Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30375
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +2

Query: 566 VKYF--LLRFFFES*IYLYTNLLLFR 637
           V+YF   + FF++  +YL T+++L R
Sbjct: 152 VEYFQNYIHFFYQLLLYLITDMILMR 177


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 329 YLILSIYVVKFSIF**LCTTMLFTM*---IKQIVYMYTYLFHYISIFINYHISNNRTTTS 499
           Y+IL I    F  +  +C   + T+    +     +Y  L H+++  ++  I       +
Sbjct: 142 YVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVN 201

Query: 500 NIFLFEINLYRNV 538
           N+F  E +  +N+
Sbjct: 202 NLFRIEESEEKNI 214


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 329 YLILSIYVVKFSIF**LCTTMLFTM*---IKQIVYMYTYLFHYISIFINYHISNNRTTTS 499
           Y+IL I    F  +  +C   + T+    +     +Y  L H+++  ++  I       +
Sbjct: 142 YVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVN 201

Query: 500 NIFLFEINLYRNV 538
           N+F  E +  +N+
Sbjct: 202 NLFRIEESEEKNI 214


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 274 MYVIKM*NLLSIYIVINSLFNFKYICC 354
           + V K  N L IY+  N +F F    C
Sbjct: 5   LVVEKFLNSLQIYLQHNQIFGFVTFTC 31


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 610 IYSTFKKKSKQ 578
           +YST+ KKSKQ
Sbjct: 149 LYSTWSKKSKQ 159


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 610 IYSTFKKKSKQ 578
           +YST+ KKSKQ
Sbjct: 149 LYSTWSKKSKQ 159


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 274 MYVIKM*NLLSIYIVINSLFNFKYICC 354
           + V K  N L IY+  N +F F    C
Sbjct: 23  LVVEKFLNSLQIYLQHNQIFGFVTFTC 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,582
Number of Sequences: 336
Number of extensions: 3230
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)