Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30398
(719 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 153 3e-37
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 116 2e-26
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 116 2e-26
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 116 2e-26
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 91 2e-18
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 91 2e-18
AY071213-1|AAL48835.1| 334|Drosophila melanogaster RE25803p pro... 29 6.4
AE014296-3297|AAF49054.2| 334|Drosophila melanogaster CG17145-P... 29 6.4
AY051709-1|AAK93133.1| 416|Drosophila melanogaster LD24756p pro... 29 8.4
AE014298-1673|AAF48082.2| 416|Drosophila melanogaster CG1837-PA... 29 8.4
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 153 bits (370), Expect = 3e-37
Identities = 103/238 (43%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Frame = -3
Query: 717 PSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYV 541
P+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE V
Sbjct: 36 PNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDV 95
Query: 540 QGRNVLCNFHGWTSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYVSSALVSPIRTP*ANA 361
Q RNVLCNFHG +K + + ++ + +D + + + +
Sbjct: 96 QDRNVLCNFHGMDLTTDKYRSMVKKWQTLIE-AIVEAKTVDGYLLRVFCIGFTAKDQQSQ 154
Query: 360 RRVRPAHSGQ-----SNQKENV*NHYTRRH*L*TQGGGEQVIPDSIAKYIEKACHGIYPL 196
R+ AH Q S + ++ + L + ++ DSIAK IEK+C IYPL
Sbjct: 155 RKTCYAHESQVRKIRSGRMTDIITNEVSGADL--KQLVNKLALDSIAKDIEKSCQRIYPL 212
Query: 195 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSE-RPEG----YEPPVQESV 37
DV IRKVKVLK+PRF++SKL+ELH SE P+ +PPVQESV
Sbjct: 213 HDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAPKSTALKVKPPVQESV 270
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -2
Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTC
Sbjct: 107 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTC 158
Score = 35.5 bits (78), Expect = 0.073
Identities = 16/34 (47%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = -1
Query: 353 YAQHTQVRAIRK-KMCEIITRDVTNSELREVVNK 255
YA +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 159 YAHESQVRKIRSGRMTDIITNEVSGADLKQLVNK 192
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 116 bits (280), Expect = 2e-26
Identities = 56/70 (80%), Positives = 60/70 (85%)
Frame = -3
Query: 717 PSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQ 538
P+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ
Sbjct: 36 PNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQ 95
Query: 537 GRNVLCNFHG 508
RNVLCNFHG
Sbjct: 96 DRNVLCNFHG 105
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -2
Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTC
Sbjct: 106 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTC 157
Score = 38.3 bits (85), Expect = 0.010
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = -1
Query: 353 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNK*FLTPLPSTSRRPAMASTLCAMF 186
YAQ +QVR IR +M +IIT +V+ ++L++++ T L S++ A MF
Sbjct: 158 YAQQSQVRKIRARMTDIITNEVSGADLKQLLTSWPWTRLRKISKKAVSAYIHYMMF 213
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 116 bits (280), Expect = 2e-26
Identities = 56/70 (80%), Positives = 60/70 (85%)
Frame = -3
Query: 717 PSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQ 538
P+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ
Sbjct: 36 PNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQ 95
Query: 537 GRNVLCNFHG 508
RNVLCNFHG
Sbjct: 96 DRNVLCNFHG 105
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -2
Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTC
Sbjct: 106 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTC 157
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/75 (61%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Frame = -3
Query: 246 DSIAKYIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSE--- 76
DSIAK IEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH SE
Sbjct: 194 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 253
Query: 75 --RPEGYEPPVQESV 37
RPEGYEPPVQE+V
Sbjct: 254 IDRPEGYEPPVQEAV 268
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = -1
Query: 353 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 255
YAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 158 YAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 116 bits (280), Expect = 2e-26
Identities = 56/70 (80%), Positives = 60/70 (85%)
Frame = -3
Query: 717 PSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQ 538
P+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ
Sbjct: 36 PNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQ 95
Query: 537 GRNVLCNFHG 508
RNVLCNFHG
Sbjct: 96 DRNVLCNFHG 105
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -2
Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTC
Sbjct: 106 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTC 157
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/75 (61%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Frame = -3
Query: 246 DSIAKYIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSE--- 76
DSIAK IEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH SE
Sbjct: 194 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 253
Query: 75 --RPEGYEPPVQESV 37
RPEGYEPPVQE+V
Sbjct: 254 IDRPEGYEPPVQEAV 268
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = -1
Query: 353 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 255
YAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 158 YAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -2
Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTC
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTC 52
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/75 (61%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Frame = -3
Query: 246 DSIAKYIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSE--- 76
DSIAK IEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH SE
Sbjct: 89 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 148
Query: 75 --RPEGYEPPVQESV 37
RPEGYEPPVQE+V
Sbjct: 149 IDRPEGYEPPVQEAV 163
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = -1
Query: 353 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 255
YAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 53 YAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 85
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -2
Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 353
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTC
Sbjct: 56 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTC 107
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/75 (61%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Frame = -3
Query: 246 DSIAKYIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSE--- 76
DSIAK IEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH SE
Sbjct: 144 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 203
Query: 75 --RPEGYEPPVQESV 37
RPEGYEPPVQE+V
Sbjct: 204 IDRPEGYEPPVQEAV 218
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3
Query: 633 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 508
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHG
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHG 55
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = -1
Query: 353 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 255
YAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 108 YAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 140
>AY071213-1|AAL48835.1| 334|Drosophila melanogaster RE25803p
protein.
Length = 334
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 379 DSLSQRKTCTPSTLRSEQSERKCVKSLHATS 287
DS+S TCT ST ++ KCVKSL ++
Sbjct: 53 DSVSYYSTCTGSTPFFDKDTGKCVKSLSTST 83
>AE014296-3297|AAF49054.2| 334|Drosophila melanogaster CG17145-PA
protein.
Length = 334
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 379 DSLSQRKTCTPSTLRSEQSERKCVKSLHATS 287
DS+S TCT ST ++ KCVKSL ++
Sbjct: 53 DSVSYYSTCTGSTPFFDKDTGKCVKSLSTST 83
>AY051709-1|AAK93133.1| 416|Drosophila melanogaster LD24756p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 231 TWQWSQESLVHHLPEFRVSDVACNDFTHFLSDCSDLSVLGVHVLRWLKESLLVKPMQKTR 410
TW+ + L+ P +S + C T F S C D V G L W+++ ++ R
Sbjct: 203 TWEDLAKELIKE-PTVTISKIDC---TQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGAR 258
>AE014298-1673|AAF48082.2| 416|Drosophila melanogaster CG1837-PA
protein.
Length = 416
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 231 TWQWSQESLVHHLPEFRVSDVACNDFTHFLSDCSDLSVLGVHVLRWLKESLLVKPMQKTR 410
TW+ + L+ P +S + C T F S C D V G L W+++ ++ R
Sbjct: 203 TWEDLAKELIKE-PTVTISKIDC---TQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGAR 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,052,431
Number of Sequences: 53049
Number of extensions: 685400
Number of successful extensions: 2132
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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