Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30377
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125459-4|AAD12839.1| 287|Caenorhabditis elegans Hypothetical ... 38 0.006
AF125459-3|AAX88817.1| 277|Caenorhabditis elegans Hypothetical ... 38 0.006
AF125459-2|AAX88818.1| 414|Caenorhabditis elegans Hypothetical ... 38 0.006
AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 29 3.5
U61950-1|AAC24289.1| 170|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical... 27 8.2
AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical... 27 8.2
AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical ... 27 8.2
>AF125459-4|AAD12839.1| 287|Caenorhabditis elegans Hypothetical
protein Y25C1A.7b protein.
Length = 287
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 512 EVVERVISSVLPQKVSRNYFDGKIKGKPDLYGPIWIS 622
+V++R+++SV+P RNY ++ PDL+GP W+S
Sbjct: 89 QVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWVS 123
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 462 NFWTIEYYQKYFDVQTVKLWRGLYHQYCP 548
NF++ EYYQ++FDV+T ++ + L + P
Sbjct: 72 NFFSFEYYQQFFDVETDQVIKRLLNSVIP 100
>AF125459-3|AAX88817.1| 277|Caenorhabditis elegans Hypothetical
protein Y25C1A.7a protein.
Length = 277
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 512 EVVERVISSVLPQKVSRNYFDGKIKGKPDLYGPIWIS 622
+V++R+++SV+P RNY ++ PDL+GP W+S
Sbjct: 79 QVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWVS 113
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 462 NFWTIEYYQKYFDVQTVKLWRGLYHQYCP 548
NF++ EYYQ++FDV+T ++ + L + P
Sbjct: 62 NFFSFEYYQQFFDVETDQVIKRLLNSVIP 90
>AF125459-2|AAX88818.1| 414|Caenorhabditis elegans Hypothetical
protein Y25C1A.7c protein.
Length = 414
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 512 EVVERVISSVLPQKVSRNYFDGKIKGKPDLYGPIWIS 622
+V++R+++SV+P RNY ++ PDL+GP W+S
Sbjct: 79 QVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWVS 113
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 462 NFWTIEYYQKYFDVQTVKLWRGLYHQYCP 548
NF++ EYYQ++FDV+T ++ + L + P
Sbjct: 62 NFFSFEYYQQFFDVETDQVIKRLLNSVIP 90
>AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical
protein F10D2.8 protein.
Length = 124
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 426 VPEAETQPQSNHNFWTIEYYQKYFDVQTVKLWRGLYHQYCPRKSLE 563
+ +A T N F+T +KY +V KL + + H P+K +E
Sbjct: 37 IADALTDAGHNVTFFTPTIVEKYRNVSYTKLTKDVVHMDAPKKLME 82
>U61950-1|AAC24289.1| 170|Caenorhabditis elegans Hypothetical
protein C45E5.4 protein.
Length = 170
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 446 TSVESQLLDNRVLSEIL*CADSEVVERVISSVLPQKVSRNYFD 574
T E++ D++V ++ + DS+V VI LPQK + D
Sbjct: 89 TGTEAEPTDSKVFNQSINITDSDVETLVIKVHLPQKTTSQLLD 131
>AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical
protein Y105E8A.10c protein.
Length = 922
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 411 ETPGAVPEAETQPQSNHNFWTIEYYQKYFDVQTVKLWRGLYHQYCPR-KSLETIL 572
E G + + ETQ Q N T+E +K F + T LW G Y ++C R +S ET++
Sbjct: 668 EMAGLMKDDETQ-QLFRN--TLEKAKKVF-IDT--LWTGTYFRFCERSRSRETVM 716
>AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical
protein Y105E8A.10b protein.
Length = 930
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 411 ETPGAVPEAETQPQSNHNFWTIEYYQKYFDVQTVKLWRGLYHQYCPR-KSLETIL 572
E G + + ETQ Q N T+E +K F + T LW G Y ++C R +S ET++
Sbjct: 676 EMAGLMKDDETQ-QLFRN--TLEKAKKVF-IDT--LWTGTYFRFCERSRSRETVM 724
>AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical
protein Y105E8A.10a protein.
Length = 959
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 411 ETPGAVPEAETQPQSNHNFWTIEYYQKYFDVQTVKLWRGLYHQYCPR-KSLETIL 572
E G + + ETQ Q N T+E +K F + T LW G Y ++C R +S ET++
Sbjct: 705 EMAGLMKDDETQ-QLFRN--TLEKAKKVF-IDT--LWTGTYFRFCERSRSRETVM 753
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,679,764
Number of Sequences: 27780
Number of extensions: 277011
Number of successful extensions: 650
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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