Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30387
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   6.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +2

Query: 509 SFYFMCLLSRFFHYEIYIFNVL*CTFNIWRAMVRLPTGFCSCRSLYVDTERFVTRLV 679
           + + + LL  ++ Y   I  +L C +   RA +  PT F    SLY     F   +V
Sbjct: 276 TMHLLFLLCIYYFYCALI--ILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVV 330


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 502 IKKFLLHVSIISVFPLRNIH 561
           +KK LL   I+ VFPL +++
Sbjct: 28  LKKVLLLSQIVGVFPLNHLN 47


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 301 FRFDSYDVTIWRRSMQFLFERHGIRAMLQFSVKLRLKNVTL 179
           F +   DV I   S  F+F    + A ++     R+KN  L
Sbjct: 100 FSWTFIDVFIMLTSTAFVFRLKQLNAKVEMLKNARVKNTAL 140


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 555 YTFLMFYNVHLIYG 596
           Y +  F+ VHL YG
Sbjct: 115 YYYYAFFGVHLAYG 128



 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 774 FFFLKNHIQWYFTQHVHF 721
           F FL  H   YF  ++HF
Sbjct: 144 FDFLCRHTVEYFQNYIHF 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,428
Number of Sequences: 336
Number of extensions: 4513
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)