Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30388
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.3  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   3.1  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   3.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.1  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   5.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   5.4  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   5.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   5.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.4  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 388 TTSNNFWHPVAGYETFNFMTAVNPVD 311
           +TSNN WH   G  + N     NP D
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNPND 395


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 460 MNGRAMYFVSLAATTSRIP 516
           MNG+A+  +SL    SR+P
Sbjct: 67  MNGKALCLMSLGMFLSRVP 85


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 460 MNGRAMYFVSLAATTSRIP 516
           MNG+A+  +SL    SR+P
Sbjct: 67  MNGKALCLMSLGMFLSRVP 85


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
 Frame = +2

Query: 488 RWRQRQAGFPMKQGVLTNSR----VRLLMSKGHSCYRPRRD----GERKRKSVRGCIVDA 643
           +W   Q GFP    ++T  R    +  L     +C+  R D     E   K     ++DA
Sbjct: 342 KWANGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWLSWEEGMKVFEELLLDA 401

Query: 644 NLSVLA 661
           + SV A
Sbjct: 402 DWSVNA 407


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 337 FMTAVNPVDKILQYAVAYQRAIDTRPGRNGQESIGQIKERI 215
           F   ++PVDK+LQ A   + A+       G   I ++++ I
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLI 178


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 337 FMTAVNPVDKILQYAVAYQRAIDTRPGRNGQESIGQIKERI 215
           F   ++PVDK+LQ A   + A+       G   I ++++ I
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLI 178


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRI 410
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 333 MKLNVSYPATGCQKLFEVVDEHKLRI 410
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 770 LSKEDDVRRYVVKRVLPAKEGKENAK 847
           L +E+D+ +  +KRV   KE   N K
Sbjct: 71  LDEENDINQGGLKRVSALKEKNPNLK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,756
Number of Sequences: 336
Number of extensions: 4369
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)