Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30401
(745 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 33 0.002
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 27 0.12
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 27 0.12
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 24 1.5
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 24 1.5
DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 23 3.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 3.4
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 22 4.5
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 22 6.0
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 22 6.0
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 7.9
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 33.1 bits (72), Expect = 0.002
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEARTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTDIR 182
ELL V A+ FR ++ + TDH+ L F +R S R R+ + Q+ +I
Sbjct: 648 ELLGVIFALHKFRIYIQVTKIIIRTDHQAL--KFLSRCRLLSERLTRWTLILGQYDYEIE 705
Query: 183 YIPGK 197
+ GK
Sbjct: 706 LVKGK 710
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 27.5 bits (58), Expect = 0.12
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 629 VTYTWTLSDLYLFLIVTGFVLRLLTVT 709
+T+ WT +DL++ LI T R +T
Sbjct: 221 ITFIWTYNDLFVMLISTALAYRFGQIT 247
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 27.5 bits (58), Expect = 0.12
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 629 VTYTWTLSDLYLFLIVTGFVLRLLTVT 709
+T+ WT +DL++ LI T R +T
Sbjct: 221 ITFIWTYNDLFVMLISTALAYRFGQIT 247
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 635 YTWTLSDLYLFLIVTGFVLRLLT 703
YT T LYLFLI+T + LL+
Sbjct: 286 YTVTFLCLYLFLIITLTIYGLLS 308
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.8 bits (49), Expect = 1.5
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 249 TLSTSPSPKLR---KPIPNSITSSEKAQVSHSKVLEYPAQMSTCTATCQHQFHDHTSLSN 419
+L++SP P + +P P+ + V++ L YP+ + + +Q ++ S+ N
Sbjct: 325 SLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTYPSYYNQDVSCTHYQNPEYISVVN 384
Query: 420 SEDRY 434
E Y
Sbjct: 385 PESPY 389
>DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory
protein 13 protein.
Length = 124
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 177 CRLRTGKCSPS 145
C L TGKC+PS
Sbjct: 44 CLLGTGKCTPS 54
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 261 SPSPKLRKPIPNSITSSEKAQVSHSKVLEYPAQMSTCTATCQHQFHDHTSLSNS 422
SPSP+ R P +++ + V S P+ ++ + F D S NS
Sbjct: 696 SPSPQQRSPSVTDLSTKDGTTVPESNNGSSPSVLNAIEKLIEKSF-DSRSRQNS 748
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 195 KDNVVADTLSRIEEVGAAT 251
K NVVAD LSR G A+
Sbjct: 22 KGNVVADILSRYPSDGEAS 40
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 393 FHDHTSLSNS 422
FHDH S+SN+
Sbjct: 57 FHDHVSVSNT 66
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 614 LLLVFVTYTWTLSDLYL 664
+++V +TY L+DL+L
Sbjct: 247 IIIVVITYVLNLTDLFL 263
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 123 CSPRQYRYLDYISQFSTDIR 182
C +++L+YI+QF + R
Sbjct: 399 CHMVSHKWLNYINQFEANFR 418
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,317
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -