Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30388
(851 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 139 7e-32
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 136 5e-31
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 133 6e-30
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 118 1e-25
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 105 1e-21
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 105 2e-21
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 99 7e-20
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 97 5e-19
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 89 1e-16
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 89 1e-16
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 85 2e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 8e-14
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 75 3e-12
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 74 4e-12
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 69 2e-10
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 60 7e-08
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 52 2e-05
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 48 3e-04
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 48 4e-04
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 46 0.001
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 45 0.003
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 45 0.003
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 44 0.004
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 44 0.005
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 44 0.005
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 42 0.015
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 42 0.015
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 42 0.026
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 41 0.046
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 41 0.046
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 41 0.046
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 40 0.060
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 40 0.11
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 39 0.18
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 38 0.24
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 38 0.32
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 36 1.7
UniRef50_UPI0000E11517 Cluster: hypothetical protein OM2255_1381... 35 2.3
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 35 3.0
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 35 3.0
UniRef50_Q01QY5 Cluster: Metallophosphoesterase precursor; n=1; ... 34 4.0
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 34 4.0
UniRef50_Q4SFG0 Cluster: Chromosome 1 SCAF14603, whole genome sh... 34 5.2
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 33 6.9
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 33 9.1
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 139 bits (337), Expect = 7e-32
Identities = 72/112 (64%), Positives = 86/112 (76%), Gaps = 2/112 (1%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q
Sbjct: 60 GFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQ 119
Query: 689 ENSWID*WKCTPPSR--SQTCFQNP*AFNLSKEDDVRRYVVKRVLPAKEGKE 838
+ + T P R + + FNLSKEDDVR+YV++R LP KEGK+
Sbjct: 120 DIPGLT--DNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGKK 169
Score = 125 bits (301), Expect = 2e-27
Identities = 70/151 (46%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQ
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 513 SR*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWL-LLLCARVPR 689
+ T V H R E + V + S L L++ + +
Sbjct: 61 FP-MKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQ 119
Query: 690 KIPGLTDGNVPRRLGPKRASKIRKRSTLAKK 782
IPGLTD +PRRLGPKR KIRK L+K+
Sbjct: 120 DIPGLTDNTIPRRLGPKRVGKIRKMFNLSKE 150
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 136 bits (330), Expect = 5e-31
Identities = 67/110 (60%), Positives = 81/110 (73%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG +
Sbjct: 60 GFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEK 119
Query: 689 ENSWID*WKCTPPSRSQTCFQNP*AFNLSKEDDVRRYVVKRVLPAKEGKE 838
+ + + +NL+KEDDVR+YVVKR LP K+GK+
Sbjct: 120 DIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGKK 169
Score = 134 bits (324), Expect = 3e-30
Identities = 77/151 (50%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQ
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 513 SR*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRK 692
+ T V + H R E + V + + S L L+ + K
Sbjct: 61 FP-MKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEK 119
Query: 693 -IPGLTDGNVPRRLGPKRASKIRKRSTLAKK 782
IPGLTD V RRLGPKRAS IRK L K+
Sbjct: 120 DIPGLTDTTVLRRLGPKRASNIRKLYNLTKE 150
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 133 bits (321), Expect = 6e-30
Identities = 73/112 (65%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG +
Sbjct: 60 GFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEK 119
Query: 689 ENSWID*WKCTPPSR--SQTCFQNP*AFNLSKEDDVRRYVVKRVLPAKEGKE 838
+ + T P R + + FNLSKEDDVR+YVV++ L KEGK+
Sbjct: 120 DIPGLT--DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGKK 168
Score = 132 bits (320), Expect = 8e-30
Identities = 76/151 (50%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQ
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 513 SR*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWL-LLLCARVPR 689
+ T V H R E + V + + S L L++ + +
Sbjct: 61 FP-MKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEK 119
Query: 690 KIPGLTDGNVPRRLGPKRASKIRKRSTLAKK 782
IPGLTD VPRRLGPKRAS+IRK L+K+
Sbjct: 120 DIPGLTDTTVPRRLGPKRASRIRKLFNLSKE 150
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 118 bits (285), Expect = 1e-25
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 509
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 679
GFPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 60 GFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 115
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 105 bits (253), Expect = 1e-21
Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQ
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 513 SR*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFV-DVLLTPISRSWLLLLCARVPR 689
R V R H R + E + + ++ R L + +
Sbjct: 61 FP-MRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGAN 119
Query: 690 KIPGLTDGNVPRRLGPKRASKIRK 761
+I GLTD NVPRRLGPKR +K+R+
Sbjct: 120 EIAGLTDQNVPRRLGPKRLTKLRR 143
Score = 93.5 bits (222), Expect = 6e-18
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPM+QGVL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA
Sbjct: 60 GFPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGAN 119
Query: 689 ENSWID*WKCTPPSRSQTCFQNP*AFNLSKEDD---VRRYVVKRVLPAKEGKENAK 847
E + + + + F K D V++ +++R K+GK+ K
Sbjct: 120 EIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQK 175
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 105 bits (251), Expect = 2e-21
Identities = 55/109 (50%), Positives = 69/109 (63%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG
Sbjct: 101 GFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTN 160
Query: 689 ENSWID*WKCTPPSRSQTCFQNP*AFNLSKEDDVRRYVVKRVLPAKEGK 835
E + + + FNL K DDVR+YV+ R + +K GK
Sbjct: 161 EIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-SKNGK 208
Score = 84.2 bits (199), Expect = 4e-15
Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQ
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 513 SR*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWL-LLLCARVPR 689
+ T V + R + E + V + S L L L +
Sbjct: 102 FPMMQGV-LTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTN 160
Query: 690 KIPGLTDGNVPRRLGPKRASKIRKRSTLAK 779
+IPGLTD V ++LGPKRA+KIRK L K
Sbjct: 161 EIPGLTDKAVGKKLGPKRATKIRKLFNLDK 190
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 99 bits (238), Expect = 7e-20
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 513 SR*NR-AS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCARVPR 689
+ + V + + + T R + R+ ++ P R L + +
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKR-KSVRGCIVGPDMRVLALQIVKKGVA 119
Query: 690 KIPGLTDGNVPRRLGPKRASKIRKRSTLAKK 782
+I GLT +PR+LGPKRA+ I+K L K+
Sbjct: 120 EIDGLTTVTLPRKLGPKRANNIKKLFGLKKE 150
Score = 96.7 bits (230), Expect = 7e-19
Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG
Sbjct: 60 GFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVA 119
Query: 689 ENSWID*WKCTPPSRSQTCFQNP*AFNLSKEDD---VRRYVVKRVLPAKEGKENAK 847
E + + F L KEDD +++ V++R +GK+ K
Sbjct: 120 EIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTK 175
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 97.1 bits (231), Expect = 5e-19
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 509
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQ
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQ 59
Score = 42.7 bits (96), Expect = 0.011
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 687 RKIPGLTDGNVPRRLGPKRASKIRKRSTLAKK 782
+ IPGLTD PR +GPKRAS+IRK L+K+
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKE 111
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 89.4 bits (212), Expect = 1e-16
Identities = 38/61 (62%), Positives = 49/61 (80%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +
Sbjct: 60 GFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEK 119
Query: 689 E 691
E
Sbjct: 120 E 120
Score = 73.3 bits (172), Expect = 7e-12
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQD 512
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQ
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 513 SR*NR-AS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCARVPR 689
+ + + A+ R ER+ ++ IS ++L + +
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVL-QKGEK 119
Query: 690 KIPGLTDGNVPRRLGPKRASKIR 758
+I GLT VPRR GPKRAS +R
Sbjct: 120 EIDGLTTTAVPRRFGPKRASTLR 142
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/101 (43%), Positives = 65/101 (64%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPM GV TN+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG
Sbjct: 59 GFPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEG 118
Query: 689 ENSWID*WKCTPPSRSQTCFQNP*AFNLSKEDDVRRYVVKR 811
E + + Q FNLS++DDV+++V++R
Sbjct: 119 EIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
Score = 74.9 bits (176), Expect = 2e-12
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = +3
Query: 336 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQDS 515
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK D
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDK-DG 59
Query: 516 R*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWL-LLLCARVPRK 692
T V + + E + V + S L ++ + +
Sbjct: 60 FPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGE 119
Query: 693 IPGLTDGNVPRRLGPKRASKIRKRSTLAKK 782
I G+T+ +P R GP+RAS RK L++K
Sbjct: 120 IEGVTNDALPMRAGPQRASHFRKLFNLSQK 149
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 85.4 bits (202), Expect = 2e-15
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +2
Query: 497 QRQAGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 676
QR G KQGVL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+
Sbjct: 61 QRFTGGNDKQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVK 120
Query: 677 KGAQE 691
KGA E
Sbjct: 121 KGANE 125
Score = 40.7 bits (91), Expect = 0.046
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 690 KIPGLTDGNVPRRLGPKRASKIRK 761
+I GLTD NVPRRLGPKR +K+R+
Sbjct: 125 EIAGLTDQNVPRRLGPKRLTKLRR 148
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 8e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 470
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 682
GFPM QGVL + R RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G
Sbjct: 66 GFPMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAG 123
Score = 66.5 bits (155), Expect = 8e-10
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Frame = +3
Query: 336 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQDS 515
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND Q
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 516 R*NRAS*QT-AVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRK 692
+ ++ + Q A R ER+ ++ P + ++L +
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKCYLHRRNGERKR-KSIRGCIVGPDLHALSVVLVDAGDKT 126
Query: 693 IPGLTDGNVPRRLGPKRASKIRK 761
+PGLTD VP+RL PKRASKIR+
Sbjct: 127 LPGLTDVVVPKRLVPKRASKIRR 149
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 74.1 bits (174), Expect = 4e-12
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 509
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 510 D---SR*NRAS*QTAVFVF*CQRATHVTDRAAMERENVNQFVDVLLTPISRSWLLLLCAR 680
AS + ++ V + ER N VL + I + + + ++
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDI--ALVNVTISK 118
Query: 681 V-PRKIPGLTDGNVPRRLGPKRASKIRKRSTLAK 779
V + I G+TD PRRLGPKRASKIRK L++
Sbjct: 119 VGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Score = 68.1 bits (159), Expect = 3e-10
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKG 682
GFPM GVL +SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 683 AQENSWID*WKCTPPSR--SQTCFQNP*AFNLSKEDDVRRYVVKRVLPAKEGKEN 841
Q + T P R + + FNLS+ +DVR+YVV+R + K GK++
Sbjct: 121 DQPIEGVT--DTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGKKD 172
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 68.9 bits (161), Expect = 2e-10
Identities = 35/61 (57%), Positives = 42/61 (68%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPM G LT RVR L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +
Sbjct: 45 GFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEK 104
Query: 689 E 691
E
Sbjct: 105 E 105
Score = 37.9 bits (84), Expect = 0.32
Identities = 14/45 (31%), Positives = 32/45 (71%)
Frame = +3
Query: 375 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 509
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D Q
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQ 44
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 60.1 bits (139), Expect = 7e-08
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +2
Query: 497 QRQAGFPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVI 670
Q + GFPMK+G+L+ SRV++L+ KG + R + GER RKSVRGCIV +SVL + +
Sbjct: 56 QDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKL 115
Query: 671 V 673
+
Sbjct: 116 L 116
Score = 58.8 bits (136), Expect = 2e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +3
Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 509
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQ
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQ 59
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -2
Query: 247 QESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXLT--VPLLGGKVHG 74
+ + Q+K + + ED LS G P L+ V ++GGKVHG
Sbjct: 18 ETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPELATLSLAVRVVGGKVHG 77
Query: 73 SLARAGKVKGQTPKVE 26
SLARAGKV+GQTPKVE
Sbjct: 78 SLARAGKVRGQTPKVE 93
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -2
Query: 97 LLGGKVHGSLARAGKVKGQTPKVE 26
LLGGKVHGSLARAGKV+ QTPKV+
Sbjct: 68 LLGGKVHGSLARAGKVRAQTPKVD 91
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 47.6 bits (108), Expect = 4e-04
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -2
Query: 250 GQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXLTVP---LLGGKV 80
GQE + QIK + +L +D L L G P +LGGKV
Sbjct: 17 GQEMVAQIKAHVASLEG---KDQVLLLAGTPLEDEVTLGQCEVEALSTLEVVGRMLGGKV 73
Query: 79 HGSLARAGKVKGQTPKVE 26
HGSL AGKV+GQTPKV+
Sbjct: 74 HGSLDCAGKVRGQTPKVD 91
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 682
GFPM+ + +R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 60 GFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 673
GFPM+ V RV++L+S+G +RPR GER++K+V G + N+ + + IV
Sbjct: 71 GFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GKVHGSLARAGKVK QTPKVE
Sbjct: 2 GKVHGSLARAGKVKSQTPKVE 22
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 545 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 679
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 62
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 628
GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 71 GFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKV 29
GKVHGSLARAGKV+GQTPKV
Sbjct: 2 GKVHGSLARAGKVRGQTPKV 21
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative;
n=4; Leishmania|Rep: 40S ribosomal protein S30,
putative - Leishmania major
Length = 66
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKV 29
GK+HGSLARAGKVK QTPKV
Sbjct: 2 GKIHGSLARAGKVKNQTPKV 21
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 78
Score = 42.3 bits (95), Expect = 0.015
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GKVHGSLARAGKVK TPKVE
Sbjct: 2 GKVHGSLARAGKVKSATPKVE 22
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74;
root|Rep: 40S ribosomal protein S30 - Homo sapiens
(Human)
Length = 59
Score = 41.5 bits (93), Expect = 0.026
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -2
Query: 85 KVHGSLARAGKVKGQTPKV 29
KVHGSLARAGKV+GQTPKV
Sbjct: 1 KVHGSLARAGKVRGQTPKV 19
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.7 bits (91), Expect = 0.046
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +2
Query: 464 MEGLCTSCRWRQRQAGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 643
++GL R ++GFPM+ + + R L+S G + PR GER+RK+VRG +
Sbjct: 166 LKGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISE 224
Query: 644 NLSVLALVIVRK 679
++ + IV++
Sbjct: 225 DIVQINTKIVKQ 236
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 40.7 bits (91), Expect = 0.046
Identities = 19/57 (33%), Positives = 36/57 (63%)
Frame = +2
Query: 506 AGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 676
+GFPM+ V+ ++ ++L+S G + P +GER+RK++RG + + + +IVR
Sbjct: 159 SGFPMRFDVIGAAKRKILLS-GPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 40.7 bits (91), Expect = 0.046
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +2
Query: 464 MEGLCTSCRWRQRQAGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 637
M GL R G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 153 MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 40.3 bits (90), Expect = 0.060
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -2
Query: 85 KVHGSLARAGKVKGQTPKVE 26
KVHGSLARAGKV+GQTP V+
Sbjct: 1 KVHGSLARAGKVRGQTPNVD 20
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 509 GFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 688
GFPMK+ V R + L++ G ++P + G R+RK+VRG + ++S + + + +G Q
Sbjct: 57 GFPMKEDVDGTRRFKSLVNGGTG-FKPTKKGLRRRKTVRGNTIADDISQINVKVSERGEQ 115
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22,
whole genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 38.7 bits (86), Expect = 0.18
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GK+HG+LA+AGKV+ QTPK+E
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIE 22
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 38.3 bits (85), Expect = 0.24
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 506 AGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 673
+GFPM + + R+L+S G + PR GER+RK+VRG + ++ + VIV
Sbjct: 158 SGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 37.9 bits (84), Expect = 0.32
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
G++HG+LA+AGKV+ QTPKVE
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVE 22
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 35.5 bits (78), Expect = 1.7
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 506 AGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 685
AG PM++ V + + +L+ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 59 AGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGE 117
Query: 686 Q 688
+
Sbjct: 118 E 118
>UniRef50_UPI0000E11517 Cluster: hypothetical protein OM2255_13813;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_13813 - alpha proteobacterium HTCC2255
Length = 218
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 329 CGQSRR*DFTICSCISEGNRHTSWTQWPGVHWSDQGTHSYSC 204
C S D T CS G+R+T WP HW ++SC
Sbjct: 163 CNDSNTSDLTACSA---GSRYTIMLSWPAAHWQHPTITNHSC 201
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GKVHG L RAGKV+ QT K E
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPE 22
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +2
Query: 503 QAGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 682
+ GF M+ + ++R+L+ +G Y + G R+RKS+RG + +++++ +V G
Sbjct: 54 RCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEKGLRRRKSLRGNTISKDITLINTKVVEYG 112
Query: 683 A 685
+
Sbjct: 113 S 113
>UniRef50_Q01QY5 Cluster: Metallophosphoesterase precursor; n=1;
Solibacter usitatus Ellin6076|Rep:
Metallophosphoesterase precursor - Solibacter usitatus
(strain Ellin6076)
Length = 1026
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -2
Query: 394 SSTTSNNFWHPVAGYETFNFMTAVNPVDKILQYAVAYQRAIDTRPGRNGQESI 236
S T N F + G +F+ A +PVD ++A A I T G NG E+I
Sbjct: 729 SGYTFNRFHNQPLGQNPLDFIPANSPVDLTAEFAQAGTYTISTSLGANGSETI 781
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 34.3 bits (75), Expect = 4.0
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2
Query: 79 HGSLARAGKVKGQTPKVE 26
HGSL +AGKV+ QTPK+E
Sbjct: 4 HGSLTKAGKVRSQTPKIE 21
>UniRef50_Q4SFG0 Cluster: Chromosome 1 SCAF14603, whole genome shotgun
sequence; n=3; Clupeocephala|Rep: Chromosome 1 SCAF14603,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1156
Score = 33.9 bits (74), Expect = 5.2
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = -1
Query: 623 ELIYVFSLHRGAVCNMSGPLTSEDEHGCLSGRPVSSGILLVVAASDTKYIALPFIA*LIS 444
++ Y S G+ C+ P + H CL P SG L+VVA + + F+ +
Sbjct: 908 QIFYEVSFDDGSYCDNLHP-ENVLSHDCLQNGPPDSGELIVVAMPNGQVANASFVRSHTN 966
Query: 443 LYFGAHALFVKDTKLVL----VHHFEQLLASRCRVR 348
+Y+ F ++ ++ +HH +Q L R R R
Sbjct: 967 IYYQVE--FQNQSQQMVKPSELHHLDQELPKRVRAR 1000
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 33.5 bits (73), Expect = 6.9
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 88 GKVHGSLARAGKVKGQT 38
GKVHGSL RAGKV+ QT
Sbjct: 2 GKVHGSLTRAGKVRNQT 18
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 33.1 bits (72), Expect = 9.1
Identities = 13/59 (22%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 515 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV-DANLSVLALVIVRKGAQ 688
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQ 463
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,873,060
Number of Sequences: 1657284
Number of extensions: 18110721
Number of successful extensions: 48720
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48683
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -