Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30389
(790 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.17
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 27 0.17
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 27 0.17
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 27 0.17
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 27 0.17
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 27 0.17
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 27 0.17
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 27 0.23
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 27 0.23
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 25 0.69
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 25 0.69
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 4.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 8.5
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 8.5
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.5
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 277 KEHKMASMNIVPYHMSPYGHP 297
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 277 KEHKMASMNIVPYHMSPYGHP 297
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 277 KEHKMASMNIVPYHMSPYGHP 297
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 233 KEHKMASMNIVPYHMSPYGHP 253
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 277 KEHKMASMNIVPYHMSPYGHP 297
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 65 KEHKMASMNIVPYHMSPYGHP 85
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 165 KSHSSISTHVYPFHW*PLGHP 103
K H S ++ P+H P GHP
Sbjct: 277 KEHKMASMNIVPYHMSPYGHP 297
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 26.6 bits (56), Expect = 0.23
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3
Query: 335 QLARPSAHSSTSTQCSLRLSLPVPRQPGYL*TLEDTAHR*SRLLRYDTRPDHHR 174
QL RPS +TS L LP+ +PG L H S+LLR+ D R
Sbjct: 324 QLRRPS-DGATSEALPFEL-LPLDSEPGMLKRKRQKYHDPSQLLRHVEESDKQR 375
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 26.6 bits (56), Expect = 0.23
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 334 CPRGRLC-VNTPGSYIC-VPCGGHYYVNTTRPCFDPDSLVKRCDPSYCRRFNAVC 492
C G +C ++ G YIC P G N T D + CD + C+ +A+C
Sbjct: 385 CQNGGVCRISDGGGYICDCPSG----TNGTNCEIDT---INECDSNPCKHLDAIC 432
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 307 DECADGRANCPRGRLCVNTPGSYIC 381
++C + +C G C++ SYIC
Sbjct: 25 EDCTE--TSCMNGGTCIDGINSYIC 47
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 32 TLRSPAARERRCMPKSTSPYYECEGCPSGYQW 127
+L + A R +P T + C CP+ Y W
Sbjct: 484 SLPNSCALTTRELPGETLRLFTCMECPNNYPW 515
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 32 TLRSPAARERRCMPKSTSPYYECEGCPSGYQW 127
+L + A R +P T + C CP+ Y W
Sbjct: 491 SLPNSCALTTRELPGETLRLFTCMECPNNYPW 522
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 340 LDSWLVRQRTRPHPRNVP 287
+ +W VR PRNVP
Sbjct: 17 MPTWFVRWLNSQQPRNVP 34
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +3
Query: 561 DLDGHPDEQLPCNEPRCKKDNC 626
D+D P+ PC+ C +C
Sbjct: 152 DIDNDPNRAPPCDPAVCVLPDC 173
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +2
Query: 68 MPKSTSPYYECEGCPSGYQW 127
+P T C CP+ Y W
Sbjct: 505 VPGETINLQTCVRCPNNYPW 524
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 495 FRTKVVCNTGWTGNGT 542
FRTK++ T NGT
Sbjct: 103 FRTKILAQVHGTNNGT 118
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 14 SASTCVTLRSPAARERRCMPKSTS 85
+ S C SPA+ +R P+ST+
Sbjct: 927 AGSPCRNSASPASSDRSGTPRSTN 950
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,518
Number of Sequences: 336
Number of extensions: 4312
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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