Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30383
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 120 1e-27
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 111 7e-25
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 102 3e-22
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 90 4e-21
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 9e-08
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.31
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 32 0.40
02_05_0250 + 27153048-27154453,27154546-27154885 31 0.70
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.2
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 30 1.6
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 30 2.2
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 29 2.8
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 3.8
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 3.8
05_01_0297 - 2314687-2316021 29 5.0
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 28 6.6
10_01_0357 - 3928646-3928954 28 8.7
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 8.7
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 28 8.7
04_01_0031 + 381389-381841 28 8.7
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 120 bits (289), Expect = 1e-27
Identities = 52/77 (67%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = +1
Query: 34 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 210
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 211 LVGIDIFNGKKYEDIVP 261
VGIDIFNGKK EDIVP
Sbjct: 61 FVGIDIFNGKKLEDIVP 77
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/80 (47%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = +3
Query: 258 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDF-DSG 431
PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P D L Q++ F + G
Sbjct: 77 PSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDDTLTNQIKNGFGEEG 136
Query: 432 KELLCTVLKSCGEECVIAVK 491
K+++ TV+ + GEE + AVK
Sbjct: 137 KDMILTVMSAMGEEQICAVK 156
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 111 bits (266), Expect = 7e-25
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Frame = +1
Query: 34 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGH 198
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGH
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73
Query: 199 AKVHLVGIDIFNGKKYEDIVP 261
AK H V IDIFNGKK EDIVP
Sbjct: 74 AKCHFVAIDIFNGKKLEDIVP 94
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/79 (48%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGK 434
PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL++P D L Q++T F GK
Sbjct: 94 PSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGK 153
Query: 435 ELLCTVLKSCGEECVIAVK 491
+L+ TV+ + GEE + A+K
Sbjct: 154 DLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 102 bits (244), Expect = 3e-22
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
Frame = +1
Query: 34 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMS 171
M D E+ HFE+ D+GAS T+P Q +RKNG +++K RPCK +VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382
Query: 172 TSKTGKHGHAKVHLVGIDIFNGKKYEDIVP 261
TSKTGKHGHAK H V IDIFNGKK EDIVP
Sbjct: 1383 TSKTGKHGHAKCHFVAIDIFNGKKLEDIVP 1412
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/79 (49%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGK 434
PS+HN DVPHV R DYQL DIS+DG+++L+ ++G ++DL++P D L TQ++ F GK
Sbjct: 1412 PSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPSDEALLTQIKDGFAEGK 1471
Query: 435 ELLCTVLKSCGEECVIAVK 491
+L+ TV+ + GEE + A+K
Sbjct: 1472 DLIVTVMSAMGEEQICALK 1490
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/79 (48%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGK 434
PS+HN DVPHV R +YQL DIS+DG+++L+ +NG+ ++DL++P D +L +Q++ F GK
Sbjct: 109 PSSHNCDVPHVNRTEYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGK 168
Query: 435 ELLCTVLKSCGEECVIAVK 491
+L+ TV+ + GEE + A+K
Sbjct: 169 DLVVTVMSAMGEEQICALK 187
Score = 64.1 bits (149), Expect(2) = 4e-21
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 154 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDIVP 261
K+VE+STSKTGKHGHAK H V IDIF KK EDIVP
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVP 109
Score = 55.2 bits (127), Expect(2) = 4e-21
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 34 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 156
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +3
Query: 285 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 458
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 459 SCG 467
+ G
Sbjct: 106 AMG 108
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 74 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 187
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 47 KTHTLRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLI 226
K + P TP P PP P P ++ + P K T T+ +W L
Sbjct: 277 KLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETV--SWDSLP 334
Query: 227 SSMVKSMKILS 259
+S++KS+K+++
Sbjct: 335 TSLIKSVKVVA 345
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 31.5 bits (68), Expect = 0.70
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 348 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 503
A GD DL IPD + TQ+ T+ S C V S G C AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 276 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 395
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/90 (27%), Positives = 34/90 (37%)
Frame = +2
Query: 41 TSKTHTLRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLG 220
+S T + TP P PPSP + V L V A P P +T++L G
Sbjct: 544 SSATPSPTARTPSPAPPSPIATKTSTSVV-LSLAAVRATSPATSSP-PRATSSLPLVGAG 601
Query: 221 LISSMVKSMKILSLHTQHGRTPREARRLPT 310
K Q G + EA++L T
Sbjct: 602 SSGPSTHEKKNRKKRAQKGDSDVEAKKLKT 631
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 35 WVTSKTHTLRPETPGPQPPSPCNV 106
W+T T P+ P P PP PC+V
Sbjct: 52 WLTWPPPTPLPDAPPPPPPHPCDV 75
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 19 IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 171
+Q ++ D E H T +ATFPM L N + +GR CK V +S
Sbjct: 431 VQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +3
Query: 354 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 497
N D D I G GTQ D +L +VLKS + CV A KA+
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 384 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 470
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3
Query: 309 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 467
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 65 PETPGPQPPSPCNVRP-CVKTVSLC*RVVHARLLKCPHP 178
PE P PP C + P C C ++ +LL+ HP
Sbjct: 8 PENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>10_01_0357 - 3928646-3928954
Length = 102
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 346 WLTTVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSP 486
W ++ + V SA T+ A C PC NP RS P
Sbjct: 3 WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 136 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 255
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 67 GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 225
G SG+ + + SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 543 GTSGSKCS--LWLSAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>04_01_0031 + 381389-381841
Length = 150
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = +2
Query: 23 KTQQWVTSKTHTLR-----PETPGPQPPSPCNVRP 112
+ ++W T +T TLR P+T P PP P P
Sbjct: 69 RERRWCTPRTSTLRREWALPDTASPPPPLPLEPAP 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,451,151
Number of Sequences: 37544
Number of extensions: 449143
Number of successful extensions: 1712
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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