Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30377
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058677-1|AAL13906.1|  360|Drosophila melanogaster LD38670p pro...    44   2e-04
AE014298-1826|AAF48214.2|  360|Drosophila melanogaster CG4645-PA...    44   2e-04

>AY058677-1|AAL13906.1|  360|Drosophila melanogaster LD38670p
           protein.
          Length = 360

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +2

Query: 515 VVERVISSVLPQKVSRNYFDGKIKGKPDLYGPIWIS 622
           V+ER+ +S++P++ S NY    I   PDLYGP WI+
Sbjct: 124 VLERIANSMIPKRASGNYLRMNIGENPDLYGPFWIT 159



 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 462 NFWTIEYYQKYFDVQTVKLWRGLYHQYCPRKS 557
           + +TIEYYQ++F+V T  +   + +   P+++
Sbjct: 106 SLFTIEYYQQFFNVDTYMVLERIANSMIPKRA 137


>AE014298-1826|AAF48214.2|  360|Drosophila melanogaster CG4645-PA
           protein.
          Length = 360

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +2

Query: 515 VVERVISSVLPQKVSRNYFDGKIKGKPDLYGPIWIS 622
           V+ER+ +S++P++ S NY    I   PDLYGP WI+
Sbjct: 124 VLERIANSMIPKRASGNYLRMNIGENPDLYGPFWIT 159



 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 462 NFWTIEYYQKYFDVQTVKLWRGLYHQYCPRKS 557
           + +TIEYYQ++F+V T  +   + +   P+++
Sbjct: 106 SLFTIEYYQQFFNVDTYMVLERIANSMIPKRA 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,682,655
Number of Sequences: 53049
Number of extensions: 500614
Number of successful extensions: 1003
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)