Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30401
(745 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 54 2e-08
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 54 2e-08
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 54 2e-08
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 54 2e-08
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 54 2e-08
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 54 2e-08
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 54 2e-08
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 54 2e-08
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 54 2e-08
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 54 2e-08
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 54 2e-08
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 28 1.6
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 27 3.7
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 27 3.7
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 27 3.7
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 26 4.9
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.9
SPBC215.14c |vps20||vacuolar sorting protein Vps20|Schizosacchar... 26 6.5
SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr ... 25 8.6
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 25 8.6
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 25 8.6
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 25 8.6
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 ELLAVYEAIRYFRYMVEA--RTFAVLTDHKPLTYAFTTRRDSCSPRQYRYLDYISQFSTD 176
E+LA+ ++++++R+ +E+ F +LTDH+ L T + + R R+ ++ F+ +
Sbjct: 755 EMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFE 814
Query: 177 IRYIPGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQV 326
I Y PG N +AD LSRI + S + SIT K QV
Sbjct: 815 INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQV 864
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 RPLRMEGIRKDCSRWAKECQECQRCKVHKHTA-APLSQFKLPTARFRHVHMDIIGPLPIS 669
R +GIRK + + C CQ K H PL + + MD I LP S
Sbjct: 939 RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998
Query: 670 DSYRFCLTLVDRHSRWPEVIPCATS 744
Y +VDR S+ ++PC S
Sbjct: 999 SGYNALFVVVDRFSKMAILVPCTKS 1023
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 434 FHNLHNLSHPGRKATIKLITDRFVWK 511
+H L HPG + +I RF WK
Sbjct: 919 YHEEGKLIHPGIELLTNIILRRFTWK 944
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 27.9 bits (59), Expect = 1.6
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +3
Query: 216 TLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQVSHSKVLEYPAQMSTCTATCQHQF 395
T + A+ STS S L +S TSS K+ S S + S+ + +
Sbjct: 499 TATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSG 558
Query: 396 HDHTSLSNSEDRY---SIICTTSVIRVERLQSNSSPTAS 503
HT S S+ + S T+SV S+SS ++S
Sbjct: 559 SSHTITSTSQSVHTSGSSTSTSSVAVTSTAYSSSSSSSS 597
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 189 PGKDNVVADTLSRIEEVGAATLSTSPSPKLRKPIPNSITSSEKAQVS 329
P K + + T + LST+ PK++KP+P + ++S
Sbjct: 340 PEKGGISSTTSVSPAAQASPVLSTTTQPKVQKPVPKAFQPKVPMEIS 386
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 320 SSLTLKSVRVPGTDVDVYCDMSTSVPRPYITEQFRRQVFHNLH 448
+SL + V DVD Y D S SV P ++ R++ ++L+
Sbjct: 246 ASLPIDEVESMDEDVDGYSDHSVSVAAPIPKKESRKESSNSLY 288
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 26.6 bits (56), Expect = 3.7
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 294 NSITSSEKAQVSHSKVLEYPAQMSTCTATCQHQFHD--HTSLSNSEDRYSIICTTSVIRV 467
NSI S +S + +YP + T Q H+ S+SNS+ ++ +T++ V
Sbjct: 386 NSIEGSNMNSLS-PLLFDYPNSLYPVNNTSSEQHHNSYRGSVSNSQPSGNLSESTNLQPV 444
Query: 468 ERLQSNSSPTASYGRH 515
+ + S+ SYG +
Sbjct: 445 QPVDYMSNSNPSYGSY 460
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 255 STSPSPKLRKPIPNSITSSEKAQVSHSKVLEYPAQMSTCTATCQHQF-HDHTSLSN 419
++S K +P+PN S+ A SHS P + T F H+ SN
Sbjct: 122 TSSQETKRDRPLPNIRNSAPSATRSHSTPCVAPGYLRTSNEAADVVFPHEEAHFSN 177
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 404 YITEQFRRQVFHNLHNLSHPGRKATIKLITDRF 502
Y+ E+++ +FH L+ GR +L D+F
Sbjct: 154 YLLEKYQINLFHREERLTDQGRPVAFELPPDKF 186
>SPBC215.14c |vps20||vacuolar sorting protein
Vps20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 272 QAQKTDTELNNLIREGSSLTLKSVRVPGTDVDVYCDMSTSVP 397
Q + EL++LIRE +K + PG D+ SVP
Sbjct: 147 QEDEIQEELDSLIREQEDEKVKDLEKPGFTPSTGVDVLPSVP 188
>SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 332 LKSVRVPGTDVDVYCDMSTSVPRPYITEQF 421
LK+ + TDV + D+ + VP+ ++ ++F
Sbjct: 204 LKNEKTTDTDVKIVNDLCSFVPKDWVRDEF 233
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 234 EVGAATLSTSPSPKLRKPIPNSITSSEKAQVS 329
E GA T+ +P +L +P+P+ +++ QVS
Sbjct: 252 ERGAGTVFYNPVSRLTQPLPSLASTASPQQVS 283
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 580 HTAAPLSQFKLPTARFRHVHMDIIGPLPISDSYRFCLTLVD 702
H+ APLS + R R H I P+ + +TLV+
Sbjct: 178 HSPAPLSTMQTALMRLRTYHPSPIILKPVEQAVNHAITLVN 218
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 289 IGFLSLGEGLVLSVAAPTSSMRERVSATTL-SLPGM 185
IGF S+G+ +LS T S TTL ++PG+
Sbjct: 68 IGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGV 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,015,015
Number of Sequences: 5004
Number of extensions: 61372
Number of successful extensions: 247
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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