Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30397
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   3.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   4.6  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    20   8.0  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   8.0  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +3

Query: 225 SANPD-ELVQEICKNPYSQNLLMHV*KLFNLNNIMKLN 335
           S +P+  L   I  NPY  + +     L  LNNI  L+
Sbjct: 331 STSPNLPLTHNIAHNPYPSHSIYPSSNLMPLNNIQNLS 368


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = -1

Query: 151 NKLSLSNGTVS---SVGYKFSTACFTPIVCFGGDGGLI 47
           +K ++S   V    S G   S  CF P +C G  G L+
Sbjct: 33  SKFAISENAVKPCVSCGPGQSGQCFGPSICCGPFGCLV 70


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +3

Query: 183 ENPHVREILELLDSSANPDELVQEICKNPYSQNLLMHV*KLFNLNNIMKLNI 338
           +NP+++ +L +  ++A+PD  V         +N+     + F   N   L++
Sbjct: 91  KNPNLKVMLSVGGATASPDSFVAAANDPEKMKNMTSSAIEFFETYNYDGLDV 142


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 195 VREILELLDSSANPDELVQEICKNPY 272
           ++  L LLDSS  P+ L+     N Y
Sbjct: 4   IKNKLLLLDSSTQPNYLILSNKNNTY 29


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 106 YTLQKIRYHW 135
           YT++ IRY W
Sbjct: 8   YTMRDIRYKW 17


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 106 YTLQKIRYHW 135
           YT++ IRY W
Sbjct: 190 YTMRDIRYKW 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,233
Number of Sequences: 336
Number of extensions: 1647
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)