Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30395
(504 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 166 2e-40
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 113 3e-24
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 111 7e-24
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 100 2e-20
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 99 5e-20
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 97 2e-19
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 95 6e-19
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 83 3e-15
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 79 4e-14
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 77 2e-13
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 64 1e-09
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 64 2e-09
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 64 2e-09
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 62 5e-09
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 62 7e-09
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 61 2e-08
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 61 2e-08
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 60 4e-08
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 59 5e-08
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 56 3e-07
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 56 6e-07
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 52 7e-06
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 52 1e-05
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 50 2e-05
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 48 9e-05
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 48 9e-05
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 47 2e-04
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 46 4e-04
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 46 6e-04
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 44 0.003
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 42 0.010
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 38 0.097
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 38 0.097
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 38 0.17
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 1.6
UniRef50_Q8IYX2 Cluster: Putative uncharacterized protein; n=2; ... 34 2.1
UniRef50_A6RU12 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 34 2.1
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 3.7
UniRef50_Q9AA22 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 33 4.8
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 4.8
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 4.8
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 33 4.8
UniRef50_Q6ABZ1 Cluster: Serine/threonine kinase; n=1; Leifsonia... 32 6.4
UniRef50_Q17GP6 Cluster: AMP dependent ligase; n=2; Aedes aegypt... 32 6.4
UniRef50_UPI0000EBDEE2 Cluster: PREDICTED: hypothetical protein;... 32 8.5
UniRef50_A0P432 Cluster: Putative uncharacterized protein; n=2; ... 32 8.5
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 166 bits (404), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +1
Query: 1 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 180
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 181 FVDGLMIHSGDPCNDYVNTATRHVL 255
FVDGLMIHSGDP N YV+TA RHVL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVL 176
Score = 82.2 bits (194), Expect = 6e-15
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +3
Query: 255 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 401
LRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 177 LRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 113 bits (271), Expect = 3e-24
Identities = 52/83 (62%), Positives = 63/83 (75%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR RAKS K+
Sbjct: 95 RGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAARAKSQKYA 154
Query: 187 DGLMIHSGDPCNDYVNTATRHVL 255
DG MIHSG P D+++ A RHVL
Sbjct: 155 DGFMIHSGQPTRDFIDIAIRHVL 177
Score = 35.5 bits (78), Expect = 0.69
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +3
Query: 255 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRS 410
+RQGVLGIKVKIM + GP + PD + + E KDE + P V+S
Sbjct: 178 MRQGVLGIKVKIMKD-PAANRFGP-RALPDAVKIAEAKDEDEVI-PAPTVKS 226
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 111 bits (268), Expect = 7e-24
Identities = 51/81 (62%), Positives = 64/81 (79%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GCEV + GK++GQRAKSM F
Sbjct: 145 RGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKGQRAKSMTFR 204
Query: 187 DGLMIHSGDPCNDYVNTATRH 249
DG MI SG +V+TATRH
Sbjct: 205 DGYMIKSGTAHKHFVDTATRH 225
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 100 bits (239), Expect = 2e-20
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = +1
Query: 70 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRH 249
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 250 VL 255
L
Sbjct: 90 AL 91
Score = 51.6 bits (118), Expect = 1e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 237 CYQTCALRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 392
C + LRQG +G++VKIML D +G++GP P PD +++ PK++ +P
Sbjct: 86 CTRHALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 99.1 bits (236), Expect = 5e-20
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
+GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGKLRG RA + K+
Sbjct: 95 KGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGARASTSKYK 154
Query: 187 DGLMIHSGDPCNDYVNTATRHV 252
+G M+ SGD +V A H+
Sbjct: 155 EGYMVKSGDVTKQFVTQAVGHI 176
Score = 42.7 bits (96), Expect = 0.005
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 255 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 371
++Q +GI+V IML D G +GPK+ QPD I V E KD
Sbjct: 178 MKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/82 (50%), Positives = 61/82 (74%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
+GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++SGKL+ QRAK+MKF
Sbjct: 107 KGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQQRAKTMKFK 166
Query: 187 DGLMIHSGDPCNDYVNTATRHV 252
G MI +G P NDY++ A RHV
Sbjct: 167 QGYMICTGQPKNDYIDVAVRHV 188
Score = 41.9 bits (94), Expect = 0.008
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = +3
Query: 258 RQGVLGIKVKIMLPWDQQ--GKNGPKKPQPDHILVTEPK 368
+QG++G+KVKIMLP++ K G K P PD++++ PK
Sbjct: 191 KQGIMGVKVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPK 229
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 95.5 bits (227), Expect = 6e-19
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
+GLCA+ QA +R K++GG+ RRA L+ + A+GC+++VSGKL+GQRAKS+KF
Sbjct: 105 KGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQ 164
Query: 187 DGLMIHSGDPCNDYVNT 237
DG++IHSGD DY+NT
Sbjct: 165 DGVLIHSGDAVKDYINT 181
Score = 53.2 bits (122), Expect = 3e-06
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +3
Query: 240 YQTCALRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 371
Y T +QGV+GI+V+IMLP+D +G GP P PD I + EP +
Sbjct: 183 YATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 83.0 bits (196), Expect = 3e-15
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V+GKLR QRA++ KF
Sbjct: 100 RGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQRARANKFK 159
Query: 187 DGLMIHSGDPCNDYVNTATRHV 252
+G +I +G P ++ ATRH+
Sbjct: 160 EGCLISTGHPKRIFLAEATRHI 181
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 79.4 bits (187), Expect = 4e-14
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +1
Query: 103 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLSDKEY*ESR 282
+ ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N YV+T+ HVL + S+
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 283 SKSCCRGTSKARTARRS 333
+SC GT A RS
Sbjct: 140 CRSCFPGTQAVTLALRS 156
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 77.0 bits (181), Expect = 2e-13
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +1
Query: 19 AIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLM 198
AIAQAESLR+KL+GGL VRRA YGVL F+MESG +GCEV + +
Sbjct: 152 AIAQAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEV----------------IGWYI 195
Query: 199 IHSGDPCNDYVNTATRHVL 255
I SG P DY+N+ RHVL
Sbjct: 196 ISSGQPVKDYINSVVRHVL 214
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 192
L A A L + G R+A + LR +M +GA GCEVV+SGKL G R++ KFVDG
Sbjct: 90 LNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDG 149
Query: 193 LMIHSGDPCNDYVN 234
+ HSG+P + V+
Sbjct: 150 YIKHSGNPVEEVVD 163
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 192
L A QA L L G+ RRA Y LR IM +GARG E+ +SGKL G+RAKS++F G
Sbjct: 90 LNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQG 149
Query: 193 LMIHSGDPCNDYVN 234
+ G+P V+
Sbjct: 150 YLAKVGNPAETLVS 163
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 63.7 bits (148), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
A L L G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+G
Sbjct: 95 ASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTG 154
Query: 211 DPCNDYV 231
DP V
Sbjct: 155 DPAESMV 161
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
A L L G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G
Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163
Query: 211 DPCNDYV 231
+P ++Y+
Sbjct: 164 EPGDEYM 170
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 62.1 bits (144), Expect = 7e-09
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
AE L L G R+A +R IMESGA GCEV+V+GKL G R+++ KF +G + H G
Sbjct: 96 AERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCG 155
Query: 211 DPCNDYV 231
+P V
Sbjct: 156 EPSETIV 162
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/68 (45%), Positives = 42/68 (61%)
Frame = +1
Query: 52 LIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 231
L+ G+ RRA L IM +GARG E+V+SGKL QR ++ KF G + SG+P + V
Sbjct: 104 LVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELV 163
Query: 232 NTATRHVL 255
+ A HVL
Sbjct: 164 DEAIVHVL 171
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 61 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVN 234
G+ R+ + +R +M SGA+G ++VSGKL G+R+++ KF+DG M H G+P VN
Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVN 162
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 59.7 bits (138), Expect = 4e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 255 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 368
LRQGVLGIKVKIML WD GK GPK P PD++++ PK
Sbjct: 34 LRQGVLGIKVKIMLDWDPTGKLGPKTPLPDNVVIHMPK 71
Score = 48.4 bits (110), Expect = 9e-05
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1
Query: 160 QRAKSMKFVDGLMIHSGDPCNDYVNTATRHVL 255
QRAKSMKF DG M+ SG P +Y+++A RHVL
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVL 33
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 59.3 bits (137), Expect = 5e-08
Identities = 40/83 (48%), Positives = 45/83 (54%)
Frame = +1
Query: 7 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 186
RG AIAQAESLRYKL+GGLA+ L QRAKSMKF
Sbjct: 94 RGFYAIAQAESLRYKLLGGLAM--------------------------LCAQRAKSMKFK 127
Query: 187 DGLMIHSGDPCNDYVNTATRHVL 255
DG +I SG P DY++ A RHVL
Sbjct: 128 DGYLISSGQPVKDYIDLAVRHVL 150
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 255 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEP 365
LRQGVLGIKVKIM WD +GK P PD + + P
Sbjct: 150 LRQGVLGIKVKIMFNWDPKGKQSLTTPLPDLVTIQTP 186
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 56.4 bits (130), Expect = 3e-07
Identities = 35/81 (43%), Positives = 44/81 (54%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 192
L A A L L G RRA Y LR IM +GA G +V VSGKLRG+RA+ K++ G
Sbjct: 95 LDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAG 154
Query: 193 LMIHSGDPCNDYVNTATRHVL 255
+ SG+ + A HVL
Sbjct: 155 KVYKSGNQVVRLTDRAIAHVL 175
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 55.6 bits (128), Expect = 6e-07
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
A + L G+ RR Y +R IM +GA+G EV +SGK+RG R+ + KF DG + G
Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCG 154
Query: 211 DPCNDYV 231
+P +V
Sbjct: 155 EPSVKHV 161
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
A+ L L G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G
Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155
Query: 211 DPCNDYVNT 237
+P + V++
Sbjct: 156 EPAEEIVDS 164
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 73 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 237
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND++++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDS 212
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 50.4 bits (115), Expect = 2e-05
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 192
L A A L L G RRA + +R IM SGA G EV+VSGKL +RAK K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEG 150
Query: 193 LMIHSGDPCNDYVNTA 240
+ SG ++ A
Sbjct: 151 TVYKSGQQLEKIIDRA 166
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 48.4 bits (110), Expect = 9e-05
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 73 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 231
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD DYV
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMV-DYV 164
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 48.4 bits (110), Expect = 9e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 61 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 240
G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G + V A
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRA 175
Query: 241 TRHVL 255
HVL
Sbjct: 176 VVHVL 180
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/84 (29%), Positives = 50/84 (59%)
Frame = -1
Query: 255 EHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIAST 76
+H+S +V+ ++ ++RVDHE++ L G+ ++Q +N T T H ++++T+ +
Sbjct: 95 QHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGKSQHTVGGS 154
Query: 75 TYSETSDKLVS*RFGLGDSAKATS 4
++ +T +L FGL DS+ TS
Sbjct: 155 SHWQTVQQLGFQGFGL-DSSGQTS 177
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 192
L A A L L G RRA + +R IM +GA G E+++SGKL +RA+ K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEG 150
Query: 193 LMIHSGDPCNDYVNTA 240
++ SG ++ A
Sbjct: 151 IVYKSGQQLEKMIDRA 166
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 46.4 bits (105), Expect = 4e-04
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +1
Query: 61 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 240
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G + V A
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEA 163
Query: 241 TRHVL 255
VL
Sbjct: 164 VIPVL 168
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 45.6 bits (103), Expect = 6e-04
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 192
L A A L L G RRA + + IM++GARGC +++SGK+ G R + KF G
Sbjct: 94 LNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQG 153
Query: 193 LMIHSGDPCNDYVN 234
+ G+ +++
Sbjct: 154 HIKFCGETALQFMD 167
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
A+ + L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +SG
Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154
Query: 211 DP 216
+P
Sbjct: 155 EP 156
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 67 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
A RR L IM +GA G E+V++G+L GQR K+ +F G + +G
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 38.3 bits (85), Expect = 0.097
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 67 AVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 192
A RRA + +MESGARG +V++SG+L G ++A++ K ++G
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEG 172
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 38.3 bits (85), Expect = 0.097
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 210
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAG 156
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 189
L A AE++ +L G +A RRA + M GA G ++ VSG+L G + A+S F +
Sbjct: 110 LDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKE 169
Query: 190 G 192
G
Sbjct: 170 G 170
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 1.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 27 PGRISKIQAYRRSRCTSCLLWCSPFHH 107
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_Q8IYX2 Cluster: Putative uncharacterized protein; n=2;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 265
Score = 33.9 bits (74), Expect = 2.1
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 242 PDMCSQTRSTRNQGQNHVAVGPARQ-ERPEEATTRPHPGNRAQGRARAPRAD 394
P CS T S R++G PA+Q P A TRP PG+R G AR D
Sbjct: 76 PGSCSLTDSQRDEGHLDEERQPAQQVHEPHGAPTRPLPGHR-DGPARFGSGD 126
>UniRef50_A6RU12 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 4066
Score = 33.9 bits (74), Expect = 2.1
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +2
Query: 230 STLLPDMCSQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRA 391
++L PD+ +Q R R +GQ+ A P R P RP PG ++G + PRA
Sbjct: 3062 ASLPPDLAAQARQLR-RGQSDHAGHPGRA--PVGVIRRPAPGEESRGAPQQPRA 3112
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 33.9 bits (74), Expect = 2.1
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 13 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 189
L AI AE + KL R A +R M+SGA+G + VSG+L G A+S + +
Sbjct: 115 LNAIILAEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSE 174
Query: 190 GLM 198
G M
Sbjct: 175 GEM 177
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.1 bits (72), Expect = 3.7
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 87 WCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRW 191
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_Q9AA22 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 1026
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 440 DRLRQRRGREGAHFAGRLEGHGLVLGLCYQD 348
DR R+ GR+GA GRL G GL +G+ + +
Sbjct: 491 DRRRRPAGRDGAPVIGRLAGGGLAIGVAHAE 521
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 32.7 bits (71), Expect = 4.8
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 31 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 204
AE + +L ++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H
Sbjct: 116 AEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLH 175
Query: 205 SGDPCNDY 228
+ DY
Sbjct: 176 TFRADIDY 183
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 32.7 bits (71), Expect = 4.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 55 IGGLAVRRACYGVLR----FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 201
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 82 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 180
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 64 LAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 192
+A RRA G ++ + +GA+G +VSG+L G A+ ++ +G
Sbjct: 135 VAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEG 178
>UniRef50_Q6ABZ1 Cluster: Serine/threonine kinase; n=1; Leifsonia
xyli subsp. xyli|Rep: Serine/threonine kinase -
Leifsonia xyli subsp. xyli
Length = 974
Score = 32.3 bits (70), Expect = 6.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 278 QGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 388
+G A G A + PE R H G+ A G RAPR
Sbjct: 830 RGARDAAAGAAERHGPEWGPARDHGGDAAAGAVRAPR 866
>UniRef50_Q17GP6 Cluster: AMP dependent ligase; n=2; Aedes
aegypti|Rep: AMP dependent ligase - Aedes aegypti
(Yellowfever mosquito)
Length = 561
Score = 32.3 bits (70), Expect = 6.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 373 SSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPSTPCLRAHV 245
SS +++WSG GPF P + G++IL ++ P + A V
Sbjct: 3 SSYDPASKVWSGAKLPGPFNPQANLGHLILNVLERNPSMVAQV 45
>UniRef50_UPI0000EBDEE2 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 180
Score = 31.9 bits (69), Expect = 8.5
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 296 AVGP-ARQERPEEATTRPHPGNRAQGRARAPRA 391
AV P AR+ A T P PG RA GR RAP A
Sbjct: 78 AVSPGARKPHFGAAATHPAPGGRAGGRGRAPGA 110
>UniRef50_A0P432 Cluster: Putative uncharacterized protein; n=2;
Rhodobacteraceae|Rep: Putative uncharacterized protein -
Stappia aggregata IAM 12614
Length = 460
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 25 AQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGL 195
A AESL L A++R G+ F + + R C+V++ G + ++ +D L
Sbjct: 87 ADAESLLRSLTAARAIQRTGDGLTDFHLTAFGRSCQVIIGGDCLDKGPSNLDLLDSL 143
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,695,705
Number of Sequences: 1657284
Number of extensions: 9562732
Number of successful extensions: 33861
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 31947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33754
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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