Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30392
(812 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin... 181 3e-45
AY486135-1|AAS64748.1| 436|Homo sapiens apoptosis-regulated pro... 181 3e-45
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr... 181 3e-45
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein. 181 3e-45
AY486134-1|AAS64747.1| 437|Homo sapiens apoptosis-regulated pro... 177 3e-44
AK222905-1|BAD96625.1| 398|Homo sapiens U5 snRNP-specific prote... 93 1e-18
BC039004-1|AAH39004.1| 612|Homo sapiens carnitine O-octanoyltra... 30 8.7
AF168793-1|AAF03234.1| 612|Homo sapiens peroxisomal carnitine o... 30 8.7
AF073770-1|AAD41654.1| 612|Homo sapiens carnitine octanoyltrans... 30 8.7
>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
factor 8 homolog (S. cerevisiae) protein.
Length = 2335
Score = 181 bits (440), Expect = 3e-45
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +2
Query: 2 ANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 181
ANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE
Sbjct: 1736 ANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 1795
Query: 182 GNLTTKPINGAIFIFNPRTGQLFLK 256
GNLTTKPINGAIFIFNPRTGQLFLK
Sbjct: 1796 GNLTTKPINGAIFIFNPRTGQLFLK 1820
Score = 177 bits (430), Expect = 5e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 435
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP
Sbjct: 1821 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1880
Query: 436 NIVIKGSELQLPFQACLKVEKFGD 507
NIVIKGSELQLPFQACLKVEKFGD
Sbjct: 1881 NIVIKGSELQLPFQACLKVEKFGD 1904
Score = 92.7 bits (220), Expect = 1e-18
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 626 VNTERTKVLLKPDKTTFTEPHHIWPTLTDDDWIKVEVQLKDLILADMERR 775
VN +R KV+LKPDKTT TEPHHIWPTLTD++WIKVEVQLKDLILAD ++
Sbjct: 1945 VNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKK 1994
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 510 ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 623
ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL
Sbjct: 1906 ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 1943
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 763 YGKKTNVNVASLTQSE 810
YGKK NVNVASLTQSE
Sbjct: 1991 YGKKNNVNVASLTQSE 2006
>AY486135-1|AAS64748.1| 436|Homo sapiens apoptosis-regulated
protein 1 protein.
Length = 436
Score = 181 bits (440), Expect = 3e-45
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +2
Query: 2 ANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 181
ANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE
Sbjct: 234 ANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 293
Query: 182 GNLTTKPINGAIFIFNPRTGQLFLK 256
GNLTTKPINGAIFIFNPRTGQLFLK
Sbjct: 294 GNLTTKPINGAIFIFNPRTGQLFLK 318
Score = 175 bits (426), Expect = 2e-43
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 435
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP
Sbjct: 319 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 378
Query: 436 NIVIKGSELQLPFQACLKVEKFGD 507
NIVIKGSELQLPFQACLKVE+FGD
Sbjct: 379 NIVIKGSELQLPFQACLKVEEFGD 402
Score = 67.3 bits (157), Expect = 6e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ILKATEPQMVLFNLYDDWLKTISSYTAFSRL 602
ILKATEPQMVLFNLYDDWLKTISSYTAFSR+
Sbjct: 404 ILKATEPQMVLFNLYDDWLKTISSYTAFSRI 434
>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
protein.
Length = 2335
Score = 181 bits (440), Expect = 3e-45
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +2
Query: 2 ANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 181
ANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE
Sbjct: 1736 ANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 1795
Query: 182 GNLTTKPINGAIFIFNPRTGQLFLK 256
GNLTTKPINGAIFIFNPRTGQLFLK
Sbjct: 1796 GNLTTKPINGAIFIFNPRTGQLFLK 1820
Score = 177 bits (430), Expect = 5e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 435
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP
Sbjct: 1821 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 1880
Query: 436 NIVIKGSELQLPFQACLKVEKFGD 507
NIVIKGSELQLPFQACLKVEKFGD
Sbjct: 1881 NIVIKGSELQLPFQACLKVEKFGD 1904
Score = 92.7 bits (220), Expect = 1e-18
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 626 VNTERTKVLLKPDKTTFTEPHHIWPTLTDDDWIKVEVQLKDLILADMERR 775
VN +R KV+LKPDKTT TEPHHIWPTLTD++WIKVEVQLKDLILAD ++
Sbjct: 1945 VNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKK 1994
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 510 ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 623
ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL
Sbjct: 1906 ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 1943
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 763 YGKKTNVNVASLTQSE 810
YGKK NVNVASLTQSE
Sbjct: 1991 YGKKNNVNVASLTQSE 2006
>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
Length = 2335
Score = 181 bits (440), Expect = 3e-45
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +2
Query: 2 ANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 181
ANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE
Sbjct: 1736 ANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 1795
Query: 182 GNLTTKPINGAIFIFNPRTGQLFLK 256
GNLTTKPINGAIFIFNPRTGQLFLK
Sbjct: 1796 GNLTTKPINGAIFIFNPRTGQLFLK 1820
Score = 174 bits (423), Expect = 4e-43
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 435
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRK MLDPLEVHLLDFP
Sbjct: 1821 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKDMLDPLEVHLLDFP 1880
Query: 436 NIVIKGSELQLPFQACLKVEKFGD 507
NIVIKGSELQLPFQACLKVEKFGD
Sbjct: 1881 NIVIKGSELQLPFQACLKVEKFGD 1904
Score = 92.7 bits (220), Expect = 1e-18
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 626 VNTERTKVLLKPDKTTFTEPHHIWPTLTDDDWIKVEVQLKDLILADMERR 775
VN +R KV+LKPDKTT TEPHHIWPTLTD++WIKVEVQLKDLILAD ++
Sbjct: 1945 VNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKK 1994
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 510 ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 623
ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL
Sbjct: 1906 ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL 1943
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 763 YGKKTNVNVASLTQSE 810
YGKK NVNVASLTQSE
Sbjct: 1991 YGKKNNVNVASLTQSE 2006
>AY486134-1|AAS64747.1| 437|Homo sapiens apoptosis-regulated
protein 2 protein.
Length = 437
Score = 177 bits (432), Expect = 3e-44
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +2
Query: 2 ANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 181
ANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE
Sbjct: 235 ANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFE 294
Query: 182 GNLTTKPINGAIFIFNPRTGQLFLK 256
GNLTTKPINGAIFIFN RTGQLFLK
Sbjct: 295 GNLTTKPINGAIFIFNTRTGQLFLK 319
Score = 177 bits (430), Expect = 5e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 435
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP
Sbjct: 320 IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP 379
Query: 436 NIVIKGSELQLPFQACLKVEKFGD 507
NIVIKGSELQLPFQACLKVEKFGD
Sbjct: 380 NIVIKGSELQLPFQACLKVEKFGD 403
Score = 67.3 bits (157), Expect = 6e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ILKATEPQMVLFNLYDDWLKTISSYTAFSRL 602
ILKATEPQMVLFNLYDDWLKTISSYTAFSR+
Sbjct: 405 ILKATEPQMVLFNLYDDWLKTISSYTAFSRI 435
>AK222905-1|BAD96625.1| 398|Homo sapiens U5 snRNP-specific protein
variant protein.
Length = 398
Score = 92.7 bits (220), Expect = 1e-18
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 626 VNTERTKVLLKPDKTTFTEPHHIWPTLTDDDWIKVEVQLKDLILADMERR 775
VN +R KV+LKPDKTT TEPHHIWPTLTD++WIKVEVQLKDLILAD ++
Sbjct: 8 VNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKK 57
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 763 YGKKTNVNVASLTQSE 810
YGKK NVNVASLTQSE
Sbjct: 54 YGKKNNVNVASLTQSE 69
>BC039004-1|AAH39004.1| 612|Homo sapiens carnitine
O-octanoyltransferase protein.
Length = 612
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 5 NPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII 127
+P L E+I+ +L +YS E + P+++ ++Y E+ + +I
Sbjct: 259 DPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILI 299
>AF168793-1|AAF03234.1| 612|Homo sapiens peroxisomal carnitine
octanoyltransferase protein.
Length = 612
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 5 NPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII 127
+P L E+I+ +L +YS E + P+++ ++Y E+ + +I
Sbjct: 259 DPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILI 299
>AF073770-1|AAD41654.1| 612|Homo sapiens carnitine
octanoyltransferase protein.
Length = 612
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 5 NPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII 127
+P L E+I+ +L +YS E + P+++ ++Y E+ + +I
Sbjct: 259 DPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILI 299
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,262,038
Number of Sequences: 237096
Number of extensions: 2615807
Number of successful extensions: 4690
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4690
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -