Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30383
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 129 5e-31
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 129 5e-31
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.68
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.6
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 3.6
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 3.6
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 4.8
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 6.3
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 8.3
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 129 bits (311), Expect = 5e-31
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 214 VGIDIFNGKKYEDIVP 261
V +DIFNG+KYED+ P
Sbjct: 61 VALDIFNGRKYEDMSP 76
Score = 93.1 bits (221), Expect = 4e-20
Identities = 39/78 (50%), Positives = 59/78 (75%)
Frame = +3
Query: 258 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKE 437
PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G+LG ++ F+ GK+
Sbjct: 76 PSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFEEGKD 134
Query: 438 LLCTVLKSCGEECVIAVK 491
L+ TV+ + GEE +A +
Sbjct: 135 LIITVVSAMGEEIALACR 152
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 129 bits (311), Expect = 5e-31
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 214 VGIDIFNGKKYEDIVP 261
V +DIFNG+KYED+ P
Sbjct: 61 VALDIFNGRKYEDMSP 76
Score = 93.5 bits (222), Expect = 3e-20
Identities = 39/78 (50%), Positives = 59/78 (75%)
Frame = +3
Query: 258 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKE 437
PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G+LG ++ FD G++
Sbjct: 76 PSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFDEGRD 134
Query: 438 LLCTVLKSCGEECVIAVK 491
L+ TV+ + GEE +A +
Sbjct: 135 LIITVVSAMGEETALACR 152
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.1 bits (62), Expect = 0.68
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + +LTA+ S+P S+V N+S P++ S V P + S ++ SS
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S V P + S +L SS
Sbjct: 1413 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 813 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 344
S + + T + S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 1185 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSI 1241
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1245 STPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1365 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1725 STPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2205 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2493 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2793 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 477 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 885 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1041 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1497 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1665 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1713
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1821 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2013 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2277 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2325
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2589 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2685 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2733
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2913 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2961
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3273 STPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSS 3321
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2481 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2781 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 344
S + + + + S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 3129 STPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSI 3185
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S V + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3357 STPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + TA+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3417 STPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 945 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 993
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N S P++ S V + P + S +L +S
Sbjct: 1173 STPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTS 1221
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1341 STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1389
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N S P++ S V + P + S +L +S
Sbjct: 1485 STPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTS 1533
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1881 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 1929
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2073 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 2121
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 2181 STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 2229
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S V P + S ++ SS
Sbjct: 2253 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSS 2301
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3009 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSS 3057
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 417 STPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 465
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 1101 STPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 1149
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 2745 STPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 2793
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 508 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 368
S + + TA+ S+P STV N+S P++ S + + P + S L +S
Sbjct: 3033 STPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 3081
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 270 NMDVPHVKREDYQLTDISDDGYL 338
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 94 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK-HGHAKVHLVGIDIFNGKKY 246
P +CS ++ ++ C V G+ H H++G+D+ NG Y
Sbjct: 35 PRRCSTCKRINKRSIRCLSCHSVGCLWGHHGEEHAMEHTHMIGVDVKNGHTY 86
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 126 FRYAEGSSMQDC*NVHIQNRKARPR*SSLGWD 221
+ + E +Q C N+ +N +A R SS GWD
Sbjct: 41 YHHLEKGLLQQCFNLVKKNMEALYRQSSFGWD 72
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 170 PHPKPESTATLKFTWLGLISSMVKSMKILSLHTQHGRTPREARRLP 307
P PK +S+ + G ++S V +M LS ++ RTP E R+LP
Sbjct: 64 PLPKRKSSVEKR---AGSVASAVAAMS-LSQNSGEKRTPEEPRKLP 105
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +3
Query: 405 QLRTDFDSGKELLCTVLKSCGEE------CVIAVKANTALENKP 518
QL+ F E LCT+L SCG C KA T L +P
Sbjct: 522 QLQNGFIPTCERLCTILLSCGRHQCNKKCCSGYSKAQTRLARRP 565
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 288 VKREDYQLTDISDDGYL 338
+KREDY+LT ++ GYL
Sbjct: 91 IKREDYELTLCANCGYL 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,041,200
Number of Sequences: 5004
Number of extensions: 63089
Number of successful extensions: 313
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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