Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30378
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   9.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   9.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/69 (18%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +1

Query: 253 LPEEDTPEEIIQRRG--VVLSELQELQDAVEPVLRLMQRVDVMKTIETMRDPKTLINHLS 426
           L + + P  ++QR      L   +++  AV+  ++ + ++   +  +  +  ++ +NHL 
Sbjct: 707 LMKTNPPLSMLQRMAEFTKLDTNRQVNSAVKSTIQSLMKLKSPEWKDLAKKARS-VNHLL 765

Query: 427 TNKEYEFKI 453
           T+ EY++++
Sbjct: 766 THHEYDYEL 774


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +3

Query: 42  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 182
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 348 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 395


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +3

Query: 42  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 182
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 386 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 433


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 501 WKFVESASYLYFCQLVMSPTDKNY 572
           W F E     YF Q      D NY
Sbjct: 180 WTFHEGRKQFYFHQFYKQQPDLNY 203


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 444 LILLVCRKMVYKS 406
           LIL+ CRK V KS
Sbjct: 59  LILITCRKRVSKS 71


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 522 MLTPQISTFIAIFGQTIHAID 460
           +LTP  +   A+F +T+  ID
Sbjct: 312 LLTPVSTMLPAVFAKTVSCID 332


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 183 RSSDWSYVSFAAKNSSKG 130
           +S++WSYVS      S G
Sbjct: 134 KSANWSYVSTVYSEGSYG 151


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 355 MQRVDVMKTIETM 393
           M RVD M T++TM
Sbjct: 471 MDRVDTMDTMDTM 483


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 522 MLTPQISTFIAIFGQTIHAID 460
           +LTP  +   A+F +T+  ID
Sbjct: 312 LLTPVSTMLPAVFAKTVSCID 332


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 183 RSSDWSYVSFAAKNSSKG 130
           +S++WSYVS      S G
Sbjct: 224 KSANWSYVSTVYSEGSYG 241


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,933
Number of Sequences: 438
Number of extensions: 3522
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)