Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30406
(676 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 133 4e-30
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 124 3e-27
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 116 5e-25
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 103 4e-21
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 93 6e-18
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 91 3e-17
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 85 1e-15
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 83 6e-15
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 83 8e-15
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 78 2e-13
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 77 4e-13
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 66 7e-10
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 63 7e-09
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 60 5e-08
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 57 3e-07
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 52 1e-05
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 51 3e-05
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 48 2e-04
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 48 3e-04
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 46 0.001
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 43 0.006
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 42 0.010
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 40 0.055
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 38 0.22
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 38 0.29
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 37 0.51
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 37 0.51
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 36 0.90
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 36 1.2
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 36 1.2
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 36 1.2
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 35 1.6
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 35 2.1
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 34 2.7
UniRef50_Q2KNW3 Cluster: Plasmepsin 10; n=10; Plasmodium falcipa... 33 6.3
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 33 8.4
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 133 bits (321), Expect = 4e-30
Identities = 63/78 (80%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
Frame = +1
Query: 286 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 462
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 463 TTRKTPCGEGSKTWDLFR 516
TTRKTPCGEGSKTWD F+
Sbjct: 66 TTRKTPCGEGSKTWDRFQ 83
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 626
FQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 82 FQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 124 bits (298), Expect = 3e-27
Identities = 60/78 (76%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +1
Query: 286 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 462
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 463 TTRKTPCGEGSKTWDLFR 516
TTRKTPCGEGSKTWD F+
Sbjct: 64 TTRKTPCGEGSKTWDRFQ 81
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 629
FQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 80 FQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 116 bits (279), Expect = 5e-25
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = +1
Query: 295 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 474
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 475 TPCGEGSKTWDLF 513
TP GEGSKTW+ +
Sbjct: 68 TPNGEGSKTWETY 80
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/39 (87%), Positives = 39/39 (100%)
Frame = +3
Query: 507 SFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 623
+++MRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIA
Sbjct: 79 TYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 103 bits (247), Expect = 4e-21
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +1
Query: 268 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 447
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 448 KILRITTRKTPCGEGSKTWDLFR 516
K+LR+TTRKTPCGEGSKTWD F+
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQ 82
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 623
FQ+RIHKRVIDL S E Q+ I +EPGV +V ++
Sbjct: 81 FQLRIHKRVIDLLSTDEATLQLKHIYLEPGVNCDVIVS 118
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/77 (55%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +1
Query: 286 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 462
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 463 TTRKTPCGEGSKTWDLF 513
T RK+PCGEGSKTWD F
Sbjct: 64 TVRKSPCGEGSKTWDRF 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
F+MRI+KR+IDL VK IT+ I+PGVE+E+T+
Sbjct: 80 FEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTM 116
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 286 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 465
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 466 TRKTPCGEGSKTWDLFR 516
TRKTPCGEGSKTWD ++
Sbjct: 65 TRKTPCGEGSKTWDHYQ 81
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 626
+QMRI+KRV+ + + E VK+ITS+ +EPGVE+EV + D
Sbjct: 80 YQMRIYKRVLSMKTTPETVKEITSLKVEPGVELEVAMFD 118
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 85.0 bits (201), Expect = 1e-15
Identities = 35/73 (47%), Positives = 53/73 (72%)
Frame = +1
Query: 295 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 474
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 475 TPCGEGSKTWDLF 513
TPCG G+ TWD F
Sbjct: 65 TPCGNGTNTWDTF 77
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/40 (55%), Positives = 34/40 (85%)
Frame = +3
Query: 507 SFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 626
+F+++I+KR+IDLH+P+E VK+ITS +E GV+V +TI D
Sbjct: 76 TFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILD 115
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +1
Query: 388 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDLFR 516
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWD F+
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 445
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 626
FQMRIHKRVIDL+SPSEIVKQITSI++EPGVEVEVTIA+
Sbjct: 444 FQMRIHKRVIDLYSPSEIVKQITSISLEPGVEVEVTIAN 482
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 82.6 bits (195), Expect = 8e-15
Identities = 41/57 (71%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +1
Query: 286 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 453
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV 60
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +1
Query: 262 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 441
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 442 PTKILRITTRKTPCGEGSKTWDLF 513
P + LRITTR+ PCG G++T+D F
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHF 84
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
F++RI+KRVID +E VKQ+T I +EP V VEV++
Sbjct: 84 FELRIYKRVIDFQGTAEAVKQVTQIALEPDVHVEVSV 120
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 77.0 bits (181), Expect = 4e-13
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +1
Query: 331 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDL 510
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 511 F 513
F
Sbjct: 76 F 76
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
F+M+IHKR+ID HS IT IN++ G+E++ I
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNGIEIDAQI 112
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 66.1 bits (154), Expect = 7e-10
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Frame = +1
Query: 295 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 456
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 457 RITTRKTPCGEGSKTWDLF 513
++T RK+PCGEGSKTWD F
Sbjct: 66 KMTVRKSPCGEGSKTWDRF 84
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
F+MRIHKRVID K IT+ I PG+ VE+ +
Sbjct: 84 FEMRIHKRVIDFQCTLPTFKDITNFKIGPGINVELNV 120
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3
Query: 513 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 629
+M+IH ++IDL SPSEIVKQITS++IEP VE EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +1
Query: 334 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 507
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYE 63
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 507
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Score = 34.3 bits (75), Expect = 2.7
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
++MR+HKR+ID+ + ++QI I + V +E+ +
Sbjct: 68 WEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 319 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 495
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 496 KTWD 507
T+D
Sbjct: 78 HTYD 81
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
++MRIHKRV+D+ + ++Q+ + I V+VE+ +
Sbjct: 83 WEMRIHKRVVDMDADERALRQLMRLRIPEDVKVEIEL 119
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 319 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 498
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 499 TWD 507
+D
Sbjct: 63 VFD 65
Score = 33.5 bits (73), Expect = 4.8
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
++MRIHKR+ID+ ++++ I I + V +E+ I
Sbjct: 67 WEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYIEIQI 103
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 507
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Score = 33.1 bits (72), Expect = 6.3
Identities = 9/37 (24%), Positives = 25/37 (67%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 620
++M++HKR+ID+ + +++Q+ + + V +E+ +
Sbjct: 65 WEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 337 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDLF 513
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ TW F
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRF 83
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 331 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDL 510
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 511 FRCESTR---E*STYTLPLKL*NRSPQLT 588
++ R + +T +KL R+P +T
Sbjct: 64 YQMRIHRRIIDIATDDRTIKLLMRTPLIT 92
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 322 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP 53
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +1
Query: 244 PEFKSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRV 423
PE A+ V S I +++P +IRI L S V +E C +++ A+ +
Sbjct: 66 PEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKT 125
Query: 424 KGPVRMPTKILRITTRKTP 480
GPV +PTK K+P
Sbjct: 126 MGPVPLPTKKRIYCVLKSP 144
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 39.9 bits (89), Expect = 0.055
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 325 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP 54
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 304 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 450
QA +IRI L S ++ C ++ AK + RV GPV +PTK
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTK 79
Score = 32.7 bits (71), Expect = 8.4
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 620
F+ R H R+ID+H P ++ + + ++ + GV+VE+ +
Sbjct: 99 FETRTHHRLIDVHQPTAQTIDALMALELPSGVDVEIKL 136
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSP 53
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 36.7 bits (81), Expect = 0.51
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP 55
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 36.7 bits (81), Expect = 0.51
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP 55
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 35.9 bits (79), Expect = 0.90
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 507
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 508 LFR 516
++
Sbjct: 80 RYK 82
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP 64
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +3
Query: 489 RFKDLGS-FQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 620
+FKD F+MR HKR+ID+ +P+ + V + +++ GV++E+ +
Sbjct: 57 KFKDSREQFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL 102
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 480
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSP 55
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 495 KDLGSFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVEVEVTIA 623
K F++R HKR++D+ P++ V Q+ +++ GV+VE+ ++
Sbjct: 60 KSREQFEVRTHKRMLDILEPTQQTVDQLMKLDLSAGVDVEIKLS 103
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/38 (34%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 510 FQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 620
F+ R H+R+ID++SPS + + + +++ GV++EV +
Sbjct: 69 FETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDIEVKL 106
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 322 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTP 480
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSP 56
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/46 (32%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +3
Query: 489 RFKDLGS-FQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 620
++KD F+MR HKR+ID+ +P+ + V + +++ GV++E+ +
Sbjct: 57 KYKDSREQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q2KNW3 Cluster: Plasmepsin 10; n=10; Plasmodium
falciparum|Rep: Plasmepsin 10 - Plasmodium falciparum
Length = 579
Score = 33.1 bits (72), Expect = 6.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 445 TKILRITTRKTPCGEGSKTWDLFRCESTRE*STYTLPLKL*NRSP 579
T+I +I T+ PC E +D C + S++ +PLKL ++P
Sbjct: 27 TRIYKIGTKALPCSECHDVFDCTGCLFEEKESSHVIPLKLNKKNP 71
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 32.7 bits (71), Expect = 8.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 328 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 450
++RI L+S + L C +++ K+ VKGPV +PT+
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTR 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,101,170
Number of Sequences: 1657284
Number of extensions: 11765508
Number of successful extensions: 26525
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 25937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26515
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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