Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30401
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   4.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.2  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 275 AQKTDTELNNLIREGSS 325
           AQKT+++ NN++ EG S
Sbjct: 278 AQKTESKTNNIVVEGVS 294


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 249 TLSTSPSP-KLRKPIPNSITSSEKAQ 323
           T+   P P +L KP+ + ITSSE  Q
Sbjct: 486 TIQGLPPPYRLNKPLMSLITSSEVRQ 511


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -2

Query: 438 WNTCLRNCSVMYGRGTDVDMSQY-TSTSVPGTLTLLSVRLEPS 313
           + T L + +++  R   ++ + Y T T V  T+TL+++ LEPS
Sbjct: 228 FTTDLLSYNILLRRHYSMNSTTYVTLTIVLMTMTLMTLWLEPS 270


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 504 YGRHTQGLQQMGEGMSGMSTLQGA*THSSTFVP 602
           YGRH  G  QMG      +T+    T  S  +P
Sbjct: 210 YGRHLPGHAQMGRPSYTTATMATTSTPGSGSLP 242


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 273 KLRKPIPNSITSSEKAQVSHSKVLEYPAQMSTCTAT 380
           KL KP+ +S T++     S    +      STC+ T
Sbjct: 317 KLEKPVLSSSTTTTSPMTSTKSTIVRNHLNSTCSVT 352


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 472 GYNQTHHRPLRMEGIRKDCSRWAKE 546
           G    HH      G RKD  RW ++
Sbjct: 151 GGTTLHHGMAYHRGHRKDYERWVQQ 175


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 456 LRLCRLWNTC 427
           + LC+LW TC
Sbjct: 106 IHLCKLWLTC 115


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 456 LRLCRLWNTC 427
           + LC+LW TC
Sbjct: 106 IHLCKLWLTC 115


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 456 LRLCRLWNTC 427
           + LC+LW TC
Sbjct: 106 IHLCKLWLTC 115


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 338 SVRVPGTDVDVYCDMSTSVPRPYI 409
           S RV G +V++ CD++ + P P +
Sbjct: 321 SARV-GDNVEIKCDVTGTPPPPLV 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,277
Number of Sequences: 438
Number of extensions: 4052
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)