Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30390
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...   188   3e-48
Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AL110485-25|CAB60373.1|  672|Caenorhabditis elegans Hypothetical...    28   8.8  
AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical protein
            T23D8.4 protein.
          Length = 898

 Score =  188 bits (459), Expect = 3e-48
 Identities = 108/254 (42%), Positives = 162/254 (63%), Gaps = 5/254 (1%)
 Frame = +1

Query: 1    VKEAHGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINLELLECV 180
            ++EAH  L+E+  T + KELLAQ +   RQHE++ EQEKI++ RQ+P+HMHIN+EL+ECV
Sbjct: 584  IREAHQGLSEIQNTQRAKELLAQAV-GTRQHEKTAEQEKIDRSRQVPYHMHINVELMECV 642

Query: 181  YLVSAMLIEIPYMAAHEFDARRRMIVKLSIKIYVLVNVRRLSALLSRCESTQCGCKGHAQ 360
            YL+ +ML+EIP+MA+ EF+ RRRM   LS   +  +     ++L    E+T+      ++
Sbjct: 643  YLICSMLLEIPHMASCEFEMRRRM---LSRSFHYQLKQSEKASLTGPPENTREHVVAASK 699

Query: 361  R*LESLPK-----LHRE*KNECQGLGFNGRXXXXXXNARSSYT*RVPTYLSVHISHVYAS 525
              L    K     +  +  N+     F+          R      + TYL  + S VYA+
Sbjct: 700  AMLNGDWKKCQDYIVNDKMNQKVWNLFHNAETVKGMVVRRIQEESLRTYLLTY-STVYAT 758

Query: 526  LSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECAILHRSEPTRMQALALQLAD 705
            +SL+ LAD+FEL ++ VHS++SKMII EEL A+LD+P++C I+HR EP+R+Q LAL L+D
Sbjct: 759  VSLKKLADLFELSKKDVHSIISKMIIQEELSATLDEPTDCLIMHRVEPSRLQMLALNLSD 818

Query: 706  KVGNLVDSNERIFE 747
            K+  L ++NE+I E
Sbjct: 819  KLQTLAENNEQILE 832



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 31/51 (60%), Positives = 39/51 (76%)
 Frame = +2

Query: 362 GDWRACLNYIVNEKMNAKVWDLMVGADNVRAMLGRLIREESLRTYLFTYLT 514
           GDW+ C +YIVN+KMN KVW+L   A+ V+ M+ R I+EESLRTYL TY T
Sbjct: 704 GDWKKCQDYIVNDKMNQKVWNLFHNAETVKGMVVRRIQEESLRTYLLTYST 754



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +3

Query: 255 SKTFYQNLRASERQALVGPPESMREHAV 338
           S++F+  L+ SE+ +L GPPE+ REH V
Sbjct: 668 SRSFHYQLKQSEKASLTGPPENTREHVV 695


>Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical
           protein R74.6 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 88  QHERSKEQEKIEKQRQMPFHMHINLELLECVYLVSAMLIEIPYM 219
           QHE  K  EK  +     F  H+NL++++CV + S   ++  +M
Sbjct: 177 QHE--KGLEKFYEAVSTAFMRHVNLQVVKCVIVASRGFVKDAFM 218


>AL110485-25|CAB60373.1|  672|Caenorhabditis elegans Hypothetical
           protein Y46G5A.31 protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = +1

Query: 1   VKEAHGCLAELMMTGKPKELLAQGL-------LPQRQHERSKEQEKIEKQRQMPFHMHIN 159
           V E  G  AE  +  KP  L   GL       L + Q+  ++ +EKI +  +  FH H++
Sbjct: 276 VSEITGLEAEHFLCRKPDVLTPNGLNVVKFAALHEFQNLHAQNKEKINQFIRGHFHGHLD 335

Query: 160 LELLECVYLVSA 195
            +L + +Y  +A
Sbjct: 336 FDLDKTLYFFTA 347


>AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK6.2 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = -1

Query: 752 CFSNIRSFESTKFPTLSASCSARACIRVGSERCKIAHSLGSSNDAK 615
           CF     FE   F    A+C  + C+ VG       H LG  N  K
Sbjct: 45  CFLGENCFERPPFTRKCAACRFQKCLHVGMSLPSFLH-LGEQNKEK 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,043,615
Number of Sequences: 27780
Number of extensions: 381198
Number of successful extensions: 1113
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)