Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30391
(302 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 89 2e-18
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 89 2e-18
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 89 2e-18
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 89 2e-18
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 89 2e-18
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 89 2e-18
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 89 2e-18
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 89 2e-18
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 89 2e-18
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 29 2.0
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 29 2.0
U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein. 29 2.0
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 29 2.0
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 29 2.0
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 29 2.0
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 29 2.0
BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein. 29 2.7
AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, mem... 29 2.7
AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, mem... 29 2.7
AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein. 29 2.7
BC009296-1|AAH09296.1| 360|Homo sapiens mitochondrial ribosomal... 29 3.5
AK075436-1|BAC11619.1| 218|Homo sapiens protein ( Homo sapiens ... 29 3.5
AF321613-1|AAK01406.1| 360|Homo sapiens GIBT protein protein. 29 3.5
AF226045-1|AAF86945.1| 360|Homo sapiens GK002 protein. 29 3.5
BC028614-1|AAH28614.1| 963|Homo sapiens Ras interacting protein... 27 8.1
BC021860-1|AAH21860.1| 317|Homo sapiens RASIP1 protein protein. 27 8.1
AY378097-1|AAR24580.1| 962|Homo sapiens Ras-interacting protein... 27 8.1
AK000408-1|BAA91145.1| 317|Homo sapiens protein ( Homo sapiens ... 27 8.1
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 57
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 34 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 204
MAKSKNHT HNQ+RK HRNGIKKPR R+ES G+DPKFLRN RF KK N K K++
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKM 72
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II protein.
Length = 1031
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 950 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 989
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 1540 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 1579
>U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 269 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 308
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 404 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 443
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 636 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 675
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 1517 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 1556
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 22 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 141
K+ K + S+N ++N RK + KKP+KT + +D
Sbjct: 928 KKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVD 967
>BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein.
Length = 1299
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 212 RLREKLPEKQRPRNDISYKQI 274
RLR +LP KQ+P DISYK++
Sbjct: 937 RLRHRLPNKQQP-PDISYKEL 956
>AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, member
4 protein.
Length = 1298
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 212 RLREKLPEKQRPRNDISYKQI 274
RLR +LP KQ+P DISYK++
Sbjct: 936 RLRHRLPNKQQP-PDISYKEL 955
>AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, member
4 protein.
Length = 1298
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 212 RLREKLPEKQRPRNDISYKQI 274
RLR +LP KQ+P DISYK++
Sbjct: 936 RLRHRLPNKQQP-PDISYKEL 955
>AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein.
Length = 1348
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 212 RLREKLPEKQRPRNDISYKQI 274
RLR +LP KQ+P DISYK++
Sbjct: 986 RLRHRLPNKQQP-PDISYKEL 1005
>BC009296-1|AAH09296.1| 360|Homo sapiens mitochondrial ribosomal
protein S22 protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 114 QARIHPWHGSKIFKESKVLQEG*PE---ASQATREGG*EKSYPRSKGQEMTLVISK*T 278
+ARI PWHG + + G P +S+A G E P +E+ +++K T
Sbjct: 26 RARIQPWHGGLLQPLPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILTKMT 83
>AK075436-1|BAC11619.1| 218|Homo sapiens protein ( Homo sapiens
cDNA PSEC0127 fis, clone PLACE1003724, highly similar to
Mitochondrial 28S ribosomal protein S22. ).
Length = 218
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 114 QARIHPWHGSKIFKESKVLQEG*PE---ASQATREGG*EKSYPRSKGQEMTLVISK*T 278
+ARI PWHG + + G P +S+A G E P +E+ +++K T
Sbjct: 26 RARIQPWHGGLLQPLPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILTKMT 83
>AF321613-1|AAK01406.1| 360|Homo sapiens GIBT protein protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 114 QARIHPWHGSKIFKESKVLQEG*PE---ASQATREGG*EKSYPRSKGQEMTLVISK*T 278
+ARI PWHG + + G P +S+A G E P +E+ +++K T
Sbjct: 26 RARIQPWHGGLLQPLPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILTKMT 83
>AF226045-1|AAF86945.1| 360|Homo sapiens GK002 protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 114 QARIHPWHGSKIFKESKVLQEG*PE---ASQATREGG*EKSYPRSKGQEMTLVISK*T 278
+ARI PWHG + + G P +S+A G E P +E+ +++K T
Sbjct: 26 RARIQPWHGGLLQPLPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILTKMT 83
>BC028614-1|AAH28614.1| 963|Homo sapiens Ras interacting protein 1
protein.
Length = 963
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 29 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLAW 139
+ W S R A+L ++S Q PG PP AW
Sbjct: 849 ASWSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPAAW 885
>BC021860-1|AAH21860.1| 317|Homo sapiens RASIP1 protein protein.
Length = 317
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 29 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLAW 139
+ W S R A+L ++S Q PG PP AW
Sbjct: 203 ASWSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPAAW 239
>AY378097-1|AAR24580.1| 962|Homo sapiens Ras-interacting protein
protein.
Length = 962
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 29 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLAW 139
+ W S R A+L ++S Q PG PP AW
Sbjct: 848 ASWSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPAAW 884
>AK000408-1|BAA91145.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ20401 fis, clone KAT00901. ).
Length = 317
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 29 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLAW 139
+ W S R A+L ++S Q PG PP AW
Sbjct: 203 ASWSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPAAW 239
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,367,635
Number of Sequences: 237096
Number of extensions: 751669
Number of successful extensions: 1879
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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