Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30382
(717 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 155 3e-38
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 155 3e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 153 8e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 153 1e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 153 1e-37
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 153 1e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 153 1e-37
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 87 8e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 87 8e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 87 1e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 87 1e-17
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 85 3e-17
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 85 3e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 85 6e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 84 8e-17
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 84 8e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 62 5e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 61 6e-10
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.035
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.25
At1g68080.1 68414.m07777 expressed protein 28 5.4
At5g45330.1 68418.m05564 expressed protein ; expression supporte... 28 7.1
At4g02300.1 68417.m00311 pectinesterase family protein contains ... 28 7.1
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 28 7.1
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 155 bits (376), Expect = 3e-38
Identities = 74/117 (63%), Positives = 86/117 (73%)
Frame = +3
Query: 258 AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 437
A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLV
Sbjct: 201 AVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLV 260
Query: 438 PYPRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVC 608
PYPRIHF L +YAPVISA KAYH+ P P + P ++A C
Sbjct: 261 PYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
Score = 138 bits (334), Expect = 3e-33
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
QLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFV
Sbjct: 285 QLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 128 bits (310), Expect = 3e-30
Identities = 60/86 (69%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+
Sbjct: 115 VDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDV 258
PQVSTAVVEPYNS+L+TH+ LEH+DV
Sbjct: 175 PQVSTAVVEPYNSVLSTHSLLEHTDV 200
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 155 bits (376), Expect = 3e-38
Identities = 74/117 (63%), Positives = 86/117 (73%)
Frame = +3
Query: 258 AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 437
A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLV
Sbjct: 201 AVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLV 260
Query: 438 PYPRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVC 608
PYPRIHF L +YAPVISA KAYH+ P P + P ++A C
Sbjct: 261 PYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
Score = 138 bits (334), Expect = 3e-33
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
QLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFV
Sbjct: 285 QLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 128 bits (310), Expect = 3e-30
Identities = 60/86 (69%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+
Sbjct: 115 VDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDV 258
PQVSTAVVEPYNS+L+TH+ LEH+DV
Sbjct: 175 PQVSTAVVEPYNSVLSTHSLLEHTDV 200
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (372), Expect = 8e-38
Identities = 69/96 (71%), Positives = 80/96 (83%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPY
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPY 262
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSP 551
PRIHF L +YAPVIS+ KAYH+ F P T P
Sbjct: 263 PRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEP 298
Score = 130 bits (314), Expect = 9e-31
Identities = 54/68 (79%), Positives = 59/68 (86%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
Q SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFV
Sbjct: 285 QFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 123 bits (297), Expect = 1e-28
Identities = 57/87 (65%), Positives = 69/87 (79%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VD L+R+RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+
Sbjct: 115 VDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDVL 261
PQVSTAVVEPYNS+L+TH+ LEH+DV+
Sbjct: 175 PQVSTAVVEPYNSVLSTHSLLEHTDVV 201
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (371), Expect = 1e-37
Identities = 72/117 (61%), Positives = 88/117 (75%)
Frame = +3
Query: 258 AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 437
+ ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLV
Sbjct: 201 SILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
Query: 438 PYPRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVC 608
PYPRIHF L +YAPVISAEKA+H+ A P + P ++A C
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 140 bits (338), Expect = 1e-33
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 127 bits (307), Expect = 6e-30
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+
Sbjct: 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDV 258
PQVST+VVEPYNS+L+TH+ LEH+DV
Sbjct: 175 PQVSTSVVEPYNSVLSTHSLLEHTDV 200
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 153 bits (371), Expect = 1e-37
Identities = 72/117 (61%), Positives = 88/117 (75%)
Frame = +3
Query: 258 AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 437
+ ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLV
Sbjct: 201 SILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
Query: 438 PYPRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVC 608
PYPRIHF L +YAPVISAEKA+H+ A P + P ++A C
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 140 bits (338), Expect = 1e-33
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 127 bits (307), Expect = 6e-30
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+
Sbjct: 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDV 258
PQVST+VVEPYNS+L+TH+ LEH+DV
Sbjct: 175 PQVSTSVVEPYNSVLSTHSLLEHTDV 200
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 72/117 (61%), Positives = 87/117 (74%)
Frame = +3
Query: 258 AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 437
+ ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLV
Sbjct: 201 SILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
Query: 438 PYPRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVC 608
PYPRIHF L +YAPVISAEKA+H+ A P + P ++A C
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 140 bits (338), Expect = 1e-33
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 127 bits (307), Expect = 6e-30
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+
Sbjct: 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDV 258
PQVST+VVEPYNS+L+TH+ LEH+DV
Sbjct: 175 PQVSTSVVEPYNSVLSTHSLLEHTDV 200
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 72/117 (61%), Positives = 87/117 (74%)
Frame = +3
Query: 258 AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 437
+ ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLV
Sbjct: 201 SILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
Query: 438 PYPRIHFPLVTYAPVISAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVC 608
PYPRIHF L +YAPVISAEKA+H+ A P + P ++A C
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 140 bits (338), Expect = 1e-33
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = +2
Query: 509 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 688
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344
Query: 689 DWCPTGFK 712
DWCPTGFK
Sbjct: 345 DWCPTGFK 352
Score = 127 bits (307), Expect = 6e-30
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
VDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+
Sbjct: 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSDV 258
PQVST+VVEPYNS+L+TH+ LEH+DV
Sbjct: 175 PQVSTSVVEPYNSVLSTHSLLEHTDV 200
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 87.4 bits (207), Expect = 8e-18
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+
Sbjct: 202 VLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPF 261
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSP 524
PR+HF +V +AP+ S + S P
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVP 288
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+
Sbjct: 114 IDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 174 PKVSDTVVEPYNATLSVHQLVENAD 198
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+
Sbjct: 285 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 344
Query: 692 WCPTGFK 712
W P K
Sbjct: 345 WIPNNVK 351
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+
Sbjct: 202 VLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPF 261
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSP 524
PR+HF +V +AP+ S + S P
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVP 288
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+
Sbjct: 114 IDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 174 PKVSDTVVEPYNATLSVHQLVENAD 198
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+
Sbjct: 285 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVE 344
Query: 692 WCPTGFK 712
W P K
Sbjct: 345 WIPNNVK 351
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSP 524
PR+HF +V +AP+ S + + P
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVP 287
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ LQGF + H LL+ ++ +Y + + F+++P+
Sbjct: 113 IDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 284 LSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSP 524
PR+HF +V +AP+ S + + P
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVP 287
Score = 70.9 bits (166), Expect = 8e-13
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + + F+++P+
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+
Sbjct: 284 LSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSP 524
PR+HF +V +AP+ S + S P
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+
Sbjct: 284 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVISAEKAYHDSFPSP 524
PR+HF +V +AP+ S + S P
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+
Sbjct: 284 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVIS 488
PR+HF +V +AP+ S
Sbjct: 261 PRLHFFMVGFAPLTS 275
Score = 70.9 bits (166), Expect = 8e-13
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + + F+++P+
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 84.2 bits (199), Expect = 8e-17
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVIS 488
PR+HF +V +AP+ S
Sbjct: 261 PRLHFFMVGFAPLTS 275
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 84.2 bits (199), Expect = 8e-17
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +3
Query: 264 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 443
++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 201 VLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 444 PRIHFPLVTYAPVIS 488
PR+HF +V +AP+ S
Sbjct: 261 PRLHFFMVGFAPLTS 275
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 180
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+
Sbjct: 113 IDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 181 PQVSTAVVEPYNSILTTHTTLEHSD 255
P+VS VVEPYN+ L+ H +E++D
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENAD 197
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 512 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 691
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+
Sbjct: 284 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVE 343
Query: 692 WCPTGFK 712
W P K
Sbjct: 344 WIPNNVK 350
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 255 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 434
C ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +L
Sbjct: 201 CVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASL 260
Query: 435 VPYPRIHFPLVTYAPVISAEKA 500
+P PR HF + Y P+ +A
Sbjct: 261 IPTPRCHFLMTGYTPLTVERQA 282
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 10 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQ 186
++D I + AD L+GF++ H L+E L+ Y KK ++++P +
Sbjct: 118 IMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQME 177
Query: 187 VSTAVVEPYNSILT 228
S VV+PYNS+LT
Sbjct: 178 TSDVVVQPYNSLLT 191
Score = 35.5 bits (78), Expect = 0.035
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 587 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 715
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQV 360
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 255 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 434
C ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +L
Sbjct: 201 CVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASL 260
Query: 435 VPYPRIHFPLVTYAPVISAEKA 500
+P PR HF + Y P+ +A
Sbjct: 261 IPTPRCHFLMTGYTPLTVERQA 282
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 10 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQ 186
++D I + AD L+GF++ H L+E L+ Y KK ++++P +
Sbjct: 118 IMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQME 177
Query: 187 VSTAVVEPYNSILT 228
S VV+PYNS+LT
Sbjct: 178 TSDVVVQPYNSLLT 191
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +2
Query: 587 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 715
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV 360
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.035
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 365 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 499
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 649 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 542
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 688 DELDSTLGFDGSDGRVHILGYDVTTVQ 608
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At5g45330.1 68418.m05564 expressed protein ; expression supported
by MPSS
Length = 571
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 462 LVTYAPVISAEKAYHDSFPSPRSQTHASSPP 554
+VT +P +S+ ++Y S PSP QT +PP
Sbjct: 260 VVTRSPDVSSNQSY-SSNPSPLGQTQLHTPP 289
>At4g02300.1 68417.m00311 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 532
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -3
Query: 556 VGGLEACVCDLGDGKLSW*AFSAEMTGAYVTSGKWIRG*GTKLVWNSVRSTFRAPSNLKE 377
+ LE V DL L + S +T + G T N+ T+ P NLKE
Sbjct: 105 ISDLETAVSDLRSSSLEFNDISMLLTNVMTYQDTCLDGFSTSDNENNNDMTYELPENLKE 164
Query: 376 AVIE 365
+++
Sbjct: 165 IILD 168
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 96 AGTSTEGVEDQESLQTGTLVSELADSVQNQI 4
+G TEGVED S LV D ++ QI
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQI 639
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,058,979
Number of Sequences: 28952
Number of extensions: 382098
Number of successful extensions: 1253
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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