Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30382
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.35 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 445  PVSTSHWSRTRQSSLPRRPTMTAFRRRDHK 534
            P +T+HW     +S   RPT T  +  D K
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPTTTVSQLIDDK 1206



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 406  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMT 510
            W+S ++   W  T    +  +R   +S   RPT T
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTT 1077



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 303  YGGRCHRWLHC 271
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 565 HHLVGGLEACVCDLGDGKLSW 503
           HHL     AC    GD  LSW
Sbjct: 367 HHLARHAVACFLTRGDLWLSW 387


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 276 EAIYDICRRNLDIERPTYTNLNRLIGQIV 362
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 594 WLAVCCTVVTSYPRM 638
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 559 LVGGLEACVCDLG 521
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 614 GTAYSKPCTCHDGGRISPSG 555
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,716
Number of Sequences: 336
Number of extensions: 4126
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)