Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30381
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75962-1|CAA53576.1| 277|Homo sapiens OX40 homologue protein. 30 2.0
S76792-1|AAB33944.1| 274|Homo sapiens OX40 protein. 30 2.0
DQ118974-1|AAZ15374.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
BC105072-1|AAI05073.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
BC105070-1|AAI05071.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
AL162741-8|CAI23250.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
AL162741-7|CAI23249.1| 131|Homo sapiens tumor necrosis factor r... 30 2.0
AJ277151-1|CAB96543.1| 277|Homo sapiens CD134 antigen protein. 30 2.0
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 29 3.5
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 29 3.5
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 29 3.5
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 29 3.5
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 29 3.5
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 29 3.5
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 29 3.5
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 29 3.5
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 29 3.5
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 29 3.5
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 29 3.5
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 29 3.5
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 29 3.5
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 29 3.5
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 29 3.5
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 29 3.5
>X75962-1|CAA53576.1| 277|Homo sapiens OX40 homologue protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>S76792-1|AAB33944.1| 274|Homo sapiens OX40 protein.
Length = 274
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 119 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 151
>DQ118974-1|AAZ15374.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC105072-1|AAI05073.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC105070-1|AAI05071.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>AL162741-8|CAI23250.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>AL162741-7|CAI23249.1| 131|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 131
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 67 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 99
>AJ277151-1|CAB96543.1| 277|Homo sapiens CD134 antigen protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 GINSAECPPDQYDPGPN--CAFETICALRSAHS 150
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 133 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 166
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 155 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 188
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 55 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 165
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 224 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,057,838
Number of Sequences: 237096
Number of extensions: 1053202
Number of successful extensions: 2324
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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