Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30385
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 97 4e-20
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 97 4e-20
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 97 4e-20
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 97 4e-20
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 97 4e-20
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 96 9e-20
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 95 2e-19
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 92 1e-18
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 58 3e-08
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE++ +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAREKRQEQI 228
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 110 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 165
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 166 KPRTKAPK 173
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 174 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 226
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 81 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 136
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 137 KPRTKAPK 144
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 145 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 197
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 97.5 bits (232), Expect = 4e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 96.3 bits (229), Expect = 9e-20
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR +AP+
Sbjct: 168 KPRTRAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 95.1 bits (226), Expect = 2e-19
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRK FNLSKEDDVR+YVV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKRFNLSKEDDVRQYVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
KPR KAP+
Sbjct: 168 KPRTKAPK 175
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKQQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 92.3 bits (219), Expect = 1e-18
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENA 277
VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR VV++ L KEGK
Sbjct: 112 VIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRECVVRKPL-NKEGK--- 167
Query: 276 KPRHKAPR 253
+PR KAP+
Sbjct: 168 RPRTKAPK 175
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = -3
Query: 253 IQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 95
IQRLVTP VLQ K AEYAKLLA+R K++K +RQE+I
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKQAKEKRQEQI 228
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 58.0 bits (134), Expect = 3e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 456 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLF 355
VIV+KG ++IPGLTD VPRRLGPK AS+IRKLF
Sbjct: 41 VIVKKGEKDIPGLTDTTVPRRLGPKEASRIRKLF 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,113,040
Number of Sequences: 237096
Number of extensions: 1818323
Number of successful extensions: 4016
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3990
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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