Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30398
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   103   2e-22
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF100663-3|AAC68980.1|  529|Caenorhabditis elegans Udp-glucurono...    30   1.9  
AF106575-15|AAC78164.2|  350|Caenorhabditis elegans Serpentine r...    28   5.8  
Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  103 bits (246), Expect = 2e-22
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = -3

Query: 717 PSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQ 538
           P+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL    ++E  FRKF+LIAE VQ
Sbjct: 34  PNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSEADFRKFKLIAEDVQ 90

Query: 537 GRNVLCNFH 511
           G+NVL NFH
Sbjct: 91  GKNVLTNFH 99



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = -3

Query: 258 QVIPDSIAKYIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKS 79
           ++IPDSI K IEK C  +YPL++V IRKVK++KRP+ ++ +L +LH          G+K 
Sbjct: 185 KLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLH-GDSITVGADGEKV 243

Query: 78  ERPEGYEPPVQESV 37
           +RP+ YEPPVQ+ V
Sbjct: 244 DRPDDYEPPVQQEV 257



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
 Frame = -2

Query: 508 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCTPST--LR 335
           M +T DKL  +VKKW TLIEAN  VKTTDGY LRVF I FT K     +KT    T  +R
Sbjct: 101 MSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIR 160

Query: 334 SEQSE 320
             +SE
Sbjct: 161 KIRSE 165


>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
            R09E10.7 protein.
          Length = 1717

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
 Frame = -1

Query: 380  GLLEPT-QDVYAQHTQVRAIRKKMCEIITRDV-TNSELREVVNK*FL------TPLPSTS 225
            G+L+   Q V    TQ+R IR++  EII  D   N EL  +    FL      T  PSTS
Sbjct: 850  GILDQIWQTVPMSDTQIRKIRERASEIIESDSGNNGELPPIAMTKFLFLALYWTEPPSTS 909

Query: 224  RRPAMASTL 198
             RP  A ++
Sbjct: 910  IRPVPAQSV 918


>AF100663-3|AAC68980.1|  529|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein20 protein.
          Length = 529

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +1

Query: 208 AMAGLLDVLGNGVRNHLFTTSLSSELVTSRVMISHIFFLIALT*VCWAYTSCVGSRS 378
           A  G L  L N  R   F      +++   ++I+ IF  ++   V +A+  C+GSR+
Sbjct: 465 ARFGKLPSLDNYGRQQSFVEYFFLDIIAIFILITLIFLYVSFRIVKFAFRKCIGSRN 521


>AF106575-15|AAC78164.2|  350|Caenorhabditis elegans Serpentine
           receptor, class w protein91 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +3

Query: 315 FLSDCSDLSVLGVHVLRWLKES----LLVKPMQKTRRTYPSVVFTSMLASMRVCHFLTIH 482
           F S  + LS + +HV  WL        +   +  TR+   S    S++ S+ +C FL++ 
Sbjct: 23  FYSFIAKLSRISIHVEFWLSIFGGILTIFHFLVLTRKAMKSTSIISLMISVAICDFLSMI 82

Query: 483 LSLS 494
           +S+S
Sbjct: 83  VSIS 86


>Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical
           protein B0001.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -3

Query: 639 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 529
           L+G  + +S+ D +A TD E S +  R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,226,362
Number of Sequences: 27780
Number of extensions: 346142
Number of successful extensions: 1065
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)