Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30389
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 45 6e-05
06_03_1325 - 29334401-29334859,29335163-29335857,29336538-293367... 42 4e-04
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 41 0.001
10_02_0091 - 5190536-5191794,5191878-5192030,5192501-5193099,519... 39 0.004
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 39 0.005
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966 38 0.012
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 37 0.016
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 37 0.021
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 36 0.028
09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957 36 0.037
06_03_1036 + 27053480-27053729,27054616-27054704,27054881-270549... 36 0.037
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 36 0.049
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 35 0.085
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 35 0.085
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 35 0.085
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 35 0.085
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572... 34 0.11
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 34 0.11
12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009 34 0.15
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 34 0.15
10_02_0060 - 4808506-4808535,4808564-4809588,4810125-4810292,481... 33 0.26
09_04_0476 - 17922072-17922469,17922546-17923241,17923405-179235... 33 0.26
04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029 33 0.26
02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072 33 0.26
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 33 0.34
11_08_0023 + 27741775-27742475,27744163-27744413,27744557-277447... 32 0.45
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 32 0.45
09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784 32 0.45
01_03_0307 + 14879564-14879594,14880024-14880182,14880629-14881857 32 0.45
12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104 31 0.79
10_01_0054 - 773395-774518,776957-777124,777455-778376 31 0.79
08_02_1157 + 24765719-24766544,24766569-24766637,24767031-247671... 31 0.79
07_01_0495 + 3722319-3722517,3723325-3723482,3723652-3723929,372... 31 0.79
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 31 0.79
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 31 1.4
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767... 30 1.8
04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313 30 1.8
02_05_1158 - 34550049-34551241,34551354-34551521,34551847-345522... 30 1.8
01_01_0707 - 5453933-5454619 30 1.8
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154... 30 2.4
08_02_1286 - 25882773-25883771 30 2.4
08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544 30 2.4
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 30 2.4
09_06_0280 + 22010270-22011407,22011890-22013097 29 3.2
05_01_0242 + 1804183-1806096 29 3.2
03_03_0091 - 14371528-14372661 29 3.2
12_01_0377 - 2939384-2939505,2939629-2939695,2940324-2940543,294... 29 4.2
05_05_0036 - 21758409-21758531,21758891-21759206,21759964-217611... 29 4.2
03_02_0359 - 7788382-7788522,7788931-7789837,7791227-7791337,779... 29 4.2
12_02_1103 + 26116614-26117607,26118060-26118242,26118344-26119518 29 5.6
11_08_0019 + 27697918-27698609,27701107-27701372,27701778-277019... 29 5.6
10_08_0514 + 18465474-18465760,18465888-18465978,18466670-184667... 29 5.6
07_01_0639 - 4785446-4786186,4786429-4786656,4786727-4786872,478... 29 5.6
07_01_0286 + 2086630-2086856,2087052-2087067 29 5.6
06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936... 29 5.6
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 29 5.6
05_03_0170 - 9132207-9133010,9133232-9133894 29 5.6
04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988... 29 5.6
04_03_0184 + 12395349-12395542,12396821-12397467,12398119-123986... 29 5.6
03_02_0580 + 9615646-9616647 29 5.6
02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263 29 5.6
11_08_0003 + 27492503-27492812,27492863-27493148,27495399-274956... 28 9.7
05_06_0057 + 25253497-25253589,25253722-25253799,25254583-252546... 28 9.7
05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213 28 9.7
04_04_0176 - 23329589-23331043 28 9.7
>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDPD 438
GN + C+DV+EC ++ CP+G C NT G Y C G T C +PD
Sbjct: 1401 GNPYITDGCIDVNECEQNQSPCPKGATCRNTEGWYHCSCPVGRKLAKETNTC-NPD 1455
>06_03_1325 -
29334401-29334859,29335163-29335857,29336538-29336750,
29338791-29339472,29339781-29340020
Length = 762
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC-VPCGGH 399
GN C D+D CA G CP G +C N PG + C P G H
Sbjct: 298 GNPYLPGGCTDIDVCAPGNDGCPDGMICSNFPGGHNCSCPEGEH 341
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHY 402
GN C D++ECA+ G LC+NTPG+++C G Y
Sbjct: 256 GNASILNGCQDINECAEPEKYSCYGGLCINTPGAFVCRCHDGSY 299
>10_02_0091 -
5190536-5191794,5191878-5192030,5192501-5193099,
5193771-5193837,5194177-5195170
Length = 1023
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGH 399
PG+RG N + C D+DEC + C +G +C NT G+Y C C H
Sbjct: 540 PGYRG--NPYILDGCEDIDECRETPGIC-KG-VCKNTVGNYSCTKCPDH 584
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 217 HLWAVSSRVHR*PGWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC-VPCG 393
H + + + H G++G N R C D+DEC + G C NTPGS+IC P G
Sbjct: 287 HAYDLGYKCHCSDGYQG--NPYIRGGCHDIDECKSPQDYSCYGN-CNNTPGSHICDCPRG 343
Query: 394 GHYYVNTTRPCFDPD 438
+T C D D
Sbjct: 344 YERNASTPNGCKDID 358
>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
Length = 766
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ETVGSASTCVTLRSPAARERRCMPKSTSPYYECEGCPSGYQWNGYT------CVDMDEC- 160
ET A V + + +C S P Y C C GYQ N Y C D+DEC
Sbjct: 265 ETCDKARRKVDTYACVSHNSKCFNSSNGPGYICN-CSEGYQGNPYLQDGQHGCTDIDECA 323
Query: 161 DLIRPCDDLVSCRN 202
D PC +C N
Sbjct: 324 DPKYPCSVPGTCHN 337
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 256 GWRGTGNERRREH-CVDVDECADGRANCPRGRLCVNTPGSYICV 384
G++G + +H C D+DECAD + C C N PG + C+
Sbjct: 302 GYQGNPYLQDGQHGCTDIDECADPKYPCSVPGTCHNLPGGFECL 345
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVN 411
GN ++ C D+DEC + A P +C NT G++ C G Y +N
Sbjct: 286 GNPYIKDGCKDIDECLNN-ATYPCKGICTNTLGNFTCSCSPGSYMMN 331
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVN 411
GN ++ C D++EC D A P +C NT G++ C G+Y +N
Sbjct: 303 GNPYVKDGCKDINECLDN-ATYPCPGICKNTLGNFTCSCYPGNYMMN 348
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGH--YYVNTTRP 423
PG++G G HC DVDEC++ A +CP C NT GS+ C C G+ Y+
Sbjct: 507 PGFKGDGL-----HCEDVDECSEKLACSCPHCS-CKNTWGSFDC-SCHGNNLMYIKAEDT 559
Query: 424 C 426
C
Sbjct: 560 C 560
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 107 CPSGYQWNGYTCVDMDECDLIRPCD-DLVSCRN 202
CP G++ +G C D+DEC C SC+N
Sbjct: 505 CPPGFKGDGLHCEDVDECSEKLACSCPHCSCKN 537
>09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957
Length = 533
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTT 417
GN ++ C D++EC D P +C NT GS+ C G+Y N T
Sbjct: 79 GNPYIKDGCEDINECLDN-VTYPCPGICNNTMGSFTCSCHQGNYMENGT 126
>06_03_1036 +
27053480-27053729,27054616-27054704,27054881-27054950,
27055145-27055228,27055332-27055408,27055519-27055583,
27055723-27055765,27055889-27055952,27056126-27056254,
27056522-27056625,27056724-27056828
Length = 359
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
PG++G G++ C D+DEC + A CP C NT G+Y C G Y+ C
Sbjct: 237 PGFQGDGHK-----CEDLDECKEKLACTCPNCH-CKNTWGNYECKCKGNQIYIRGEDTC 289
Score = 32.3 bits (70), Expect = 0.45
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 107 CPSGYQWNGYTCVDMDEC 160
CP G+Q +G+ C D+DEC
Sbjct: 235 CPPGFQGDGHKCEDLDEC 252
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 35.5 bits (78), Expect = 0.049
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGG 396
PG++G G + C D+DEC + +G C NT GSY C CGG
Sbjct: 572 PGFKGDGIKS----CEDIDECKEKLYCQCKGCSCENTWGSYEC-SCGG 614
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 34.7 bits (76), Expect = 0.085
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 256 GWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDP 435
G++G G + C D+DEC + A + C NT GSY C GG Y+ C
Sbjct: 505 GFKGDGVHK----CEDIDECKERTACQCKECKCKNTWGSYECGCSGGLLYMKEHDTCISK 560
Query: 436 DS 441
++
Sbjct: 561 NA 562
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 34.7 bits (76), Expect = 0.085
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 256 GWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDP 435
G++G G + C D+DEC + A + C NT GSY C GG Y+ C
Sbjct: 505 GFKGDGVHK----CEDIDECKERTACQCKECKCKNTWGSYECGCSGGLLYMKEHDTCISK 560
Query: 436 DS 441
++
Sbjct: 561 NA 562
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 34.7 bits (76), Expect = 0.085
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVN 411
GN ++ C D++EC D A P +C NT GS+ C G Y N
Sbjct: 49 GNPYIKDGCKDINECLD-NATYPCMGICKNTIGSFDCSCYPGSYMKN 94
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 34.7 bits (76), Expect = 0.085
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRAN--CPRGRLCVNTPGSYIC 381
GN + C D++EC D R C C+NTPG + C
Sbjct: 289 GNPYLLDGCQDINECEDSRFKYPCSVPGTCINTPGGFRC 327
>07_03_1693 -
28756331-28756435,28756558-28756664,28757114-28757245,
28757412-28757478,28757553-28757635,28757824-28757905,
28763101-28763177,28763278-28763361,28763443-28763512,
28763625-28763713,28763801-28764487,28765700-28765997
Length = 626
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGG 396
PG++G G + C D+DEC D + C NT GSY C CGG
Sbjct: 501 PGFKGDGIKS----CEDIDECKDKLFCQCKDCSCENTWGSYEC-SCGG 543
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
GN + C DV+EC + + C G C NT GSY C
Sbjct: 361 GNPYIPDGCKDVNEC-ENNSICGAGSTCKNTEGSYRC 396
>12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009
Length = 754
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRAN--------CPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
GN + C D+DEC + + C +G +C NTPGSYIC G T C
Sbjct: 295 GNPYLSDGCQDIDECEMRKLDPKYEELYPCRKG-VCQNTPGSYICKCKKGKKSDGTGYGC 353
Query: 427 FDPDS 441
DS
Sbjct: 354 QPADS 358
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRAN--CPRGRLCVNTPGSYIC 381
GN + C D++EC + R C CVNTPG + C
Sbjct: 272 GNPYLLDGCQDINECDESRFRYPCSVPGTCVNTPGGFTC 310
>10_02_0060 -
4808506-4808535,4808564-4809588,4810125-4810292,
4811202-4811652
Length = 557
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 301 DVDECA-DG-RANCPRGRLCVNTPGSYICVPC 390
D+DECA G +NC +CVN PG + C PC
Sbjct: 151 DIDECALPGIMSNCSFNSVCVNRPGGFDC-PC 181
>09_04_0476 -
17922072-17922469,17922546-17923241,17923405-17923569,
17923670-17924105,17924314-17924739
Length = 706
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
GN ++ C D++EC D P LC NT G Y C
Sbjct: 278 GNPYIKDGCKDINECLD-NTTYPCAGLCQNTMGGYDC 313
>04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029
Length = 677
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICV 384
GN R+ C D+DEC P C+N PG+Y C+
Sbjct: 231 GNPYIRDGCRDIDECQQPDV-YPCHGTCINMPGTYRCL 267
>02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072
Length = 735
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICV 384
GN C D+DEC + C G C NT G Y+C+
Sbjct: 277 GNPYLDGGCQDIDECERDKDAC-FGNKCTNTLGGYLCM 313
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = +1
Query: 271 GNERRREHCVDVDECA---DGRAN-----CPRGRLCVNTPGSYIC 381
GN C D+DEC GR C G +C+NTPGSY C
Sbjct: 610 GNPYLDNGCQDIDECTLRRQGRQYEDVYPCKHG-ICINTPGSYRC 653
>11_08_0023 +
27741775-27742475,27744163-27744413,27744557-27744715,
27744976-27745409,27745537-27746076
Length = 694
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 256 GWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
G+ G + C D+DEC + C G C NT G Y C
Sbjct: 303 GYDGNPYLKGNGGCTDIDECKEPD-RCSTGSRCHNTEGYYYC 343
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +2
Query: 14 SASTCVTLRSPAARERRCMPKSTSPYYECEGCPSGYQWNGYT-----CVDMDECDLIRPC 178
S S CV+ +S C + Y C+ C GY N Y C D+DEC C
Sbjct: 276 SCSVCVSDQSD------CANATNGDGYLCK-CSEGYDGNPYLKGNGGCTDIDECKEPDRC 328
Query: 179 DDLVSCRNEE 208
C N E
Sbjct: 329 STGSRCHNTE 338
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
GN C D++EC + N G C NTPG+++C
Sbjct: 312 GNPYVAGGCQDINECERAKENGCFGE-CTNTPGAFLC 347
>09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784
Length = 773
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 301 DVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVN 411
D+DEC D P +C+NT GSY C G + ++
Sbjct: 338 DIDECQDAH---PCTGICINTQGSYTCTCQRGKHLID 371
>01_03_0307 + 14879564-14879594,14880024-14880182,14880629-14881857
Length = 472
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 283 RREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
RRE DV+EC + C +G C NT G Y C
Sbjct: 7 RRER--DVNECEQNPSPCTKGETCRNTIGWYYC 37
>12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104
Length = 744
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRAN--------CPRGRLCVNTPGSYIC 381
GN C DVDECA + + C +G +C NTPG Y+C
Sbjct: 299 GNPYLLNGCQDVDECALRKQDPKYEDIYPCRKG-VCHNTPGGYLC 342
>10_01_0054 - 773395-774518,776957-777124,777455-778376
Length = 737
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYIC 381
C D+DECA P +C NTPG Y C
Sbjct: 306 CKDIDECAHPN-KYPCHGVCRNTPGDYEC 333
>08_02_1157 +
24765719-24766544,24766569-24766637,24767031-24767180,
24767296-24768503
Length = 750
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGG 396
GN C D++EC G+ C+NT GSY C+ GG
Sbjct: 289 GNPYMPNGCQDINECMLPNPPLCFGK-CINTVGSYECICPGG 329
>07_01_0495 +
3722319-3722517,3723325-3723482,3723652-3723929,
3723946-3724474
Length = 387
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYICV 384
C D++EC + G C+NTPG Y CV
Sbjct: 65 CTDINECLHPKEYGCYGN-CMNTPGGYTCV 93
>04_01_0148 +
1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 65 CMPKSTSPYYECEGCPSGYQWNGYT---CVDMDECDLIRPCDDLVSCRN 202
C+ +ST Y C+ C GY N Y C D+DEC L C+ +C+N
Sbjct: 181 CVHRSTG--YHCK-CSLGYGGNAYIEDGCEDIDECSLPNFCNG--NCQN 224
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPC 390
GN + C D+DEC+ N G C N GSY C C
Sbjct: 198 GNAYIEDGCEDIDECS--LPNFCNGN-CQNFLGSYRCSHC 234
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +2
Query: 11 GSASTCVTLRSPAARERRCMPKSTSPYYECEGCPSGYQWNGYT---CVDMDECDLIRPCD 181
GS S+ + + C+ + Y C C +GY N Y C++++EC+L R
Sbjct: 243 GSCSSATGAPACVSAHSYCVNATNGKGYLCN-CSAGYSGNPYVTGGCININECELRREGP 301
Query: 182 DLVSC 196
+ C
Sbjct: 302 AMYPC 306
>11_02_0042 -
7672565-7672729,7672902-7672977,7673409-7674132,
7674684-7674708,7675041-7675486,7676643-7676862,
7677609-7678459,7678697-7679555
Length = 1121
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 65 CMPKSTSPYYECEG-CPSGY-QWNGYTCVDMDECDLIRP 175
C P STS YY G PS W+G T +DE L +P
Sbjct: 240 CTPVSTSSYYRYRGRNPSTVGSWDGTTAASLDEDGLNQP 278
>04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313
Length = 739
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 GWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC-VPCG 393
G+ G C D+DEC D + + G C N PG + C P G
Sbjct: 286 GYEGNPYLEGPNGCRDIDECQDSKTHHCYGE-CRNKPGGFDCNCPAG 331
>02_05_1158 -
34550049-34551241,34551354-34551521,34551847-34552231,
34552245-34552772
Length = 757
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICV 384
GN C D+DEC D G C NT G Y C+
Sbjct: 295 GNPYLDSGCTDIDECQDKEKYGCYGD-CTNTIGGYTCL 331
>01_01_0707 - 5453933-5454619
Length = 228
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 348 PSPWTVGSSVSALVHIHAMFPSSLIASAPPARLPVNPGGHGPQVKP--PSSLRHETRSSQ 175
P ++++A++H H SS S+PPA P P H P+ +P P S R + + Q
Sbjct: 116 PRDVQAAAALAAVMHHHKHPSSSTSTSSPPAAPP--PDEHHPRHEPQQPESSREDDQQQQ 173
>09_04_0475 -
17913982-17914772,17914830-17915156,17915323-17915493,
17915583-17915824,17915862-17916049,17916184-17916253,
17916329-17916612
Length = 690
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYIC 381
C D++EC D P +C NT GSY C
Sbjct: 260 CRDINECLDN-TTYPCAGICENTIGSYKC 287
>08_02_1286 - 25882773-25883771
Length = 332
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = -2
Query: 528 SNRYYKRLLSETTDGVESSAVAGVASLHQRVGVEARP-----RRVHVVVTAAGYADV*TR 364
S+R + LL T ++AVAGV GVE+ P R + V +GY++
Sbjct: 3 SHRRLRLLLLAATLAAAAAAVAGVEEEEAFCGVESMPDAATLRPDRLTVLLSGYSERRLP 62
Query: 363 GIDAKPSPWTVGSSVSALVHI--HAMFPSSLIASAPPA 256
+ A + V A+V + + P SL++S PPA
Sbjct: 63 LLRAIAGAYAAHPLVLAVVVLWSNPSTPDSLLSSFPPA 100
>08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544
Length = 447
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYIC 381
C D++EC + + P +C NT GSY C
Sbjct: 366 CTDINEC-EHKDEYPCYGVCTNTAGSYAC 393
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 285 SSLIASAPPARLPVNPGGHGPQVKPPSSLRHETRSSQGRIKSHSSIS 145
SSL+ ++ P RL + G + PP+S RH SS +++ S+ S
Sbjct: 9 SSLLLTSSPLRLRPSAGAFALFLSPPASRRHLLLSSPAPLRTLSTAS 55
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
GN C D++EC + + G C NTPG+++C
Sbjct: 323 GNPYVAGGCQDINECERPKEHGCFGE-CTNTPGAFLC 358
>05_01_0242 + 1804183-1806096
Length = 637
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3
Query: 302 STQCSLRLSLPVPRQPGYL*TLEDTAHR 219
ST+C LRL LP+PR+ +L T T+HR
Sbjct: 3 STKCRLRLLLPLPRR--HLSTAPATSHR 28
>03_03_0091 - 14371528-14372661
Length = 377
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 357 DAKPSPWTVGSSVSALVHIHAMFPSSLIASA 265
DA P + G++V+A H+H + P+S ASA
Sbjct: 266 DALPHFFPQGAAVTATAHVHGVDPASAAASA 296
>12_01_0377 -
2939384-2939505,2939629-2939695,2940324-2940543,
2940655-2940731,2940813-2940878,2940970-2941018,
2941131-2941181,2941262-2941314,2941432-2941486,
2941563-2941651,2941742-2941827,2941933-2941989,
2942086-2942275,2943847-2944005
Length = 446
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 310 ECADGRANCPRGRLCVNTPGSYICVPCGGHYY 405
+ A G+ +CP+ LC ++PG+ + P GG Y
Sbjct: 101 KAAKGQKSCPQTPLCASSPGNPV-TPVGGCRY 131
>05_05_0036 -
21758409-21758531,21758891-21759206,21759964-21761121,
21761236-21761333
Length = 564
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = -2
Query: 615 SCSEAHYKAAARPDVRLDLCPVRTLCRCQSNRYYKRLLSETTDGVES 475
SC++ YKAA RP LCPVR C + KRLL ++ V S
Sbjct: 397 SCNKMRYKAAYRPSEL--LCPVRFEWVCYDSA--KRLLDKSLYSVLS 439
>03_02_0359 -
7788382-7788522,7788931-7789837,7791227-7791337,
7791437-7791507,7791582-7791659,7792564-7792770,
7792867-7793046,7793249-7793471,7794133-7794453,
7794538-7795109
Length = 936
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 237 GGHGPQVKPPSSLRHETRSSQGRIKSHSSISTHVYPFHW*PLGH 106
G V PP + R E + R++SH ST FH P+ H
Sbjct: 729 GWDSDMVPPPRADRDEWNFNHERVRSHMDASTSSNLFHHAPVEH 772
>12_02_1103 + 26116614-26117607,26118060-26118242,26118344-26119518
Length = 783
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRAN--------CPRGRLCVNTPGSYICVPCG 393
GN + C D+DEC + + C G +C N PG+Y+C CG
Sbjct: 322 GNPYLPKGCQDIDECKLRKEDPKYKELYPCRHG-MCQNIPGNYLC-KCG 368
>11_08_0019 +
27697918-27698609,27701107-27701372,27701778-27701948,
27702187-27703166,27703723-27703804,27704148-27704170
Length = 737
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +1
Query: 271 GNERRREHCVDVDEC--ADGRAN-CPRGRLCVNTPGSYIC 381
GN E C+D++EC + + N CP G C N G Y C
Sbjct: 310 GNPYLPEGCIDINECDPSTYKENPCP-GGTCHNLEGGYKC 348
>10_08_0514 +
18465474-18465760,18465888-18465978,18466670-18466767,
18466852-18466949,18468192-18468321,18468410-18468597,
18470291-18470323,18470627-18471000,18471116-18471294,
18471421-18471532,18471655-18471771,18471875-18472189,
18472405-18472743
Length = 786
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 82 GAFGHTASLSSRRASERHTRAGTADR 5
G T+S SS RA++RH AG ADR
Sbjct: 366 GELPSTSSSSSSRATKRHRVAGMADR 391
>07_01_0639 -
4785446-4786186,4786429-4786656,4786727-4786872,
4786986-4787186,4787256-4787432,4787741-4788359
Length = 703
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -3
Query: 206 LRYDTRPDHHRAESNRIRPYPRT----CTHSTGSRWDILHTRNKG 84
LR P H AE + T C H GSRWD+L+ R G
Sbjct: 312 LRLLALPSLHEAEEVEVAKARATLHSQCGHRRGSRWDLLNLRWPG 356
>07_01_0286 + 2086630-2086856,2087052-2087067
Length = 80
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1
Query: 337 DSWLVRQRTRPHPRNVPFVSHCQCPASPATCEPWRTRPTGEAAFFV 200
D WL R R PR F C P P+ T T +F V
Sbjct: 35 DIWLRRDRLTGLPRRFAFAGSCTPPTPPSPSPTITTSSTARRSFTV 80
>06_01_1133 +
9364842-9364850,9364929-9365048,9365157-9365476,
9366267-9366428,9367151-9367235,9367352-9367501,
9367588-9367635,9367705-9367773,9367897-9368600,
9369426-9369561,9369636-9369856,9370355-9370486,
9371316-9371406,9371878-9371925,9372004-9372132,
9372357-9372626
Length = 897
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/69 (27%), Positives = 26/69 (37%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDPDSLVKRCDPSYCR 474
C+ C + CP+ +C N + C + PCF D + CDP CR
Sbjct: 663 CLTNGTCCEKYCGCPK--MCKNR---FRGCHCAKSQCRSRQCPCFAAD---RECDPDVCR 714
Query: 475 RFNAVCGFG 501
CG G
Sbjct: 715 NCWVGCGDG 723
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = -3
Query: 599 ITRQLLVRMSV*ISVQSAHCAVASPTGITNDFCPKPQTALNRLQ*LGSHRFTSESGSK 426
I +QLL M V IS+ V++ +D C + T+L+ + ++ +S+S SK
Sbjct: 465 IVQQLLTSMGVGISMHLLEAIVSNSVADLDDSCGQDMTSLSTKPTIATNESSSKSYSK 522
>05_03_0170 - 9132207-9133010,9133232-9133894
Length = 488
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 38 RSPAARERRCM----PKSTSPYYECEGCPSGYQWNGYTCVDMDECDLIRPCDDLVSCR 199
R P RRC+ PKST+ + S W G CVD D+C ++R D + R
Sbjct: 210 RGPPRPLRRCIQGLDPKSTADLF------SSAAWVGERCVDGDDCFVLRVDADHAALR 261
>04_03_0588 +
17595299-17596151,17597519-17597665,17598562-17598837,
17599108-17599805
Length = 657
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 256 GWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
G++G + + C D++EC D + G+ C+N G + C G + PC
Sbjct: 270 GFQGNPYNKGLDSCQDINECDDPKKYPCYGK-CINKLGGFDCFCPAGMRGNASVGPC 325
>04_03_0184 +
12395349-12395542,12396821-12397467,12398119-12398655,
12399087-12399239,12399315-12399809,12400032-12400555
Length = 849
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPC 390
GN C DVDEC +G +C N GSY C+ C
Sbjct: 450 GNPYDANGCEDVDECKK-TPGIFKG-ICHNNIGSYQCMEC 487
>03_02_0580 + 9615646-9616647
Length = 333
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Frame = -2
Query: 318 SALVHIHAMFPSSL-IASAPPARLPVN--------PGGHGPQVKPPSSLRHETR 184
S VH+H + + ++S+PPA V+ PGG+ Q KPP+ + + R
Sbjct: 138 STNVHLHLLVEDEIRMSSSPPALPAVDQKEKTWFPPGGYNEQCKPPARITYADR 191
>02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263
Length = 769
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYIC 381
GN C D+DEC + G+ C NT GSY C
Sbjct: 310 GNPYLDGGCKDIDECQRTKEYPCFGK-CTNTIGSYTC 345
>11_08_0003 +
27492503-27492812,27492863-27493148,27495399-27495652,
27496645-27496830,27497042-27498117
Length = 703
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = +2
Query: 65 CMPKSTSPYYECEGCPSGYQWNGYT-----CVDMDECDL 166
C ++ Y C+ C GY N Y C+D+DEC L
Sbjct: 253 CNNRNNGEGYICK-CSEGYDGNPYLKGNGGCIDIDECHL 290
>05_06_0057 +
25253497-25253589,25253722-25253799,25254583-25254621,
25254724-25255263,25255352-25255450,25255614-25255691,
25255961-25256146,25256240-25256365
Length = 412
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/74 (31%), Positives = 27/74 (36%)
Frame = -2
Query: 336 TVGSSVSALVHIHAMFPSSLIASAPPARLPVNPGGHGPQVKPPSSLRHETRSSQGRIKSH 157
T SSV V H+ FP + S+ P P GP P SSL S+
Sbjct: 85 TPSSSVKPTVQDHSSFPQPQLPSSQQNIQPSGPFSSGPS-NPASSLDLPAMSA----NPQ 139
Query: 156 SSISTHVYPFHW*P 115
S YP H P
Sbjct: 140 QSAQAKGYPIHQMP 153
>05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213
Length = 491
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -2
Query: 270 SAPPARLPVNPGGHGPQVKPPSSLRHETRSSQGRIKSHSSISTHVYPFHW*PLG 109
S+PPARL VNP H R+ S HVYP W P G
Sbjct: 292 SSPPARLRVNPNADVALAGADFVRNH-------RVLGVDFASVHVYPDTWLPAG 338
>04_04_0176 - 23329589-23331043
Length = 484
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -2
Query: 270 SAPPARLPVNPGGHG--PQVKPPSSLRHETRSSQGRIKSHSSISTHVYPFHW*PLGHP 103
S PP LP+ GG G P V P + R R GR H ST PLG P
Sbjct: 200 SCPPTLLPLGGGGGGDDPHVHAPRAARGRGR---GRGGGHGGNSTTARGNVGPPLGDP 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,649,673
Number of Sequences: 37544
Number of extensions: 546388
Number of successful extensions: 2152
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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