Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30398
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.62 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.6  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 232 VHREGLPWHLPSARCLHPKGESVEEAPFRDLEVDG 128
           +HRE + W + + R ++ +GES   + +R L  +G
Sbjct: 289 MHREDVRWVMIALRQMYDRGESKGSSCYRLLSRNG 323


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 282 VSDVACNDFTHFLSDCSDLSVLGVHVLRWL 371
           V+ V C  F   LS  SD +  G   L WL
Sbjct: 397 VTKVTCELFQATLSSSSDTNRFGTSGLAWL 426


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 480 GWLKNGRLSS 451
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 370 SRSPYW*NQCRRHVERIHRLSSHQC 444
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = +1

Query: 97  PLASTAFAVKFHQLRDLETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNHLFTTSLS 276
           P  S +   K     ++E  P   +  +D++  +       + DV+  G R   F T+L 
Sbjct: 205 PEKSASIPKKKEVKEEIEDEPDHKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGAFRTTLG 264

Query: 277 SELVTSRVM 303
           SEL   +V+
Sbjct: 265 SELSKVKVI 273


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 232 VHREGLPWHLPSARCLH 182
           V  +  P+H P   C+H
Sbjct: 344 VRHKNTPYHTPEPDCIH 360


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 186 CIRKVKVLKRPRFEISKLME 127
           C+R     KRP+FE S   E
Sbjct: 192 CLRTCSSAKRPKFENSSCDE 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,869
Number of Sequences: 336
Number of extensions: 3654
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)