Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30397
(406 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L40410-1|AAC41737.1| 152|Homo sapiens thyroid receptor interact... 34 0.21
BC017931-1|AAH17931.1| 155|Homo sapiens zinc finger, HIT type 3... 34 0.21
AF400652-1|AAM82423.1| 155|Homo sapiens thyroid hormone recepto... 34 0.21
AB209193-1|BAD92430.1| 129|Homo sapiens thyroid hormone recepto... 34 0.21
U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP... 31 1.9
CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein. 31 1.9
AF439399-1|AAQ04549.1| 173|Homo sapiens regulated endocrine-spe... 31 1.9
AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T... 31 1.9
AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein. 31 1.9
AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein. 31 1.9
BC016465-1|AAH16465.1| 1254|Homo sapiens TTC28 protein protein. 30 2.6
AL121825-2|CAH73824.1| 2481|Homo sapiens protein ( Human DNA seq... 30 2.6
AL050313-1|CAI17993.1| 2481|Homo sapiens protein ( Human DNA seq... 30 2.6
AL035453-1|CAI18760.1| 2481|Homo sapiens protein ( Human DNA seq... 30 2.6
AL035397-1|CAI18818.1| 2481|Homo sapiens protein ( Human DNA seq... 30 2.6
AL033538-2|CAI21502.1| 2481|Homo sapiens protein ( the GPR161 ge... 30 2.6
AL023281-1|CAI17985.1| 2481|Homo sapiens protein ( Human DNA seq... 30 2.6
AB028966-1|BAA82995.3| 2126|Homo sapiens KIAA1043 protein protein. 30 2.6
AK130406-1|BAC85345.1| 161|Homo sapiens protein ( Homo sapiens ... 29 5.9
AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein. 29 5.9
AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein. 29 5.9
>L40410-1|AAC41737.1| 152|Homo sapiens thyroid receptor interactor
protein.
Length = 152
Score = 33.9 bits (74), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 257 MQEPIFTEFVDACLKVVQP 313
MQEP+F EF D CL +V+P
Sbjct: 128 MQEPLFVEFADCCLGIVEP 146
>BC017931-1|AAH17931.1| 155|Homo sapiens zinc finger, HIT type 3
protein.
Length = 155
Score = 33.9 bits (74), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 257 MQEPIFTEFVDACLKVVQP 313
MQEP+F EF D CL +V+P
Sbjct: 131 MQEPLFVEFADCCLGIVEP 149
>AF400652-1|AAM82423.1| 155|Homo sapiens thyroid hormone receptor
interacting protein 3 protein.
Length = 155
Score = 33.9 bits (74), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 257 MQEPIFTEFVDACLKVVQP 313
MQEP+F EF D CL +V+P
Sbjct: 131 MQEPLFVEFADCCLGIVEP 149
>AB209193-1|BAD92430.1| 129|Homo sapiens thyroid hormone receptor
interactor 3 variant protein.
Length = 129
Score = 33.9 bits (74), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 257 MQEPIFTEFVDACLKVVQP 313
MQEP+F EF D CL +V+P
Sbjct: 105 MQEPLFVEFADCCLGIVEP 123
>U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP151
protein.
Length = 747
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 DTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDEL 245
+ V L+ + +N E+K+ LENP R++ + D + PDE+
Sbjct: 574 ENVKLELAEVQDNYKELKRSLENPAERKMEDGADGAFYPDEI 615
>CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein.
Length = 747
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 DTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDEL 245
+ V L+ + +N E+K+ LENP R++ + D + PDE+
Sbjct: 574 ENVKLELAEVQDNYKELKRSLENPAERKMEDGADGAFYPDEI 615
>AF439399-1|AAQ04549.1| 173|Homo sapiens regulated
endocrine-specific protein 18 isoform A protein.
Length = 173
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 24 KLHKQNPCIKPPSP--PKQTIGVKQAVENLYPTEDTVPLDRLN 146
+LH Q PC+K P +T ++ ++ L+P+E PL ++N
Sbjct: 92 RLHPQEPCLKDGKALFPTKTTEQEEKLQLLFPSETHSPLAKVN 134
>AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T6BP
protein.
Length = 747
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 DTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDEL 245
+ V L+ + +N E+K+ LENP R++ + D + PDE+
Sbjct: 574 ENVKLELAEVQDNYKELKRSLENPAERKMEDGADGAFYPDEI 615
>AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein.
Length = 747
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 DTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDEL 245
+ V L+ + +N E+K+ LENP R++ + D + PDE+
Sbjct: 574 ENVKLELAEVQDNYKELKRSLENPAERKMEDGADGAFYPDEI 615
>AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 DTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDEL 245
+ V L+ + +N E+K+ LENP R++ + D + PDE+
Sbjct: 423 ENVKLELAEVQDNYKELKRSLENPAERKMEDGADGAFYPDEI 464
>BC016465-1|AAH16465.1| 1254|Homo sapiens TTC28 protein protein.
Length = 1254
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 567 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 620
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 621 LISRAVKN 628
>AL121825-2|CAH73824.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone RP11-436C9 on chromosome 22. ).
Length = 2481
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1794 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1847
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1848 LISRAVKN 1855
>AL050313-1|CAI17993.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone CTA-754D9 on chromosome 22. ).
Length = 2481
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1794 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1847
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1848 LISRAVKN 1855
>AL035453-1|CAI18760.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone SC22CB-42E1 on chromosome 22q12.1-12.3. ).
Length = 2481
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1794 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1847
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1848 LISRAVKN 1855
>AL035397-1|CAI18818.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone RP6-45P1 on chromosome 22q11.22-12.3. ).
Length = 2481
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1794 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1847
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1848 LISRAVKN 1855
>AL033538-2|CAI21502.1| 2481|Homo sapiens protein ( the GPR161 gene
for G ).).
Length = 2481
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1794 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1847
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1848 LISRAVKN 1855
>AL023281-1|CAI17985.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone CTA-544A11 on chromosome 22q12.1-12.3.Contains
a 5'-nucleotidase (cytosolic II-like 1) (NT5C2L1) ).
Length = 2481
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1794 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1847
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1848 LISRAVKN 1855
>AB028966-1|BAA82995.3| 2126|Homo sapiens KIAA1043 protein protein.
Length = 2126
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 63 PPKQTIGVKQAVENLYPTEDTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDE 242
PP T G+ AV +PT D P DRL ++ + L NP ++ + +L+ +S ++
Sbjct: 1439 PP--TSGLPAAV--FFPTSD--PGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQ 1492
Query: 243 LVQEICKN 266
L+ KN
Sbjct: 1493 LISRAVKN 1500
>AK130406-1|BAC85345.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ26896 fis, clone RCT00464. ).
Length = 161
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 21 YKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVPLDRLNL 149
++L +P PPSP T Q+ LYP+EDT+P L L
Sbjct: 45 FQLPLFHPVCPPPSP-LTTPASAQSRPALYPSEDTLPSVELEL 86
>AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein.
Length = 457
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +3
Query: 30 HKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVPLDRL-----NLLENSTEVKKCLENPH 194
H QN I PPSP K IG+ + + L++ L+ L++P
Sbjct: 136 HSQNGFIVPPSPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPD 195
Query: 195 VREILE 212
VRE LE
Sbjct: 196 VREFLE 201
>AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +3
Query: 30 HKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVPLDRL-----NLLENSTEVKKCLENPH 194
H QN I PPSP K IG+ + + L++ L+ L++P
Sbjct: 201 HSQNGFIVPPSPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPD 260
Query: 195 VREILE 212
VRE LE
Sbjct: 261 VREFLE 266
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,252,908
Number of Sequences: 237096
Number of extensions: 882523
Number of successful extensions: 2513
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2513
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -