Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30385
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.42 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   1.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.1  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.0  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +1

Query: 253 SRCLMSGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFGSTFG 387
           S+ +  G   ++  + + H F+ +  Y ++ A + Q+++  +TFG
Sbjct: 490 SKTVSDGIRHYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 568 QPESLHLVVLYQEKXR 521
           QPE+LHL+V Y +K +
Sbjct: 167 QPEALHLLVDYMKKNK 182


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 568 QPESLHLVVLYQEKXR 521
           QPE+LHL+V Y +K +
Sbjct: 481 QPEALHLLVDYMKKNK 496


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 568 QPESLHLVVLYQEKXR 521
           QPE+LHL+V Y +K +
Sbjct: 714 QPEALHLLVDYMKKNK 729


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 568 QPESLHLVVLYQEKXR 521
           QPE+LHL+V Y +K +
Sbjct: 714 QPEALHLLVDYMKKNK 729


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 640 RYFDLMVFGFLLRHDIAEQHQKANQP 563
           R F + V GFL RH+    H   N P
Sbjct: 734 RRFVVAVVGFLRRHNFKGLHLDWNYP 759


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 472 PNSAPGYCAQGCPGN 428
           P   PG C + CPG+
Sbjct: 97  PVHRPGRCCKTCPGD 111


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 351 LSKEDDVRRYVVKRVLPAKEGKENAK 274
           L +E+D+ +  +KRV   KE   N K
Sbjct: 71  LDEENDINQGGLKRVSALKEKNPNLK 96


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 608 SSPRHSRAASESKPA 564
           SSP+HS +++ + PA
Sbjct: 43  SSPQHSSSSASTSPA 57


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 608 SSPRHSRAASESKPA 564
           SSP+HS +++ + PA
Sbjct: 43  SSPQHSSSSASTSPA 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,748
Number of Sequences: 336
Number of extensions: 2701
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)