Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30380
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...   101   1e-21
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...   101   1e-21
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...   101   1e-21
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    74   2e-13
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    74   2e-13
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    74   2e-13
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    74   2e-13
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    74   2e-13
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    48   2e-05

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFTVGEKF 684
           GYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFTVG  F
Sbjct: 133 GYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNF 192

Query: 685 KYASN 699
           KYASN
Sbjct: 193 KYASN 197



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +2

Query: 392 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWDTP 517
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI W  P
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYP 135



 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = +3

Query: 195 KEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 374
           K+A      ++ NL        EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 28  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87

Query: 375 INQVSPK 395
           IN+V+PK
Sbjct: 88  INKVAPK 94



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 LPAVPESVLKHRKXXEALRTRRLQVTLKRRSSAIKKKREIFKRAEQ 252
           LPAVPES LK  K   + R    +  LK+ +    +K+E   RAE+
Sbjct: 1   LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEK 46


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFTVGEKF 684
           GYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFTVG  F
Sbjct: 146 GYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNF 205

Query: 685 KYASN 699
           KYASN
Sbjct: 206 KYASN 210



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +2

Query: 392 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWDTP 517
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI W  P
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYP 148



 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = +3

Query: 195 KEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 374
           K+A      ++ NL        EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 41  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100

Query: 375 INQVSPK 395
           IN+V+PK
Sbjct: 101 INKVAPK 107



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 23/56 (41%), Positives = 31/56 (55%)
 Frame = +1

Query: 85  PVKGKEDSKKLPAVPESVLKHRKXXEALRTRRLQVTLKRRSSAIKKKREIFKRAEQ 252
           PV  K  +KKLPAVPES LK  K   + R    +  LK+ +    +K+E   RAE+
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEK 59


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFTVGEKF 684
           GYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFTVG  F
Sbjct: 146 GYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNF 205

Query: 685 KYASN 699
           KYASN
Sbjct: 206 KYASN 210



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +2

Query: 392 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWDTP 517
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI W  P
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYP 148



 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = +3

Query: 195 KEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 374
           K+A      ++ NL        EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 41  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100

Query: 375 INQVSPK 395
           IN+V+PK
Sbjct: 101 INKVAPK 107



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 23/56 (41%), Positives = 31/56 (55%)
 Frame = +1

Query: 85  PVKGKEDSKKLPAVPESVLKHRKXXEALRTRRLQVTLKRRSSAIKKKREIFKRAEQ 252
           PV  K  +KKLPAVPES LK  K   + R    +  LK+ +    +K+E   RAE+
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEK 59


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 31/59 (52%), Positives = 46/59 (77%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 684
           G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 31/59 (52%), Positives = 46/59 (77%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 684
           G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 31/59 (52%), Positives = 46/59 (77%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 684
           G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 31/59 (52%), Positives = 46/59 (77%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 684
           G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 31/59 (52%), Positives = 46/59 (77%)
 Frame = +1

Query: 508 GYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 684
           G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -2

Query: 529 HSLSWGI-PSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 389
           H L  GI P +V LGD  H+   L+Q  +HT+V L Q++QLQN  D G
Sbjct: 44  HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 31.9 bits (69), Expect = 0.87
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 386 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFL 258
           +LVDT D+DDK QFG  G+V +  +   +   D   F LD + L
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLIL 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,804,387
Number of Sequences: 53049
Number of extensions: 592904
Number of successful extensions: 1494
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)