Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30389
(790 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16110.1 68414.m01931 wall-associated kinase, putative contai... 46 3e-05
At1g21240.1 68414.m02654 wall-associated kinase, putative simila... 45 7e-05
At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identic... 39 0.003
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 39 0.004
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 39 0.004
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 38 0.008
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 38 0.008
At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 38 0.008
At1g22720.1 68414.m02839 wall-associated kinase, putative contai... 38 0.010
At1g16160.1 68414.m01936 protein kinase family protein contains ... 38 0.010
At1g16120.1 68414.m01932 wall-associated kinase, putative contai... 37 0.013
At4g31100.1 68417.m04414 wall-associated kinase, putative 36 0.031
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 36 0.031
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 36 0.031
At1g16130.1 68414.m01933 wall-associated kinase, putative simila... 36 0.031
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 36 0.040
At1g16150.1 68414.m01935 wall-associated kinase, putative contai... 35 0.054
At1g16260.1 68414.m01947 protein kinase family protein contains ... 35 0.071
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 34 0.12
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 33 0.16
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 33 0.29
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 32 0.38
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 32 0.38
At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identic... 31 0.66
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 30 2.0
At1g17910.1 68414.m02217 wall-associated kinase, putative contai... 30 2.0
At1g49840.1 68414.m05588 expressed protein contains Pfam profile... 29 3.5
At4g01350.1 68417.m00175 DC1 domain-containing protein contains ... 29 4.6
At2g20100.1 68415.m02348 ethylene-responsive family protein simi... 28 6.1
At1g02580.1 68414.m00209 maternal embryogenesis control protein ... 28 6.1
At4g14365.1 68417.m02213 zinc finger (C3HC4-type RING finger) fa... 28 8.1
At3g47850.1 68416.m05216 expressed protein 28 8.1
At2g21385.1 68415.m02545 expressed protein 28 8.1
>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
similarity to wall-associated kinase 2 GI:4826399 from
[Arabidopsis thaliana]
Length = 642
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 268 TGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVP 387
TGN R C+D+DEC +G NC G CVN PG++ C P
Sbjct: 311 TGNPYLRHGCIDIDEC-EGHHNCGEG-TCVNMPGTHSCEP 348
>At1g21240.1 68414.m02654 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 741
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDPD 438
GN R E C D+DEC NC + C N G + C C Y +N++ C P+
Sbjct: 283 GNPYRSEGCKDIDECISDTHNCSDPKTCRNRDGGFDC-KCPSGYDLNSSMSCTRPE 337
>At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identical
to wall-associated kinase 2 [Arabidopsis thaliana]
GI:4826399; induced by salicylic acid or INA
(PMID:10380805)
Length = 732
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDPDSLVK 450
GN C D++EC R NC C NT GS+ C C Y ++ C +
Sbjct: 268 GNPYLPNGCQDINECISSRHNCSEHSTCENTKGSFNC-NCPSGYRKDSLNSC------TR 320
Query: 451 RCDPSYCRRFNAVCGFGQKSFVIPVGLATAQ 543
+ P Y R G VI +G++ Q
Sbjct: 321 KVRPEYFRWTQIFLGTTIGFSVIMLGISCLQ 351
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRL-CVNTPGSYIC 381
GN C+D+DEC +G+ G L CVN PGS+ C
Sbjct: 262 GNPYLPGGCIDIDECEEGKGLSSCGELTCVNVPGSWRC 299
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRL-CVNTPGSYIC 381
GN C+D+DEC +G+ G L CVN PGS+ C
Sbjct: 299 GNPYLPGGCIDIDECEEGKGLSSCGELTCVNVPGSWRC 336
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
PG++G G ++ C D++EC + +A CP C NT GSY C G Y+ C
Sbjct: 505 PGFKGDGTKK----CEDINECKEKKACQCPECS-CKNTWGSYECSCSGDLLYIRDHDTC 558
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
PG++G G ++ C D++EC + +A CP C NT GSY C G Y+ C
Sbjct: 505 PGFKGDGTKK----CEDINECKEKKACQCPECS-CKNTWGSYECSCSGDLLYIRDHDTC 558
>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 733
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFD 432
GN + C D++EC NC C NT GS+ C G TT C D
Sbjct: 269 GNPYLSDGCQDINECTTRIHNCSDTSTCENTLGSFHCQCPSGSDLNTTTMSCID 322
>At1g22720.1 68414.m02839 wall-associated kinase, putative contains
similarity to serine/threonine kinase gb|Y12531 from
Brassica oleracea
Length = 219
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 268 TGNERRREHCVDVDEC---ADGRAN-CPRGRLCVNTPGSYIC 381
TGN C D+DEC A+GR N C G C N+P SY C
Sbjct: 10 TGNPYVLNGCKDIDECKELANGRPNICTDGGTCQNSPESYRC 51
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1
Query: 268 TGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVP 387
TGN R C+D D+C G C G CVN PG Y C P
Sbjct: 287 TGNPYLRGGCIDNDDCK-GPNICEEGT-CVNVPGGYRCDP 324
>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 730
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 268 TGNERRREHCVDVDECADGRANCPRGRLCVNTPGSY-ICVP 387
TGN R CVD D C +G NC CVN PG +C P
Sbjct: 304 TGNPYLRGGCVDTDSC-EGNHNCGEDAHCVNMPGPMSMCRP 343
>At4g31100.1 68417.m04414 wall-associated kinase, putative
Length = 786
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICV 384
GN + C D+DEC + C CVN G Y CV
Sbjct: 326 GNPYDSDGCRDIDECKENPKYCKETDTCVNFEGGYRCV 363
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
PG++G G ++ C D++EC + +A CP C NT GSY C G Y+ C
Sbjct: 505 PGFKGDGVKK----CEDINECKEKKACQCPECS-CKNTWGSYECSCSGDLLYMRDHDTC 558
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
PG++G G ++ C D++EC + +A CP C NT GSY C G Y+ C
Sbjct: 505 PGFKGDGVKK----CEDINECKEKKACQCPECS-CKNTWGSYECSCSGDLLYMRDHDTC 558
>At1g16130.1 68414.m01933 wall-associated kinase, putative similar
to putative serine/threonine-specific protein kinase
GI:7270012 from [Arabidopsis thaliana]
Length = 748
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECA--DGRANCPRGRLCVNTPGSYICVP 387
PG++G N CVDVDEC GR C + + CVN PG + C P
Sbjct: 290 PGYKG--NPFLPGGCVDVDECKLDIGRNQC-KDQSCVNLPGWFDCQP 333
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFD 432
PG+ G G + C DV+EC + A R C NT GSY C G Y+ C +
Sbjct: 504 PGFIGDG----LKECKDVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICIN 559
Query: 433 PDS 441
D+
Sbjct: 560 RDA 562
>At1g16150.1 68414.m01935 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 779
Score = 35.1 bits (77), Expect = 0.054
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 295 CVDVDECA--DGRANCPRGRLCVNTPGSYICVP 387
CVD+DEC GR C + + CVN PG + C P
Sbjct: 310 CVDIDECKLEIGRKRC-KDQSCVNKPGWFTCEP 341
>At1g16260.1 68414.m01947 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 34.7 bits (76), Expect = 0.071
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYIC 381
C D+DEC D N R CVN GSY C
Sbjct: 282 CQDIDECRDPHLNKCGKRKCVNVLGSYRC 310
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 289 EHCVDVDECADGRA-NCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
++C DVDEC + CP + C NT GSY C G Y+ C
Sbjct: 508 KNCEDVDECKEKTVCQCPECK-CKNTWGSYECSCSNGLLYMREHDTC 553
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVP 387
GN R C+D+DEC + C CVN G Y CVP
Sbjct: 280 GNPYIRGGCIDIDEC-EVPNKCGED-TCVNMAGRYSCVP 316
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 77 STSPYYECEGCPSGYQWNGYT---CVDMDECDLIRPCDD 184
S Y C C SGY+ N Y C+D+DEC++ C +
Sbjct: 265 SRMSYRSCY-CGSGYRGNPYIRGGCIDIDECEVPNKCGE 302
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 107 CPSGYQWNGYTCVDMDECDLIRPCD-DLVSCRNE 205
CP G++ +G C D+DEC C D +C+N+
Sbjct: 500 CPPGFKGDGLKCEDIDECKEQSACQCDGCNCKNK 533
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 253 PGWRGTGNERRREHCVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFD 432
PG++G G + C D+DEC + A G C N G + C G Y+ C +
Sbjct: 502 PGFKGDGLK-----CEDIDECKEQSACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIE 556
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 295 CVDVDECADGRANCP-RGRLCVNTPGSYICVPCGGHYYVNTTRPCFD 432
C D++EC + R+ C G C N+ G Y C G Y+N C +
Sbjct: 512 CEDINECKE-RSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIE 557
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 107 CPSGYQWNGYTCVDMDEC 160
CP G+Q +G TC D++EC
Sbjct: 501 CPEGFQGDGLTCEDINEC 518
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +1
Query: 271 GNERRREHCVDVDECADG----RANCPRGRLCVNTPGSYICV 384
GN C D++EC R NC CVN PG++ C+
Sbjct: 329 GNPYLPGGCKDINECLRNSYGQRQNCRESDTCVNLPGTFNCI 370
>At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identical
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
pathogen infection (PMID:10380805)
Length = 735
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +1
Query: 271 GNERRREHCVDVDECADG----RANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPC 426
GN C DV+EC R NC + C N G + C G+ TT C
Sbjct: 272 GNPYLSAGCQDVNECTTSSTIHRHNCSDPKTCRNKVGGFYCKCQSGYRLDTTTMSC 327
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 107 CPSGYQWNGYTCVDMDECDLIRPCD-DLVSCRN 202
CP G+ +G C D+DEC C D C+N
Sbjct: 499 CPLGFLGDGLKCEDIDECKEKSACKCDGCKCKN 531
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFD 432
C D+DEC + A G C N G Y C Y+ C +
Sbjct: 510 CEDIDECKEKSACKCDGCKCKNNWGGYECKCSNNSIYMKEEDTCIE 555
>At1g17910.1 68414.m02217 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 764
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = +1
Query: 271 GNERRREHCVDVDECADGRANCPRGRL-----CVNTPGSYICV 384
GN + C D++EC + + C R+ C+NT G + C+
Sbjct: 331 GNPYVSDDCQDINECTEYKNPCGDTRILYRNTCINTSGGHRCI 373
>At1g49840.1 68414.m05588 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 494
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 384 TLRRSLLREHDEAVLRPRLAGEAMRPQLLQTIQRRLWFRTKVVCNTGWTGNGTVCGLDR 560
+LR ++R + RPR + ++ LW R K++ ++G +G G V G +R
Sbjct: 10 SLRDEVVRGLSPSRSRPRSRSASPSRSTTPHMKALLWGRKKLIASSGCSGGGGVIGGER 68
>At4g01350.1 68417.m00175 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 17 ASTCVTLRSPAARERRCMPKSTSPYYECEGCP-SGYQWNGYTC 142
A+T V L E P + EC+GC +GY +NGY C
Sbjct: 2 ATTAVNL---PIHEHPLYPSARCIIGECDGCHVNGYMYNGYFC 41
>At2g20100.1 68415.m02348 ethylene-responsive family protein similar
to Ethylene-regulated ER33 protein (GI:5669656)
[Lycopersicon esculentum]; PMID: 12679534; putative
bHLH133 transcription factor
Length = 362
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 501 SETTDGVESSAVAG-VASLHQRVGVEARPRRVHVVVTAAGYADV*TRGIDAKPSPWTVGS 325
S++T V + G +ASLHQ V + V+ A GY I+A P+
Sbjct: 214 SQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTP 273
Query: 324 SVSALVHIHAMFPSSLIASAPPARL 250
S + ++H HA + I P +L
Sbjct: 274 SRNNMMHQHAQRNMNGIFPEDPGQL 298
>At1g02580.1 68414.m00209 maternal embryogenesis control protein /
MEDEA (MEA) nearly identical to MEDEA GB:AAC39446
GI:3089625 from [Arabidopsis thaliana]; contains Pfam
profile PF00856: SET domain
Length = 689
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = +1
Query: 295 CVDVDECADGRANCPRGRLCVNTPGSYICVPCGGHYYVNTTRPCFDPDSLVKRCDPSYCR 474
C+ + C + C + C N G C C N PCF + + CDP CR
Sbjct: 462 CLTHENCCEKYCGCSKD--CNNRFGG--C-NCAIGQCTNRQCPCFAAN---RECDPDLCR 513
Query: 475 RFNAVCGFG 501
CG G
Sbjct: 514 SCPLSCGDG 522
>At4g14365.1 68417.m02213 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 376
Score = 27.9 bits (59), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 349 LCVNTPGSYICVPCG 393
+CV+ P +CVPCG
Sbjct: 327 ICVDAPSEAVCVPCG 341
>At3g47850.1 68416.m05216 expressed protein
Length = 322
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 198 VTKKAASPVGRVLQGSQVAGLAGHWQ*ETKGTLRGCGRVR*RTSQLSKGTALRQY 362
V+ + VG ++G + A H +T+ LR CG S L + AL Q+
Sbjct: 211 VSNDSGGNVGTHMEGGETDDAANHNNAQTRTLLRLCGASSSSESPLRRAAALSQH 265
>At2g21385.1 68415.m02545 expressed protein
Length = 330
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 549 RTLCRCQSNRYYKRLLSETTDGVESSA 469
RTL R + Y +R+L+E G+ES A
Sbjct: 295 RTLIRTEGGSYQQRILTEYLKGIESRA 321
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,983,296
Number of Sequences: 28952
Number of extensions: 385108
Number of successful extensions: 1330
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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