALCF 753
L L H D +T L F
Sbjct: 138 ESGLFRLRGHRDQVTDLVF 156
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHT 717
D TVKV+++ + K ++ GH + + +S DG L +G +D +W L+ G H
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 718 LDHNDIITALCFSPN 762
H D + + F N
Sbjct: 621 FAHGDSVMGVKFVRN 635
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D + LWD+ R H V + F +++VS S+DK +++W+ +
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Query: 449 YTIQDDGHSD 478
I HS+
Sbjct: 183 MQIVSGHHSE 192
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 451
G D ++R+WD G F H V ++ ++ + SGS+D I LW+ + E
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE-SG 140
Query: 452 TIQDDGHSDWVSCVRF 499
+ GH D V+ + F
Sbjct: 141 LFRLRGHRDQVTDLVF 156
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 457
D T++++ + + K H V+ + S D IV+GS+DK +K+W +C +I
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 458 QDDGHSDWVSCVRFSPN 508
H D V V+F N
Sbjct: 621 --FAHGDSVMGVKFVRN 635
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 586 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPND 765
I H GH + +VT+S D +L S + +W+ + G L T+D + +L N
Sbjct: 400 IEHQGHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTIDSGYGLCSLIVPQNK 458
Query: 766 TGYV 777
G V
Sbjct: 459 YGIV 462
Score = 31.9 bits (69), Expect = 0.52
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 475 RLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 654
+L VMC ++ +IV+ D+ +K+W L + H + V +
Sbjct: 582 KLPVMCIDISSDGE-LIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLF 640
Query: 655 SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFS 756
S GKD WD + +HL TL+ H+ I L S
Sbjct: 641 SIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAIS 675
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
+Y S D+ ++ WD + E H ++ +A S +V+GS D++++ W+
Sbjct: 637 HYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Query: 437 AE 442
E
Sbjct: 697 EE 698
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 72 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 242
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLV 155
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+ S G DR VK W + + GH + + +S G +G D WD ++
Sbjct: 639 LFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE 697
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 350 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 502
DVL+VA S D + I D T+K++ + K+ + GH V C+ S
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDIS 591
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 690
N ++S D +V++W + C+ + H+ Y+ +V +P D SG D K +W
Sbjct: 367 NNRLLSASVDNSVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWS 425
Query: 691 LNDGKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + + D I+TA+C+ P+ ++
Sbjct: 426 ASQCQVVDWADARGIVTAVCYQPDGQAVII 455
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 496
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 497 FSP 505
F+P
Sbjct: 404 FNP 406
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 433
N LS S D ++RLW + F H V SV F+ VD+ +SGS D +++W+
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA 426
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
++C+ D V+ V + P+
Sbjct: 427 -SQCQVVDWADARG-IVTAVCYQPD 449
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 595 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGY 774
LGHSG + ++ S + L S D LW + L HN+ +T++ F+P D +
Sbjct: 353 LGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDH 411
Query: 775 VLLSDLPSR 801
+ + +
Sbjct: 412 FISGSIDGK 420
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 72 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 690
N ++S D +V++W + C+ + H+ Y+ +V +P D SG D K +W
Sbjct: 367 NNRLLSASVDNSVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWS 425
Query: 691 LNDGKHLHTLDHNDIITALCFSPNDTGYVL 780
+ + + D I+TA+C+ P+ ++
Sbjct: 426 ASQCQVVDWADARGIVTAVCYQPDGQAVII 455
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 496
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 497 FSP 505
F+P
Sbjct: 404 FNP 406
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 433
N LS S D ++RLW + F H V SV F+ VD+ +SGS D +++W+
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA 426
Query: 434 LAECKYTIQDDGHSDWVSCVRFSPN 508
++C+ D V+ V + P+
Sbjct: 427 -SQCQVVDWADARG-IVTAVCYQPD 449
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 595 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGY 774
LGHSG + ++ S + L S D LW + L HN+ +T++ F+P D +
Sbjct: 353 LGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDH 411
Query: 775 VLLSDLPSR 801
+ + +
Sbjct: 412 FISGSIDGK 420
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 72 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 440 E-CKYTIQDDG 469
E C+ ++ G
Sbjct: 152 EKCQGLLRVQG 162
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 469 TQRLGVMCQILTQYANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 642
+++ GV T + +I S GWD ++++ L + K GH + ++++ G
Sbjct: 73 SKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGG 132
Query: 643 SLCASGGKDMKAMLWD 690
SG D +LWD
Sbjct: 133 ECFISGSLDRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 440 E-CKYTIQDDG 469
E C+ ++ G
Sbjct: 149 EKCQGLLRVQG 159
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 469 TQRLGVMCQILTQYANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 642
+++ GV T + +I S GWD ++++ L + K GH + ++++ G
Sbjct: 70 SKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGG 129
Query: 643 SLCASGGKDMKAMLWD 690
SG D +LWD
Sbjct: 130 ECFISGSLDRTVLLWD 145
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
D LR++D + K + + +L A+S+D + +++G D +++W+ + + K
Sbjct: 324 DGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKVVAW 382
Query: 461 DDGHSDWVSCVRFSPNMPTP 520
+GH+ WVS V F +P
Sbjct: 383 GEGHNSWVSGVAFDSYWSSP 402
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Frame = +1
Query: 466 WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 645
W G + I + + G D ++++ + KL + G L S DG
Sbjct: 299 WHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGK 358
Query: 646 LCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCF-----SPNDTG 771
+GG+D +W + D K + + HN ++ + F SPN G
Sbjct: 359 YLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEG 406
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 424
RN S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 246 RNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLW 427
N +GS D+T++LWDL+ + + + + +AFS DN +++ G +KLW
Sbjct: 383 NLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLW 442
Query: 428 NTLAE 442
+TL++
Sbjct: 443 DTLSD 447
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 60 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 179
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWD 690
DRTVK+W L+N + H ++G L + SPD L A GG + LWD
Sbjct: 391 DRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+ + D W + + K+K+ GHS YL+TV S +G +D A +WD G
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Query: 703 KHLHTLDHND 732
K + + D
Sbjct: 234 KCVKVIGSQD 243
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 290 LRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTI 457
+ LWDLA K +F H +K V+ F +D+ I SGS D + +WN L K
Sbjct: 421 IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWN-LKNTKPLE 479
Query: 458 QDDGHSDWVSCVRFSPNMPTPL 523
GHS V+CV ++P P L
Sbjct: 480 VLSGHSMTVNCVSWNPKNPRML 501
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 427
++ SGS D + +W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 456 SFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.7 bits (76), Expect = 0.073
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = +1
Query: 541 DRTVKVWH-LTNCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 711
D T +W L + K+++ H H ++ V+ SPD + + G LWD++ G
Sbjct: 245 DCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLR 304
Query: 712 HTLDHND---IITALCFSPNDTGYVLLSDLPSR 801
HT +N+ +++ + P+ T V S P R
Sbjct: 305 HTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPER 337
Score = 34.3 bits (75), Expect = 0.097
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 637 DGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPND 765
D S ASG +D + +W+L + K L L H+ + + ++P +
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKN 497
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 134 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV**RNYAL-SGSWDKTLRLWDLA 310
L R +S E K + + IR A CC+ L S DK + +W++
Sbjct: 482 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 538
Query: 311 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 490
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 539 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 598
Query: 491 VRFSP 505
+ F P
Sbjct: 599 IDFHP 603
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 657
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 633 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 692
Query: 658 GGKDMKAMLWDLNDGKHLHTLDHN 729
+D LW L+ G +H L ++
Sbjct: 693 VSED-AVKLWSLSSGDCIHELSNS 715
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDT 768
S DG L AS G D K +W++ + T +H IIT + F PN T
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 563
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 695 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 754
Query: 461 DDGHSDWVSCVRFSPN 508
GH +S + SP+
Sbjct: 755 --GHECVISALAQSPS 768
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLW 687
N +V+ + VK+W L++ I+ L +SG ++V P L GG LW
Sbjct: 686 NGELVASVSEDAVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELW 743
Query: 688 DLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
+ + K + H +I+AL SP+ TG V
Sbjct: 744 NTMENKCMTVAGHECVISALAQSPS-TGVV 772
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 134 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV**RNYAL-SGSWDKTLRLWDLA 310
L R +S E K + + IR A CC+ L S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 311 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 490
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 491 VRFSP 505
+ F P
Sbjct: 601 IDFHP 605
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 657
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 658 GGKDMKAMLWDLNDGKHLHTLDHN 729
+D LW L+ G +H L ++
Sbjct: 695 VSED-AVKLWSLSSGDCIHELSNS 717
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDT 768
S DG L AS G D K +W++ + T +H IIT + F PN T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 461 DDGHSDWVSCVRFSPN 508
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLW 687
N +V+ + VK+W L++ I+ L +SG ++V P L GG LW
Sbjct: 688 NGELVASVSEDAVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELW 745
Query: 688 DLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
+ + K + H +I+AL SP+ TG V
Sbjct: 746 NTMENKCMTVAGHECVISALAQSPS-TGVV 774
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 134 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV**RNYAL-SGSWDKTLRLWDLA 310
L R +S E K + + IR A CC+ L S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 311 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 490
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 491 VRFSP 505
+ F P
Sbjct: 601 IDFHP 605
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 657
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 658 GGKDMKAMLWDLNDGKHLHTLDHN 729
+D LW L+ G +H L ++
Sbjct: 695 VSED-AVKLWSLSSGDCIHELSNS 717
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDT 768
S DG L AS G D K +W++ + T +H IIT + F PN T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 461 DDGHSDWVSCVRFSPN 508
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLW 687
N +V+ + VK+W L++ I+ L +SG ++V P L GG LW
Sbjct: 688 NGELVASVSEDAVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELW 745
Query: 688 DLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
+ + K + H +I+AL SP+ TG V
Sbjct: 746 NTMENKCMTVAGHECVISALAQSPS-TGVV 774
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 134 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV**RNYAL-SGSWDKTLRLWDLA 310
L R +S E K + + IR A CC+ L S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 311 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 490
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 491 VRFSP 505
+ F P
Sbjct: 601 IDFHP 605
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 657
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 658 GGKDMKAMLWDLNDGKHLHTLDHN 729
+D LW L+ G +H L ++
Sbjct: 695 VSED-AVKLWSLSSGDCIHELSNS 717
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDT 768
S DG L AS G D K +W++ + T +H IIT + F PN T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 461 DDGHSDWVSCVRFSPN 508
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLW 687
N +V+ + VK+W L++ I+ L +SG ++V P L GG LW
Sbjct: 688 NGELVASVSEDAVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELW 745
Query: 688 DLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
+ + K + H +I+AL SP+ TG V
Sbjct: 746 NTMENKCMTVAGHECVISALAQSPS-TGVV 774
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 134 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAV**RNYAL-SGSWDKTLRLWDLA 310
L R +S E K + + IR A CC+ L S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 311 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 490
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 491 VRFSP 505
+ F P
Sbjct: 601 IDFHP 605
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 657
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 658 GGKDMKAMLWDLNDGKHLHTLDHN 729
+D LW L+ G +H L ++
Sbjct: 695 VSED-AVKLWSLSSGDCIHELSNS 717
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNDT 768
S DG L AS G D K +W++ + T +H IIT + F PN T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 461 DDGHSDWVSCVRFSPN 508
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLW 687
N +V+ + VK+W L++ I+ L +SG ++V P L GG LW
Sbjct: 688 NGELVASVSEDAVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELW 745
Query: 688 DLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
+ + K + H +I+AL SP+ TG V
Sbjct: 746 NTMENKCMTVAGHECVISALAQSPS-TGVV 774
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y + S DKT+++W+L K + H + V FS+D +V+ S D T +LW+ A
Sbjct: 231 YLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
N + + D+TVK+W+L KL+ GH ++ S DG + D A LW +
Sbjct: 229 NKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSM 288
Query: 694 NDGK 705
GK
Sbjct: 289 RAGK 292
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 290 LRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 448
+RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
SGS D ++++WDL + R F V +V + +++SG ++ I++W+ A+
Sbjct: 101 SGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRAD 157
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 329 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 502
+ + H +L S N+ + + S DKT+K+WN L K GH WV FS
Sbjct: 212 KLQAHNSHILKCLLSPGNKYLATASSDKTVKIWN-LDGFKLEKVLTGHERWVWDCDFS 268
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 505 QYANPIIVSCGWDRTVKVWHLT--NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 678
QY ++ S D +VK+W L C+ + + +NTV + P+ + SG ++
Sbjct: 93 QYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP---VNTVVLHPNQTELISGDQNGNI 149
Query: 679 MLWDL 693
+WDL
Sbjct: 150 RVWDL 154
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTK 349
Y ++ S D T RLW + AGK ++ H K
Sbjct: 273 YLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 418
RN S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 278 RNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLW 427
N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G + +W
Sbjct: 418 NLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVW 477
Query: 428 NTLAE 442
+TL +
Sbjct: 478 DTLLD 482
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAEC 445
S S D TLR+WD+ +T H ++LS ++ D+ + + S DKT+K+W+ +
Sbjct: 167 SASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYR 226
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
+GH V V+FSP+
Sbjct: 227 VPLAVLNGHGYAVRKVKFSPH 247
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 430
R+ L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+
Sbjct: 119 RDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 505 QYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKA 678
+Y + I+ + D+TVKVW + + ++ + L GY + V SP SL AS DM
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSV 261
Query: 679 MLWD 690
LWD
Sbjct: 262 CLWD 265
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 60 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 197
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +1
Query: 466 WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 642
W + + + ++ S WDRT+K+W T+ K L+ H +N V +S +G
Sbjct: 161 WVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENG 220
Query: 643 SLCASGGKDMKAMLW--DLND----GKHLHTL-----DHNDIITALCFS 756
+ +G D + +W ++N+ K H+L +HN I AL S
Sbjct: 221 DI-YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALS 268
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
S SWD+TL++W K F + D ++ +N I +GS D+ IK+W
Sbjct: 182 SVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVW 234
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
SG D ++ +W+ G HT+ VL +A D + SGS DKT++LW A
Sbjct: 277 SGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWKCSA 334
Query: 440 -ECKYTIQDDGHSDWVSCV 493
+ +GH V C+
Sbjct: 335 KDYSCLAMLEGHLGPVKCL 353
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Frame = +1
Query: 541 DRTVKVWHLT----NCKLKINHL------GHSGYLNTVTVS-PDGSLCASGGKDMKAMLW 687
D+ +KVW N K K H H+ +N + +S +GSL SGG D ++W
Sbjct: 228 DQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVW 287
Query: 688 DLNDG 702
+ +DG
Sbjct: 288 ERDDG 292
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 583 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH--TLDHNDIITALCFS 756
K + + H ++ + +S DG+L S D +W D K L T H+D I A+ S
Sbjct: 158 KASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS 217
Query: 757 PNDTGYVLLSD 789
N Y SD
Sbjct: 218 ENGDIYTGSSD 228
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 508
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALSEN 219
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 242
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 243 LSSDVI 260
+ SD++
Sbjct: 313 VVSDIL 318
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +2
Query: 131 FLSRQNSHRVEADQR----RKQLRYTSKAFIRSFALHF*CCAV**RNYAL-SGSWDKTLR 295
FLS+++ + +A R K +T +R+ CC L S DK
Sbjct: 617 FLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAV 676
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-DG 469
LW K E+HT + + FS ++ + S DKT+++W+ A+ K Y+++ G
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMG 734
Query: 470 HSDWVSCVRFSP 505
HS V+ + F P
Sbjct: 735 HSSMVTSLDFHP 746
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN 762
S DG + AS G D KA+LW + K TL +H +IT + FSP+
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPS 704
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL---NDGKHLHTLDHN 729
GH+ +N+V P G AS +DM +W L ++G+ +H L N
Sbjct: 816 GHANPINSVCWDPSGDFLASVSEDM-VKVWTLGTGSEGECVHELSCN 861
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 511 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
A P ++ G +++++W+++ K + H G + ++ VS L AS D LW
Sbjct: 873 AYPSLLVIGCYQSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 227
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 228 I 230
+
Sbjct: 69 V 69
Score = 35.5 bits (78), Expect = 0.042
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KLW +
Sbjct: 127 VSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KG 179
Query: 446 KYTIQD-DGHSDWVSCVRFSPNM 511
K ++Q GH+D V + P++
Sbjct: 180 KTSLQTLSGHTDTVRGLAVMPDL 202
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 227
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 228 I 230
+
Sbjct: 69 V 69
Score = 35.5 bits (78), Expect = 0.042
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KLW +
Sbjct: 127 VSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KG 179
Query: 446 KYTIQD-DGHSDWVSCVRFSPNM 511
K ++Q GH+D V + P++
Sbjct: 180 KTSLQTLSGHTDTVRGLAVMPDL 202
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 598 GHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFS 756
GH G L + SP D +L A+GG D KA LW + +G L H D ++ L FS
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS 122
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDH---TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+GS D +L +W+ ++ + H T+ + + + ++ +SGS+D ++ + N +
Sbjct: 214 TGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVT 273
Query: 440 ECKYTIQDDGHSDWVSCVRFSPNMPT 517
K + H+D V CV+FSP+ T
Sbjct: 274 G-KVVSSLNSHTDSVECVKFSPSSAT 298
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +1
Query: 481 GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---LC 651
G+ C + ++ + +S D +V + ++ K+ + H+ + V SP + L
Sbjct: 244 GLTCLDINSNSS-LAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLA 302
Query: 652 ASGGKDMKAMLWDLNDGKHLHTLDHNDIITAL 747
A+GG D K ++WDL +H + +T+L
Sbjct: 303 ATGGMDKKLIIWDLQHSTPRFICEHEEGVTSL 334
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 263 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTIKLWN 430
A+SGS D ++ + ++ GK HT V V FS + I +G DK + +W+
Sbjct: 257 AISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWD 315
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ + G D +W + N GH ++ + S DG L ASGG D ++D +
Sbjct: 85 LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASS 144
Query: 700 GKHLHTLD 723
G LD
Sbjct: 145 GTLKCVLD 152
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+G D LW + G H V +AFS D + + SG D +++++ +
Sbjct: 88 TGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTL 147
Query: 449 YTIQDDGHSDWVSCVRFSP 505
+ DG + VR+ P
Sbjct: 148 KCVL-DGPGAGIEWVRWHP 165
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
Y +G + T+ +WD G + H V +++ S + IVS S D T +++ +
Sbjct: 342 YLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+G D T L+D +G+ H+K V S+ F D +++ S DKT+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 298
Query: 449 YT 454
YT
Sbjct: 299 YT 300
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRDKT 415
L+ S DKT+R+W + G T R +DH+ +V +V N+ VS S D T
Sbjct: 280 LTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDST 332
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 550 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 729
VK+W + + GH+G + +++ S +G A+ D LWDL K+ T D
Sbjct: 378 VKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLKNFRTFDFP 436
Query: 730 D 732
D
Sbjct: 437 D 437
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 182
++ TL GH+ VT I D++L++S DKT+ +W + D N
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSEDGN 298
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 454 HPR*WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 633
HP T + G+ + ++ +I + G D T ++ + ++ GHS + ++
Sbjct: 215 HPLHKTNKPGIFSMDIL-HSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFV 273
Query: 634 PDGSLCASGGKDMKAMLWDLN-DGKHL--HTL-DHNDIITALCFSPNDTGYVLLS 786
D L + D +W + DG + HTL DH+ + A+ + +V S
Sbjct: 274 GDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSAS 328
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Frame = +1
Query: 529 SCGWDRTVKVWHLTNCK-------------LKIN------HLGHSGYLNTVTVSPDGSLC 651
SC D TVKVW T C ++I + GH + +V P SL
Sbjct: 224 SCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLL 283
Query: 652 ASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN 762
SGGKD LWD G+ L +L H +I+ ++ ++ N
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQN 321
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/84 (26%), Positives = 45/84 (53%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
++ +SG D+ ++LWD +G+ H VLSV ++ + +++ S+D+ IKL++
Sbjct: 280 KSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD- 338
Query: 434 LAECKYTIQDDGHSDWVSCVRFSP 505
+ K GH+ V+ + + P
Sbjct: 339 IRTMKELQSFRGHTKDVTSLAWHP 362
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++VS G D+ VK+W + + + GH + +V + +G+ + KD L+D+
Sbjct: 282 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRT 341
Query: 700 GKHLHTL-DHNDIITALCFSP 759
K L + H +T+L + P
Sbjct: 342 MKELQSFRGHTKDVTSLAWHP 362
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
NY +SG TL+ W H + + ++F + + S S D T+K+W+
Sbjct: 178 NYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 508
H DV SV + +VSG +D+ +KLW+T + + GH + V V+++ N
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSG-RELCSLHGHKNIVLSVKWNQN 321
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 42 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 197
T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIP 392
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
I +CG D V + K +H HS ++N + SPDG+ + D K M++D G
Sbjct: 24 IATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 83
Query: 703 KHLHTL----DHNDIITALCFSPNDTGYVLLS 786
+ L H I A+ +SP+ + +S
Sbjct: 84 DKVGELASEDGHKGSIYAVSWSPDSKRVLTVS 115
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDGKHLHTLDHNDIITALCFSPND 765
H G L + SPD ++ ASG + +A++WD K + L H I +L +SPN+
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 508
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSPD 62
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +2
Query: 335 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
+ H + +V++S D++++++ S DK+ K+W
Sbjct: 93 DGHKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC--FSPNDTG 771
GH G +N + + +GSL SG D++ +W+ + K LH++D C F P +
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSD 107
Query: 772 YVLLS 786
+++S
Sbjct: 108 ELVVS 112
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 506 NMPTPLLYPVVG 541
L+ G
Sbjct: 104 ETSDELVVSGAG 115
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAF--SVDNRQIVSGSRDKTIKLWNT 433
+SGS D + +W+ ++ K + HT ++ F + +VSG+ D ++L+NT
Sbjct: 66 ISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLFNT 124
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH G + + + + AS D A LWD G LH+ +H I+ A FS DT Y+
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS-QDTKYL 117
Query: 778 L 780
+
Sbjct: 118 I 118
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N ++G D +RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 241 NKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 547 TVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH-TL 720
TVK W + L + + + ++ P G+ +GG+DM L+D + GK +
Sbjct: 209 TVKFWDANHFGL-VKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNK 267
Query: 721 DHNDIITALCFSPNDTGY 774
H+ + + F+P Y
Sbjct: 268 GHHGPVHCVRFAPTGESY 285
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
S SWD T+++W +A K H + SV D+ + +GS D T+K+W + K
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGK 310
Query: 449 YT 454
T
Sbjct: 311 GT 312
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW--DL 693
++ S WD T+KVW + + K + H +N+V +S L +G D +W +L
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVFTGSADGTVKVWKREL 307
Query: 694 NDGKHLHTL 720
HTL
Sbjct: 308 QGKGTKHTL 316
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +1
Query: 547 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 726
TV +W T+ + H G +++V P+G L A+ GK+ K +WDL + + T+ H
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-H 320
Query: 727 NDIITALCFS 756
+ L FS
Sbjct: 321 SFHAKTLSFS 330
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGSWDKT ++W ++ + H +D ++ S + + +GS D T+K+W + K
Sbjct: 228 SGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAK 286
Query: 449 YT 454
T
Sbjct: 287 DT 288
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ S WD+T KVW +++ + + H +N V DG L +G D +W D
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVFTGSADGTVKVWRRED 283
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 493
H + +A S D R + SGS DKT K+W +++ + + H D V+ V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV 259
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGS D T+ +W++ G T H V V + I S S DKT+ +W T ++
Sbjct: 135 SGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRT-SDWG 193
Query: 449 YTIQDDGH 472
+ DGH
Sbjct: 194 MAHRTDGH 201
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 302 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 481
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 482 VSCVRFSP 505
V V + P
Sbjct: 163 VKGVTWDP 170
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ S D TV +W++ GH + VT P GS AS D ++W +D
Sbjct: 132 MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSD 191
Query: 700 GKHLHTLD 723
H D
Sbjct: 192 WGMAHRTD 199
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 571 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 747
N K + GH+ + + SPD S+ ASG D +W++ G L H ++ +
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 748 CFSP 759
+ P
Sbjct: 167 TWDP 170
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 164
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
IV+CG D V + K K++ HS ++N V +PDGS + D K +++D
Sbjct: 160 IVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTC 219
Query: 703 KHLHTLD----HNDIITALCFSPN 762
+ L L H I A+ +SP+
Sbjct: 220 EILGELSSDDGHKGSIYAVSWSPD 243
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDGKHLHTLDHNDIITALCFSPNDT 768
H G ++ + SPD S+ AS + +A++WD + K + L H+ I L +SPN T
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNST 547
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGH 472
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 473 SDWVSCVRFSPN 508
S++V+CVRF+P+
Sbjct: 187 SNFVNCVRFAPD 198
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
GH G + V+ SPDG + D A +WD++D
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
+ S +R VW + ++K+ N L HS +N + SP+ ++ A+G D ++++++
Sbjct: 505 MFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 335 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+ H + +V++S D +Q+++ S DK+ K+W+
Sbjct: 229 DGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 430
++ S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 546 KSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 YANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAML 684
Y + S ++ V+VW + +L H + ++ S D +L ASG D L
Sbjct: 544 YIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKL 603
Query: 685 WDLNDGKHLHTLDHNDIITALCFSPNDTG 771
W +N G + T+ I + F P++TG
Sbjct: 604 WSINQGVSIGTIKTKANICCVQF-PSETG 631
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
GS D + +DL K H K V V F VD+ +VS S D T+KLW+
Sbjct: 637 GSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 430
++ S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 546 KSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 YANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAML 684
Y + S ++ V+VW + +L H + ++ S D +L ASG D L
Sbjct: 544 YIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKL 603
Query: 685 WDLNDGKHLHTLDHNDIITALCFSPNDTG 771
W +N G + T+ I + F P++TG
Sbjct: 604 WSINQGVSIGTIKTKANICCVQF-PSETG 631
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
GS D + +DL K H K V V F VD+ +VS S D T+KLW+
Sbjct: 637 GSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLWN 430
++GS D ++ ++DL A + + R HT DV +V F+ ++ I+SGS D K+W+
Sbjct: 245 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 424
N LSGS D ++WD + K H + V + D R +S +D+TIKL
Sbjct: 285 NLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKL 344
Query: 425 WN 430
W+
Sbjct: 345 WD 346
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAMLWD 690
+V+ D ++ V+ L ++ + + H+ +NTV + + G+L SG D +WD
Sbjct: 244 VVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +1
Query: 475 RLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 654
R GV C I S D +++W +++ + GH G + +T S DG++
Sbjct: 56 RDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLV 115
Query: 655 SGGKDMKAMLWDL 693
S G D LW++
Sbjct: 116 SCGTDCTVRLWNV 128
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
++GS+D+++R++ G + + HTK V V +S D ++SGS D ++LW
Sbjct: 295 VTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAK 352
Query: 437 A 439
A
Sbjct: 353 A 353
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 57 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 170
G + GH V+ +A NP Y I S+S D + +W ++
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDIS 87
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
SGSWDKTL++W L+ K + H D ++ + D R + S S D +K+W
Sbjct: 189 SGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGDGR-VYSASADGKVKIW 239
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 454 HPR*WTQRL-GVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 630
H R W + + C L +A II S WD+T+KVW L++ K + H +N + V
Sbjct: 166 HKRLWIEHADSISC--LAVHAG-IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-V 221
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHT 717
+ DG + S D K +W K + +
Sbjct: 222 AGDGRV-YSASADGKVKIWGKEKRKQIES 249
Score = 34.3 bits (75), Expect = 0.097
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFS 502
FE ++ + V + SGS DK+I LW T CK+ + GH V C++ S
Sbjct: 312 FETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQAS 370
Query: 503 PN 508
PN
Sbjct: 371 PN 372
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 430
L+ S D+T+++WD+ K T HT V S+ N +VSGSRD LW+
Sbjct: 144 LTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 460 R*WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 639
R W + I + +++ D+T+KVW + K +GH+G + ++ P
Sbjct: 122 RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPT 181
Query: 640 GS-LCASGGKDMKAMLWDL 693
S L SG +D LWDL
Sbjct: 182 NSDLLVSGSRDGCFALWDL 200
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 39 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 628 VSPDGSLCASGGKDMKAMLWDLNDGK--HLHTLDHNDIITALCFSPNDTGYV 777
+SPDG SG D A +W +N + + H+ +TA+ +SP++ G V
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKV 397
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Frame = +2
Query: 281 DKTLRLWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAE 442
D+ L +WDL +A K + H+ +V +AF+ N +V+ GS DKT+KL++ L+
Sbjct: 249 DQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST 308
Query: 443 CKYTIQDDGHSDWVSCVRFSPNMPTPLLYPVVGTEL 550
+T D H + V V ++P T L +G L
Sbjct: 309 ALHTF--DSHKEEVFQVGWNPKNETILASCCLGRRL 342
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 60 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
S S D T+R WD + + R + + +++ S ++ +++G + + LW+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 446 KYTIQDDGHSDWVSCVRFSPNMPTPLL 526
+ ++ H D V+ V F PN P LL
Sbjct: 164 QVACLEESHMDDVTQVHFVPNKPNKLL 190
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 260 YALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
+ +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +W+
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDK 926
Query: 434 LAECKYTIQDDGHSDWVSCVR 496
+ + GH VSCV+
Sbjct: 927 -QTTQLLEELKGHDSQVSCVK 946
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 457
D +WD+ +GK + + HTK + S+ D +++GS D T ++W+ + C +
Sbjct: 1001 DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVL 1058
Query: 458 QDDGHSDWVSCVRFSP 505
H+ V V +SP
Sbjct: 1059 A--CHAGPVQSVEYSP 1072
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGH-SGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
+++ D TVK+W + + + +G S + ++ + A+ G+D A +WD+
Sbjct: 953 VLTAAHDGTVKMWDVRT-DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS 1011
Query: 700 GKHLHTL 720
GK +H L
Sbjct: 1012 GKQMHKL 1018
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
I+ + G D +W + + K GH+ ++ ++ + D + +G D A +W ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLI--TGSDDWTARVWSVSR 1051
Query: 700 GKHLHTLD-HNDIITALCFSPNDTGYV 777
G L H + ++ +SP D G +
Sbjct: 1052 GSCDAVLACHAGPVQSVEYSPFDKGII 1078
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 48 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
+LR TL+GH G V I+++ I+S S D ++IVW
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW 924
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
SGS DKT+++WDL + + HT V S+ ++ ++S S D TIK+W
Sbjct: 273 SGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIKVW 323
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 335 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 460
E H+ +V F+V + + SGS DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 747
GHSG + V G + SG D +WDLN + + TL H +T+L
Sbjct: 256 GHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
S+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 245 SDPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 427
++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 190 ITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 427
++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 282 ITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 337
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
SGS DK++ D+ + + H +V + +S DNR++ SG D + +WN
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ-HST 367
Query: 446 KYTIQDDGHSDWVSCVRFSPNM 511
+ ++ H+ V + +SP++
Sbjct: 368 QPVLKYSEHTAAVKAIAWSPHV 389
Score = 34.3 bits (75), Expect = 0.097
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 469
+++WD + K TR E H V ++A+ + + SGSRDK+I + + + + G
Sbjct: 276 VQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDIRCQEDHVSKLAG 333
Query: 470 HSDWVSCVRFS 502
H V +++S
Sbjct: 334 HKSEVCGLKWS 344
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 38.3 bits (85), Expect = 0.006
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Frame = +1
Query: 484 VMCQILTQYANPIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVSPDGSLC 651
V C + + ++V+ +D TVKVW H +N +IN H + V P G L
Sbjct: 181 VRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEIN---HGLPVEDVVYLPSGGLI 237
Query: 652 A-SGGKDMKAMLWDL-NDGKHLHTLD-HNDIITAL 747
A +GG +K +WDL GK + +++ HN +T+L
Sbjct: 238 ATAGGNSVK--VWDLIGGGKMVCSMESHNKTVTSL 270
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTL 436
+ +SG D ++ WD+A H V S V++ +V+GS D T+K+W+
Sbjct: 150 HLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
Query: 437 AECKYTIQDDGHSDWVSCVRFSPN 508
I + H V V + P+
Sbjct: 210 VHTSNWIAEINHGLPVEDVVYLPS 233
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 690
+VS G D VK W + + + LGH Y+ SP + S+ +G D +WD
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 466
++++D+ R H+ V + V D +VSG D +K W+ T+ D
Sbjct: 117 VQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGA---TVISD 173
Query: 467 --GHSDWVSCVRFSP 505
GH D+V C SP
Sbjct: 174 LLGHKDYVRCGDCSP 188
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH G + + + + AS D A LWD G LH+ +H I+ A FS DT +
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS-EDTKSL 117
Query: 778 L 780
L
Sbjct: 118 L 118
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH G + + + + AS D A LWD G LH+ +H I+ A FS DT +
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS-EDTKSL 117
Query: 778 L 780
L
Sbjct: 118 L 118
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 687
++ S WDRTVKVW + + K + H +N+VT + SL +G D +W
Sbjct: 149 LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGSADGTVKVW 202
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
S SWD+T+++W + K + H V SV + + +GS D T+K+W
Sbjct: 152 SASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVFTGSADGTVKVW 202
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y S S D+T +W+++A H K V+++ +S D+RQ+++ ++ I+ W+
Sbjct: 288 YLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWD 347
Query: 431 T-LAECKYTIQDDGHSDWVSC 490
+C + + G S +SC
Sbjct: 348 VDSGDCVHMYEKGGISP-ISC 367
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 YANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAML 684
Y I S D V +WH + KL + GH+G +N V+ SP + AS D +
Sbjct: 499 YKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRI 558
Query: 685 WDLN 696
W L+
Sbjct: 559 WGLD 562
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAG-KTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKLW 427
Y L ++ +RLW++ K R++ H + + S I SGS D + +W
Sbjct: 457 YILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIW 516
Query: 428 NTLAECKYTIQDDGHSDWVSCVRFSP 505
+ + K ++ GH+ V+CV +SP
Sbjct: 517 HR-STGKLIVELPGHAGAVNCVSWSP 541
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 490
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 491 VRFSPN 508
+ +SP+
Sbjct: 325 ILWSPD 330
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 427
+ SGS D + +W + GK H V V++S N + S S D TI++W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 81 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 176
W Q + N KY + SSS+D+T I+W+++ D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD 306
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLT---NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
+ S D+T +W ++ + LK +GH + + SPD + G + WD+
Sbjct: 289 LASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDV 348
Query: 694 NDGKHLHTLDHNDIITALC-FSPNDTGYV 777
+ G +H + I C + P+ G +
Sbjct: 349 DSGDCVHMYEKGGISPISCGWYPDGQGII 377
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
D + L+D A T R + + S + S DN+ I+ ++ I+LWN + K +
Sbjct: 424 DSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSR 481
Query: 461 DDGH 472
GH
Sbjct: 482 YKGH 485
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 42 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
T KL L GH G V ++ +P M+ S+S D T+ +W L R
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PDGSLCASGGKDMKAMLWDLN 696
+++CG + ++ W + + H+ G ++ ++ PDG +G D +WDL
Sbjct: 334 VLTCGAEEVIRRWDVDSGDCV--HMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDL- 390
Query: 697 DGK 705
DG+
Sbjct: 391 DGR 393
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
G D +++L KT H V +A S DN +V+GSRD T+ LW
Sbjct: 2644 GHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 541 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
D ++K+ K GH + + +SPD + +G +D +LW ++
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH 2698
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL---AECKYTIQD 463
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 464 DGHSDWVSCVRFSPN 508
HS V FSP+
Sbjct: 392 VNHSRAVHSAYFSPS 406
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH G + + ++ + AS D A +W+ G LH+ +H I+ A FS DT +
Sbjct: 54 GHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFS-EDTHRL 112
Query: 778 L 780
L
Sbjct: 113 L 113
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDLN 696
+++ G ++ ++++ L +G+S G + TV + D ++ +S LWD+
Sbjct: 112 LLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIR 171
Query: 697 DGKHLHTLDHNDIITALCFSPNDTGYVLLSD 789
K +HTL+ +T+ S D Y+ +D
Sbjct: 172 SDKIVHTLETKSPVTSAEVS-QDGRYITTAD 201
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 436
+ +S S D L + G FE H V S + + + S S D T K+WN L
Sbjct: 28 FLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNAL 86
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
N ++G D + +D G+ + H V V ++ SGS D T+++W
Sbjct: 236 NTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 323 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 493
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 494 RFSP 505
+ P
Sbjct: 73 CWDP 76
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 424
+ S DK++RLWD +GK T++ E +++ ++ + D + G+RD + +
Sbjct: 84 TASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELTI 134
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-----NDGKHLHTLDHNDIITALCFSPN 762
GH +++V + +G+ ASG D A +W++ + K L H D + LC+ P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 763 DTGYV 777
+ V
Sbjct: 78 HSDLV 82
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT 433
SGS D+T R+W++ ++ + HT V + + + +V + S DK+++LW+
Sbjct: 37 SGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA 96
Query: 434 LA-ECKYTIQDDGHS 475
+ +C ++ G +
Sbjct: 97 RSGKCTQQVELSGEN 111
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
G D ++++W L G +R + HT D+ SV FS D R ++S S D ++K+W+
Sbjct: 345 GVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 285 NRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTT 325
+GS D+TLR+WD A+G+ T
Sbjct: 168 TGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 39 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 362 VAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQD 463
V V ++ SGS DKTIK+W+ +C T+ D
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTD 312
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
SGS DKT+++WDL + + H V S+ ++ ++S S D TIKLW
Sbjct: 327 SGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIKLW 377
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 368 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 460
F V + SGS DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 454
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 455 IQDDGHSDWVSCVRFSPNMPT 517
GH V + ++ ++ T
Sbjct: 219 TLKGGHQSRVGSLAWNNHILT 239
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Frame = +2
Query: 269 SGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIK 421
SG D + +WD ++ TT+ R E+HT V ++A+ +++ G D+TIK
Sbjct: 283 SGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIK 342
Query: 422 LWNT 433
WNT
Sbjct: 343 FWNT 346
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 460
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 305
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 499 LTQYANPIIVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDM 672
L + + +++ D TV +W + + G + ++ +PDG A G +
Sbjct: 145 LLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNS 204
Query: 673 KAMLWDLNDGKHLHTL 720
+ LWD + L TL
Sbjct: 205 EVQLWDSASNRQLRTL 220
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 454
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 455 IQDDGHSDWVSCVRFSPNMPT 517
GH V + ++ ++ T
Sbjct: 209 TLKGGHQSRVGSLAWNNHILT 229
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Frame = +2
Query: 269 SGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIK 421
SG D + +WD ++ TT+ R E+HT V ++A+ +++ G D+TIK
Sbjct: 273 SGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIK 332
Query: 422 LWNT 433
WNT
Sbjct: 333 FWNT 336
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 460
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 295
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 499 LTQYANPIIVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDM 672
L + + +++ D TV +W + + G + ++ +PDG A G +
Sbjct: 135 LLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNS 194
Query: 673 KAMLWDLNDGKHLHTL 720
+ LWD + L TL
Sbjct: 195 EVQLWDSASNRQLRTL 210
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
SGS DK++ D+ + + + H ++ + +S DNR++ SG D + +WN
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQ-HST 324
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
+ ++ H+ V + +SP+
Sbjct: 325 QPVLRFCEHAAAVKAIAWSPH 345
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +1
Query: 487 MCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGG 663
+C + N + S G D + VW+ + + + H+ + + SP L ASGG
Sbjct: 295 ICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGG 354
Query: 664 --KDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 762
D W+ HL+ +D N + L +S N
Sbjct: 355 GTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKN 389
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 451
G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I + + +
Sbjct: 227 GTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDH 284
Query: 452 TIQDDGHSDWVSCVRFS 502
+ GH + +++S
Sbjct: 285 VSKLKGHKSEICGLKWS 301
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH-LHTLDHNDIITALCFSPNDTG 771
GH + + S D ASGG D K +W+ + + L +H + A+ +SP+ G
Sbjct: 290 GHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFG 348
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 487 MCQIL-TQYANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 660
+C ++ ++ N ++ + G+ + + VW GHS + + VSPDG +G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 661 GKDMKAMLWDL 693
D W++
Sbjct: 441 AGDETLRFWNV 451
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 502
++ H+KDV FS +N+ I S S DKTI++W + C I G S C+RF
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 503 P 505
P
Sbjct: 267 P 267
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
Y S S DKT+R+W+L+ G R + V+N + +G+ +K + ++N
Sbjct: 230 YIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFN 286
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 63 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 173
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
SG DK ++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 89 SGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
I+V+ WD V+ W ++ + + H + DG+ SGG D +A +
Sbjct: 39 ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKM 98
Query: 685 WD-LNDGKHLHTLDHNDIITALCFSP 759
W L+ G+ + H I A+ + P
Sbjct: 99 WPLLSGGQPVTVAMHEGPIAAMAWIP 124
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +2
Query: 275 SWDKTLRLWDL-----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
SWD +R W++ + + H + VL A+ D + SG DK K+W L+
Sbjct: 44 SWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLS 103
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF--SVDNRQIVSGSRDKTIKLWN 430
N +GSWDKTL+ WD T ++ HT+ + + SV + +V G+ D+ + ++N
Sbjct: 127 NLLATGSWDKTLKYWD-----TRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFN 181
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
+ S G D+ K+W L + + H G + + P +L A+G D WD
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQ 146
Query: 703 KHLHT 717
+HT
Sbjct: 147 NPVHT 151
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/90 (26%), Positives = 39/90 (43%)
Frame = +1
Query: 451 YHPR*WTQRLGVMCQILTQYANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 630
Y P+ W + G+ ++Y + + + D T+K W L + L GH ++T+ V
Sbjct: 579 YEPKDW-RYTGIHALAYSEYGH--VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVV 635
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL 720
+ SG D LW L+D L L
Sbjct: 636 V--NGVLYSGSWDGTVRLWSLSDNSLLTVL 663
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
+ +GS D T++ W L G H K V+S V N + SGS D T++LW+
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVRLWS 653
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 16/81 (19%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------G 400
SGSWD T+RLW L+ + T D L + + N I+S G
Sbjct: 642 SGSWDGTVRLWSLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTG 701
Query: 401 SRDKTIKLWNTLAECKYTIQD 463
DKTI + L K +QD
Sbjct: 702 GWDKTINVQGNLGRLKRNVQD 722
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 35.9 bits (79), Expect = 0.032
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKT 415
R SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 17 RELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 76
Query: 416 IKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
+W+ + I D H +V V + P
Sbjct: 77 CIIWDVNKGSVHQIL-DAHCHYVQGVAWDP 105
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 67 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKP 126
Query: 440 ECK 448
+ K
Sbjct: 127 QTK 129
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 759
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 105
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 460
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 287 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
T+ LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 461 DDGHSDWVSCVRFSPNMPT 517
GH V + ++ ++ T
Sbjct: 173 RGGHESRVGSLAWNNHILT 191
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
HT++V + +S +++ SG D + +W+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
SGS D+ + D+ + H +V + +S D+R++ SG D + +WN ++
Sbjct: 272 SGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ- 330
Query: 446 KYTIQDDGHSDWVSCVRFSPNMPTPL 523
+ ++ H+ V + +SP+ + L
Sbjct: 331 QPILKLTEHTAAVKAITWSPHQSSLL 356
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 595 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNDT 768
+GH + + S D ASGG D + ++W+ + + + L +H + A+ +SP+ +
Sbjct: 295 VGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 499 LTQYANPIIVSCGWDRTVKVWHLTNCKL-KINHLGHSGYLNTVTVSPDGSLCASGGKDMK 675
+ +++ +++ G V +W +N K+ K+ LG + + +V + +GS + G +
Sbjct: 179 VVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQ 238
Query: 676 AMLWDLNDGKHLHTL 720
+WD K + T+
Sbjct: 239 VQVWDGTQCKRVRTM 253
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
I + GWD ++V++ H N V+ SPD L AS +D LW L
Sbjct: 322 IAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWKL 379
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 586 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP 759
+ + GH+G + +++ G ASG D +W++ G+ L ++ I + ++P
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNP 474
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPN 508
++ HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 509 MPTPLLYPVVGTEL 550
P+L +G +L
Sbjct: 476 SRLPVLAVAMGRDL 489
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 427
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 890 NIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +2
Query: 290 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-Y 451
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K +
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRH 500
Query: 452 TIQDDGHSDWVSCVRFSPNM 511
T + + C + N+
Sbjct: 501 TFEGHEAPVYSVCPHYKENI 520
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 427
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 890 NIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +2
Query: 290 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-Y 451
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K +
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRH 500
Query: 452 TIQDDGHSDWVSCVRFSPNM 511
T + + C + N+
Sbjct: 501 TFEGHEAPVYSVCPHYKENI 520
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 496
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 161
Query: 497 FSP 505
+ P
Sbjct: 162 WDP 164
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 126 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKP 185
Query: 440 ECK 448
+ K
Sbjct: 186 QTK 188
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 759
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 496
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 161
Query: 497 FSP 505
+ P
Sbjct: 162 WDP 164
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 126 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKP 185
Query: 440 ECK 448
+ K
Sbjct: 186 QTK 188
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 631 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 759
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.1 bits (77), Expect = 0.055
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
H G +NTV+ + DG + SG D + +LWD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTIK 421
LSGS D+ + LWD F+ H ++ F D+R IV+ + DK ++
Sbjct: 71 LSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVR 125
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 35.1 bits (77), Expect = 0.055
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
+ S+D T +W + E H +V SV+++ + + SRDK++ +W L
Sbjct: 91 TASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEG 150
Query: 443 CKYTIQD--DGHSDWVSCVRFSPNM 511
+Y GH+ V V++ P M
Sbjct: 151 NEYDCAAVLTGHTQDVKMVQWHPTM 175
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 514 NPIIVSCGWDRTVKVWHLTN------CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 675
+PI+ SC D TV++W ++ CK + H+ + + SP G L A+ D
Sbjct: 39 SPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET-HTRTVRSCAWSPSGQLLATASFDGT 97
Query: 676 AMLW 687
+W
Sbjct: 98 TGIW 101
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +2
Query: 269 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
S S D T+R+W+ L+ T + E HT+ V S A+S + + + S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKN 103
Query: 434 LA---ECKYTIQDDGHSDWVSCVRFS 502
EC T+ +GH + V V ++
Sbjct: 104 YGSEFECISTL--EGHENEVKSVSWN 127
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Frame = +2
Query: 275 SWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW-----N 430
S DK++ +W++ G HT+DV V + + S S D TIK+W +
Sbjct: 137 SRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDD 196
Query: 431 TLAECKYTI--QDDGHSDWVSCVRFS 502
+C T+ ++GHS V + F+
Sbjct: 197 GEYQCVQTLGESNNGHSSTVWSISFN 222
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
H+ V S++F+ ++V+ S D T+K+W T
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLK-INHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 693
++ + +D T +W + + I+ L GH + +V+ + GS A+ +D +W++
Sbjct: 88 LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
Query: 694 NDG 702
+G
Sbjct: 148 LEG 150
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 439
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 440 ECKYTIQDDGHSDWVSCVRF 499
Q HS W+S ++
Sbjct: 347 TSAPVFQFSSHSSWISACKW 366
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 439
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 440 ECKYTIQDDGHSDWVSCVRF 499
Q HS W+S ++
Sbjct: 347 TSAPVFQFSSHSSWISACKW 366
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 439
+ LS S+D + LWDL + H VLS + +VSG D +++ + +A
Sbjct: 373 HLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 275 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
S ++LR + + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 356 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
+ F+ D + ++SGS D T+ WN + + + + VSC++++P
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAP 296
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 427
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +1
Query: 589 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALC 750
NHL H+G +N + S P+ LC + G+D +WD G LHT + H + ++C
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 436
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 900 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 427
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +1
Query: 589 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALC 750
NHL H+G +N + S P+ LC + G+D +WD G LHT + H + ++C
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 436
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 900 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 586 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPN 762
+ H +N ++SPDG L A G + + ++ D N GK L TL H D A + P+
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPD 330
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 403
N LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSS 308
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLND 699
++SCG+D T +++ + ++ + V PD ++ SGG LWD+
Sbjct: 220 LLSCGYDCTSRLFDVER-GVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRA 278
Query: 700 GKHLH 714
K +H
Sbjct: 279 NKFVH 283
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 34.3 bits (75), Expect = 0.097
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 329 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 702
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 51 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 200
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 51 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 200
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.097
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 60 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 164
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKA 678
+ S G D TVKVW +N K++ H+ ++ V +P+ S ASG +D K
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 679 MLWDL 693
++W +
Sbjct: 239 IIWTI 243
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +2
Query: 386 QIVSGSRDKTIKLW-----NTLAECKYTIQDDGHSDWVSCVRFSPNMPTPLLYPVVGTE 547
++ SG D T+K+W + +C + H+DWV V ++PN+ P G+E
Sbjct: 178 KLASGGCDSTVKVWKFSNGSWKMDCFPALNK--HTDWVRDVAWAPNLGLPKSTIASGSE 234
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 427
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 879 NIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 427
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
N G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 879 NIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
D +R D AGK H K V V +S Q+++GS DKTIK W+
Sbjct: 77 DTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRR 331
++GSWDKT++ WD T R
Sbjct: 113 ITGSWDKTIKCWDPRGASGTER 134
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 60 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 164
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 33.1 bits (72), Expect = 0.22
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Frame = +1
Query: 430 HPCGVQVYHPR*WTQRLGVMCQILTQYANPI--IVSCGWDRTVKVWHLTNCKLKINHL-- 597
HP GV W + + +P+ + S G D TVKVW L N K++
Sbjct: 149 HPVGVTSVS---WAPATAPGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPA 205
Query: 598 --GHSGYLNTVTVSPD----GSLCASGGKDMKAMLW 687
H+ ++ V +P+ S ASG +D K ++W
Sbjct: 206 LQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIW 241
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 386 QIVSGSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFSPNMPTP 520
++ SG D T+K+W +C +Q H+DWV V ++PN+ P
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLP 225
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN 762
+N +VSPDG L A G + ++ D + GK + +L H D A + PN
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPN 301
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCFSP 759
GH Y P+G + A+G +D LWD+ N + L N I L F+P
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTP 343
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 448
SGSWD ++R+WD ++ K + H+ V +A SGS + +W+ +E
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLASTSGS---DVYIWDVSSETP 327
Query: 449 YTIQDDGH 472
I D H
Sbjct: 328 LAIIPDAH 335
Score = 33.1 bits (72), Expect = 0.22
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 275 SWDKTLRLWDLAA---GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 442
S D L+DL KT R H + S+A +D I SGS D ++++W+ + +
Sbjct: 231 SLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLA--LDMTSIFSGSWDMSVRIWDRSSMK 288
Query: 443 CKYTIQDDGHSDWV 484
C T++ HSDWV
Sbjct: 289 CVKTLR---HSDWV 299
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDT 768
GH G + ++ + D + SG DM +WD + K + TL H+D + L +P++T
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDWVWGL--APHET 307
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 326 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 502
++ E H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFM 111
Query: 503 P 505
P
Sbjct: 112 P 112
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 690
H G +NTV+ + +G + SG D + +LWD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD 352
LSGS DKT+R+W + GK TKD
Sbjct: 911 LSGSADKTIRVWQIVKGKLECAEVIKTKD 939
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN-TLAEC 445
D T+++ D G + H + V F + +IV SGS D ++LWN T +EC
Sbjct: 127 DHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSEC 183
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 347 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPN 508
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPH 159
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT-VSPDGSLCASGGKDMKAMLWDL- 693
+I SC + +WH + + H+ + N + VSP+G A+ +W++
Sbjct: 211 VIASCSEGTDIVLWHGKTGR-NLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIV 269
Query: 694 --NDG------KHLHTLDHNDIITALCFSPNDTGYVLLS 786
DG + + H +T LCFSPN + S
Sbjct: 270 YQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITAS 308
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 329 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 466
+ + H V + FS ++ QI++ S+D +I++WN +Y + +D
Sbjct: 284 QLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYHLDED 327
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 418
Y LSGS D+ + LWD++A + +E H + V++ + N + S D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 419 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
+W+T + Q H V+ + F+P
Sbjct: 243 VIWDTRTN-QMQHQVKVHEREVNYLSFNP 270
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDL 693
++ + D TV ++ L ++ + H G + V P+ ++ AS G+D + M+WDL
Sbjct: 275 VLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334
Query: 694 N 696
N
Sbjct: 335 N 335
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN 762
+N ++SPDG L A G D +L D ++G+ + TL H D A + PN
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPN 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 336 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 395
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
K + D + +S + FSP+
Sbjct: 396 KKEQEIDFFGE-ISGISFSPD 415
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 475
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 362
Query: 476 DWVSCVRFS 502
V +RF+
Sbjct: 363 GAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN 762
+N ++SPDG L A G D +L D ++G+ + TL H D A + PN
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPN 324
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 330 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 389
Query: 446 KYTIQDDGHSDWVSCVRFSPN 508
K + D + +S + FSP+
Sbjct: 390 KKEQEIDFFGE-ISGISFSPD 409
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 475
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 356
Query: 476 DWVSCVRFS 502
V +RF+
Sbjct: 357 GAVRSIRFT 365
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 287 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
T+ LWD ++G T+ ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 144 TVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTL 203
Query: 461 DDGHSDWVSCVRFSPNMPT 517
GH V + ++ ++ T
Sbjct: 204 IGGHESRVGSLAWNNHILT 222
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 442
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 287 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 460
T+ LWD ++G T+ ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 147 TVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTL 206
Query: 461 DDGHSDWVSCVRFSPNMPT 517
GH V + + ++ T
Sbjct: 207 RGGHESRVGSLAWDNHILT 225
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 460
HT++V + +S + SG D + +W+ +LA K T Q
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQ 291
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKT 415
S ++D +++WD+A + ++H K V S+ S D + SGS D T
Sbjct: 601 SSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT 650
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 272 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
GS D + +DL K H+K V V F VD+ +VS S D T+KLW+
Sbjct: 679 GSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 705
HS +N + S DG+ SGG++ ++W L+ GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPN 762
+N ++SPDG L G + +++L D N GK L TL H D A + P+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPD 328
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT-LAEC 445
D T+++ D GK + H + V F + +IV SGS D ++LWN EC
Sbjct: 124 DHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT-LAEC 445
D T+++ D GK + H + V F + +IV SGS D ++LWN EC
Sbjct: 124 DHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 66 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRD 409
+S S DKTLR+WDL T + F + H V FS+ + ++S SR+
Sbjct: 469 VSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKDVISISRN 516
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 173
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 31.9 bits (69), Expect = 0.52
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 418
Y LSGS D+ + LWD++A T + +E H + VA+ + N I S D +
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 419 KLWNTLAECKYTIQDDGHSDWVSCVRFSP 505
+W+ L + Q H ++ + F+P
Sbjct: 244 VIWD-LRTNQMQHQVKVHEREINYLSFNP 271
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDL 693
++ + D TV ++ L ++ L H G + V P+ ++ AS G+D + M+WD+
Sbjct: 276 VLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
Query: 694 N 696
N
Sbjct: 336 N 336
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 278 NRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNC--KLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 690
+++SCG D ++W + K ++ L H +N+ SP G+ + +D + +WD
Sbjct: 327 LLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWD 386
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 696
++VS TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 261 VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +3
Query: 63 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 167
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 317 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
K + E H + + + +++ Q + SRDKT+K+W+
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWS 724
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSPDGSLCASGGKDMKAML 684
I+V+ WD V+ W +T I + H + DG+ +GG D +A +
Sbjct: 40 ILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKM 99
Query: 685 WDLNDGKHLHTLDHND 732
W L G T+ +D
Sbjct: 100 WPLLSGAQPSTVAMHD 115
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 421
+G DK ++W L +G H +A+ +V+GS DKT+K
Sbjct: 90 TGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 63 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 164
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +3
Query: 12 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 191
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 192 IPQKRLYGHSHFISDVV 242
L GHS + V+
Sbjct: 130 DTIAVLTGHSEDVKMVL 146
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +2
Query: 272 GSWDKTLRLWDLAA--GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 445
GS+D +W+ A ++ H +V SV+++ + + RDK++ +W E
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 446 KYTIQD----DGHSDWVSCVRFSPNM 511
GHS+ V V + P M
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTM 151
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLT------NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMK 675
++ SC +D T+K+W NC ++ L GHS + +++ + G + D+
Sbjct: 153 VLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLA 212
Query: 676 AMLW 687
+W
Sbjct: 213 VKIW 216
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNDTGYV 777
GH + +V+ + GSL A+ G+D +W++ + D D I L D V
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEED----DEFDTIAVLTGHSEDVKMV 145
Query: 778 L 780
L
Sbjct: 146 L 146
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 31.5 bits (68), Expect = 0.68
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 200
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 201 KRLYGHSHFISDVVLSSDVITHFPVLGTRLCVCGISLQARLPDD 332
+Y + V + V+ + + G L V S +LP D
Sbjct: 3370 TVVYINDLTGEIVTAAGSVLAVWSINGDCLSVVNTS---QLPTD 3410
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 341 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 266 LSGSWDKTLRLWD 304
++GSWDKT++ WD
Sbjct: 114 ITGSWDKTVKCWD 126
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 254 RNYALSGSWDKTLRLWDLAAG 316
+ Y +SGS D T+RLWD+ +G
Sbjct: 219 QGYLMSGSGDSTVRLWDITSG 239
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 341 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 478
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 341 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 478
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 493 QILTQYANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGK 666
Q++ + + S VK+ L C K GH+ ++V P +GG
Sbjct: 110 QVVCNGRSSFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGL 169
Query: 667 DMKAMLWDLNDGKHLHTLD 723
D K +LWD + G+ +D
Sbjct: 170 DSKLVLWDFSKGRSQKIID 188
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 266 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 373
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 580 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP 759
L+ +HL YL T +P+G A+ G D + +LWD++ + + + I + + P
Sbjct: 233 LRGDHLEAICYL---TWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKP 289
Query: 760 NDTGYVLLSDLPSRSG 807
N ++ D R G
Sbjct: 290 NGNALSVI-DAKGRYG 304
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 520 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 699
++ S D VK++ + + + N + + + + GSL A+ G D L + D
Sbjct: 76 LLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFD 135
Query: 700 GKHLHTL-DHNDIITALCFSPN 762
G + L H +T L F PN
Sbjct: 136 GSIVRVLKGHKGPVTGLDFHPN 157
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 284 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 708
H G + + + DG S G D + LWD+ G++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 875 NVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 568 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDII-T 741
T K I L +G + ++ S DG S G D + +WDL K L+ +D T
Sbjct: 362 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 421
Query: 742 ALCFSPN 762
+LC S N
Sbjct: 422 SLCSSLN 428
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
SGS+D TL +W+ H ++LS+ ++ +++S RD+T++L+
Sbjct: 280 SGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERVLSVGRDRTMQLY 331
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 711
H+ + VS DG A+GG D LWD+ +H+
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHV 241
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 290 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 332 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
F H V S+ F ++ SGS D T+ +WN
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 625 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDI--ITALCF 753
TV+ G ASGG D L+DL L + LDHN ITAL F
Sbjct: 46 TVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSF 91
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 269 SGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVSGSRDKTIK 421
+ S+DK ++LWDL + + TK + V FS D+R +++ + D ++
Sbjct: 601 TSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 314 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 433
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 51 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 215
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 421
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 422 LWNT 433
+W+T
Sbjct: 237 VWDT 240
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 714
H G + + P SL +G KD + LWD K +H
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIH 2411
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 418
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 281 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 454
D ++ + L++ K + E H + + +AFS +VS D + LW+T + K T
Sbjct: 490 DGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLT 547
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 598 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCFS 756
GH Y + P+G + A+G +D LWD+ N + L L N I AL F+
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 296 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
L D +GK E H S A+ + + + +G++D T +LW+
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWD 347
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 685 WDLNDGKHLHTLDHNDIITALCFSPNDTGYVLLSDLPSRS 804
WDLN K L TL+H +I+T P ++ L SRS
Sbjct: 654 WDLNTVKELETLEHLEILTT-TIDPRAKQFLSSHRLMSRS 692
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 284 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 12 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 167
L+ P S S + L H G V + N K P+ + S + D T+ +W L
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 138 RDKTLIVWKLTRDENNYGIPQKRLYGHSH-FISDVVLSSDVIT 263
R+ ++++KL R+E +Y + + LYG H ++ +VL +T
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCHRCLTSLVLCLSEVT 313
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PDGSLCASGGKDMKAMLWDLN 696
+V+ G D +K+W + + ++ + GH N V +S +G+L G ++ + ++D
Sbjct: 127 VVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRR 186
Query: 697 DGK 705
GK
Sbjct: 187 WGK 189
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +2
Query: 260 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 403
Y SG + +++WDL ++ + HT + V ++ + + S S
Sbjct: 107 YICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 601 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 705
HS + + S DG+L SG K ++W+L GK
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 613 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDIITALCFSPNDTGYVLLS 786
++ VS DG L A G + ++ + + + + H ++TAL FSP+ G V +S
Sbjct: 288 ISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLVSVS 347
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 685 WDLNDGKHLHTLDHNDIIT 741
WDLN K L TL+H +I+T
Sbjct: 652 WDLNTVKELETLEHLEILT 670
>At5g59110.1 68418.m07407 subtilisin-like serine protease-related
similar to prepro-cucumisin GI:807698 from [Cucumis
melo], subtilisin-like protease C1 [Glycine max]
GI:13325079
Length = 172
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 482 VSCVRFSPNMPTPLLYPVVGTELSRSGISLTVS 580
++C + + +P L YP + +L RS SLTV+
Sbjct: 53 ITCTKENKTLPRNLNYPSMSAQLRRSESSLTVT 85
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 692 RSHNIAFMSLPPDAHKEPSGDTVTVF 615
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/57 (21%), Positives = 25/57 (43%)
Frame = +2
Query: 257 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 886 NIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 523 IVSCGWDRTVKVWHLTNCKL 582
+V+CG D+ +KVW L+ KL
Sbjct: 470 VVTCGDDKLIKVWDLSGKKL 489
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 692 RSHNIAFMSLPPDAHKEPSGDTVTVF 615
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 344 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 430
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 329 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 329 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 427
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 12 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 179
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 12 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 179
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 36 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 161
S T+ RG GH V +A +P S D LI+W
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,655,145
Number of Sequences: 28952
Number of extensions: 446974
Number of successful extensions: 2764
Number of sequences better than 10.0: 225
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2631
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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