Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30383
(726 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 152 4e-37
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 151 1e-36
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 151 1e-36
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 151 1e-36
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 151 1e-36
AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p pro... 31 2.1
AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-P... 31 2.1
EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein. 29 6.4
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 29 6.4
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro... 29 6.4
AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA... 29 6.4
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P... 29 6.4
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 152 bits (369), Expect = 4e-37
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +3
Query: 255 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 434
CPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+G+LG QLR DFDSGK
Sbjct: 74 CPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLDFDSGK 133
Query: 435 ELLCTVLKSCGEECVIAVKANTALE 509
+LLCTVLK+CGEECVIA+K NTAL+
Sbjct: 134 DLLCTVLKACGEECVIAIKTNTALD 158
Score = 139 bits (336), Expect = 4e-33
Identities = 63/76 (82%), Positives = 69/76 (90%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 214 VGIDIFNGKKYEDIVP 261
VGIDIF+ KKYEDI P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 151 bits (365), Expect = 1e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 255 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 434
CPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK
Sbjct: 74 CPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGK 133
Query: 435 ELLCTVLKSCGEECVIAVKANTALE 509
+LLCTVLK+CGEECVIA+K NTAL+
Sbjct: 134 DLLCTVLKACGEECVIAIKTNTALD 158
Score = 136 bits (328), Expect = 4e-32
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 214 VGIDIFNGKKYEDIVP 261
VGIDIF+ KKYEDI P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 151 bits (365), Expect = 1e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 255 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 434
CPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK
Sbjct: 74 CPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGK 133
Query: 435 ELLCTVLKSCGEECVIAVKANTALE 509
+LLCTVLK+CGEECVIA+K NTAL+
Sbjct: 134 DLLCTVLKACGEECVIAIKTNTALD 158
Score = 139 bits (336), Expect = 4e-33
Identities = 63/76 (82%), Positives = 69/76 (90%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 214 VGIDIFNGKKYEDIVP 261
VGIDIF+ KKYEDI P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 151 bits (365), Expect = 1e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 255 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 434
CPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK
Sbjct: 74 CPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGK 133
Query: 435 ELLCTVLKSCGEECVIAVKANTALE 509
+LLCTVLK+CGEECVIA+K NTAL+
Sbjct: 134 DLLCTVLKACGEECVIAIKTNTALD 158
Score = 136 bits (328), Expect = 4e-32
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 214 VGIDIFNGKKYEDIVP 261
VGIDIF+ KKYEDI P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 151 bits (365), Expect = 1e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 255 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 434
CPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK
Sbjct: 74 CPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGK 133
Query: 435 ELLCTVLKSCGEECVIAVKANTALE 509
+LLCTVLK+CGEECVIA+K NTAL+
Sbjct: 134 DLLCTVLKACGEECVIAIKTNTALD 158
Score = 136 bits (328), Expect = 4e-32
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = +1
Query: 34 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 213
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 214 VGIDIFNGKKYEDIVP 261
VGIDIF+ KKYEDI P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 185 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 33
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-PA
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 185 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 33
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p
protein.
Length = 1883
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
protein.
Length = 1019
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 130 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 47
RNR+Y W +W RPR LR+++V L
Sbjct: 26 RNRWYLFS--CWRKWFRPRELRARTVNL 51
>AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA
protein.
Length = 1905
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 460 PAVRSASSPSKQTQLSKINQLSIYRVNKLLIFYNQQLLHK 579
P +RS S+ + + IN+L+ R NKLL+ QQLL +
Sbjct: 670 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 709
>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
isoform A protein.
Length = 1087
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 130 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 47
RNR+Y W +W RPR LR+++V L
Sbjct: 26 RNRWYLFS--CWRKWFRPRELRARTVNL 51
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,418,710
Number of Sequences: 53049
Number of extensions: 761179
Number of successful extensions: 2672
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2668
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -