Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30395
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.51 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.51 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.89 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.89 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   4.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   8.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   8.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   8.3  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   8.3  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    21   8.3  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 107 WNLVPVVVKLLYLASC 154
           WNL+P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 107 WNLVPVVVKLLYLASC 154
           WNL+P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 105 DETENTIASTTYSETSDKLVS*RFGLG 25
           DET+N  +  TY+E  +KL      LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 105 DETENTIASTTYSETSDKLVS*RFGLG 25
           DET+N  +  TY+E  +KL      LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +3

Query: 303 DQQGKNGPKKPQP--DHILVTEP 365
           D Q +N PK+P+P  D   VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +2

Query: 206 LETLAMITSTLLPDMCSQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAP 385
           L+   +I +   P  C + R  R + ++H+       E  EEA   P P  RA G A A 
Sbjct: 234 LKAHVLIHTNEKPFECDKCRG-RFRRRHHLVHHKCGGE--EEAERAPAPAVRAAGDAAAA 290

Query: 386 R 388
           R
Sbjct: 291 R 291


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 139 QQLHNH--GHQIP**NGEHHSKHDVQRDL 59
           Q ++NH  GH +   + +HH  H  Q+ +
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 188


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 139 QQLHNH--GHQIP**NGEHHSKHDVQRDL 59
           Q ++NH  GH +   + +HH  H  Q+ +
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 190


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 396 WSARGARARPWALL 355
           WS  G    PWAL+
Sbjct: 219 WSMSGTMLVPWALM 232


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 396 WSARGARARPWALL 355
           WS  G    PWAL+
Sbjct: 219 WSMSGTMLVPWALM 232


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 396 WSARGARARPWALL 355
           WS  G    PWAL+
Sbjct: 219 WSMSGTMLVPWALM 232


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 396 WSARGARARPWALL 355
           WS  G    PWAL+
Sbjct: 219 WSMSGTMLVPWALM 232


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 396 WSARGARARPWALL 355
           WS  G    PWAL+
Sbjct: 219 WSMSGTMLVPWALM 232


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 PCWSHGNMILTLIPSTPCLRAHVW 242
           PC S   ++ +LI S  CL  +V+
Sbjct: 65  PCISRHPVLKSLIGSEDCLTLNVY 88


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 PCWSHGNMILTLIPSTPCLRAHVW 242
           PC S   ++ +LI S  CL  +V+
Sbjct: 65  PCISRHPVLKSLIGSEDCLTLNVY 88


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 PCWSHGNMILTLIPSTPCLRAHVW 242
           PC S   ++ +LI S  CL  +V+
Sbjct: 65  PCISRHPVLKSLIGSEDCLTLNVY 88


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 PCWSHGNMILTLIPSTPCLRAHVW 242
           PC S   ++ +LI S  CL  +V+
Sbjct: 65  PCISRHPVLKSLIGSEDCLTLNVY 88


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 PCWSHGNMILTLIPSTPCLRAHVW 242
           PC S   ++ +LI S  CL  +V+
Sbjct: 64  PCISRHPVLKSLIGSEDCLTLNVY 87


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 PCWSHGNMILTLIPSTPCLRAHVW 242
           PC S   ++ +LI S  CL  +V+
Sbjct: 37  PCISRHPVLKSLIGSEDCLTLNVY 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,741
Number of Sequences: 336
Number of extensions: 2355
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)