Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30385
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   6.5  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   8.5  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    23   8.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 390 LDGGVHFHQSIQEFPGH 440
           +DGG++   S++ FPG+
Sbjct: 167 VDGGLNIPHSVKRFPGY 183


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 450 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 343
           V  GAQ++ G   G  P  + PK    IR     SK
Sbjct: 199 VYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSK 234


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 247 SGSRCLMSGFSIFFSFLGWEHAFDDITTY 333
           +G +  ++ FSIF SF   +    D+T Y
Sbjct: 146 AGQKLTIADFSIFVSFCSLDMMKYDLTAY 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,381
Number of Sequences: 2352
Number of extensions: 12122
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)