Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30375
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical...    28   6.8  
AF098993-9|AAC67463.3|  469|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z74042-1|CAA98536.1|  444|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine re...    27   8.9  

>Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical
           protein K03D3.14 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/68 (22%), Positives = 32/68 (47%)
 Frame = +1

Query: 271 LMYVIKM*NLLSIYIVINSLFNFKYICC*VFDILIIMYNYAFYNVNKTNCLHVHLFISLY 450
           ++Y++ +   +SIY+V   +  ++Y     F IL ++Y    + +   + L   L   + 
Sbjct: 122 ILYIVHVLKEISIYVVTRRILKYQYKIYNPFSILGLVYGIIIFCMAIFSVLSALLHFPIV 181

Query: 451 KHFYKLSY 474
           K    L+Y
Sbjct: 182 KKIRALTY 189


>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
           protein Y53F4B.21 protein.
          Length = 1099

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -1

Query: 656 LFIPL-FIERAINSYINIFNFQKKI*AKNTLHN*FTILEDTRSDRDLSRIKIY 501
           LF+P+ F+ R I++  NIF+ + +I AK  +    +I +D R+D  L  +K Y
Sbjct: 321 LFVPMEFLRREISNK-NIFDSKTEIFAKKLVQEASSISKD-RADEMLKEVKEY 371


>AF098993-9|AAC67463.3|  469|Caenorhabditis elegans Hypothetical
           protein T10B11.8 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 443 HYISIFINYHISNNRTTTSNIFLFEINLYRNVCPLEL*INCVK 571
           HY + F NY + N +TT+ +     +N+ R + PL+   N +K
Sbjct: 346 HYTNSFDNYRMGNEQTTSYDHHPIPVNV-RRLYPLQSHKNIIK 387


>Z74042-1|CAA98536.1|  444|Caenorhabditis elegans Hypothetical
           protein T11F9.1 protein.
          Length = 444

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 93  FIIFAYIICNVSNVLQVSW 149
           FI+F Y++ NV NV+ + W
Sbjct: 266 FIVFTYLLSNVLNVIIIIW 284


>AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein50 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 621 FVYKYIQLSKKNLSKKYF 568
           FVY+Y+ + + N +KKYF
Sbjct: 110 FVYRYLVIHESNFTKKYF 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,939,414
Number of Sequences: 27780
Number of extensions: 257626
Number of successful extensions: 572
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)