Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30398
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   177   3e-46
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.77 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.2  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  177 bits (431), Expect = 3e-46
 Identities = 113/238 (47%), Positives = 142/238 (59%), Gaps = 11/238 (4%)
 Frame = -3

Query: 717 PSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQ 538
           P+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V 
Sbjct: 36  PNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVN 95

Query: 537 GRNVLCNFHGW--TSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYVSSALVS-PIRTP*A 367
           GR+VL NFHG   T+  + S   + N   +     +  +  D F +    +   I+   +
Sbjct: 96  GRDVLTNFHGMALTTDKLRS---MVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMS 152

Query: 366 NARRVRPAHSGQSNQKENV*NHYTRRH*L*T--QGGGEQVIPDSIAKYIEKACHGIYPLR 193
             +     HS   N +  +     +R    T  +G  E+++PDSIAK IEKAC  +YPL 
Sbjct: 153 QRKTCYAQHSQIKNIRAKM-TAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLH 211

Query: 192 DVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSE------RPEGYEPPVQESV 37
           DV IRKVKVLK+PRF++S LMELH             +       RPEGYEPPVQ SV
Sbjct: 212 DVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVVRPEGYEPPVQASV 269



 Score = 93.9 bits (223), Expect = 4e-21
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
           M LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTC
Sbjct: 106 MALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTC 157



 Score = 41.1 bits (92), Expect = 3e-05
 Identities = 17/33 (51%), Positives = 26/33 (78%)
 Frame = -1

Query: 353 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 255
           YAQH+Q++ IR KM  II R++T+++L+ VV K
Sbjct: 158 YAQHSQIKNIRAKMTAIIKREITSTDLKGVVEK 190


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 205 LPSARCLHPKGESVEEAPFRDLEVDGT 125
           +P   C H  G ++E+A    LE DGT
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGT 583


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 312 HFLSDCSDLSVLGVHVLRWLKESL 383
           HFL+D     ++  H+  W+K+SL
Sbjct: 17  HFLNDLKYPVLIRQHLGNWIKDSL 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,972
Number of Sequences: 2352
Number of extensions: 15510
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)