Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30372X
(373 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 96 7e-21
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 62 1e-10
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-09
SB_7706| Best HMM Match : Spectrin (HMM E-Value=0) 53 9e-08
SB_29386| Best HMM Match : Spectrin (HMM E-Value=1.9e-29) 50 8e-07
SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_50472| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_15107| Best HMM Match : Spectrin (HMM E-Value=1.8e-13) 36 0.008
SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12) 34 0.032
SB_53744| Best HMM Match : Spectrin (HMM E-Value=1.8e-28) 31 0.39
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 31 0.39
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.52
SB_32817| Best HMM Match : Spectrin (HMM E-Value=3.7e-21) 29 0.91
SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6) 28 2.1
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 27 3.7
SB_57166| Best HMM Match : 7tm_1 (HMM E-Value=2.2e-25) 27 4.9
SB_50904| Best HMM Match : NACHT (HMM E-Value=2.3e-05) 27 6.4
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 96.3 bits (229), Expect = 7e-21
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +1
Query: 31 KAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQTIRQLG 210
+A QY FDA EAE+WMSEQEL MM ++RGKDE SA ++K+HE LE A+ DYA+T+ +LG
Sbjct: 658 QAKQYYFDAAEAESWMSEQELNMMGDERGKDEASATEMLKRHETLEAAIADYAETVNELG 717
Query: 211 ETVRQLTAEEHPLSD 255
ET L HP S+
Sbjct: 718 ETANGLVESNHPESE 732
Score = 56.4 bits (130), Expect = 7e-09
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +3
Query: 258 IFVKQSEVDKLYAGMKDLARERRAKLDEALRLLQLFRE 371
I ++Q+++DKLYAG+KDLA ERR KLDE L+L QL RE
Sbjct: 734 IKIRQNQIDKLYAGLKDLAEERRGKLDETLKLYQLNRE 771
Score = 36.7 bits (81), Expect = 0.006
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
E+ L Q + Q+ D ++ E W++E+E + + G + Q L KKH+ L +D
Sbjct: 542 EKGAELDQAMQFFQFDRDVDDEETWINEKEPLLQSTNYGNNLFEVQKLQKKHQTLCAEID 601
Query: 181 DYAQTIRQLGETVRQLTAEEHPLSD 255
+ + ++ +L HP ++
Sbjct: 602 IHQKHKERICNQGDELVLGYHPQAE 626
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/78 (16%), Positives = 36/78 (46%)
Frame = +1
Query: 10 NNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYA 189
+ L ++ ++ + W+ E E ++ +++ D +A L +KH+ LE+ ++
Sbjct: 439 SKLKDAQRQEEFNAGVQTMQEWVKELETVIITQEKATDLTTATRLYQKHKQLEKQINAKK 498
Query: 190 QTIRQLGETVRQLTAEEH 243
+ +++L + H
Sbjct: 499 ERLKELDAQAADMVDAGH 516
Score = 31.5 bits (68), Expect = 0.23
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 291 YAGMKDLARERRAKLDEALRLLQLFRE 371
+ ++D A ++RAKLD+ALRL Q + +
Sbjct: 142 WCNLRDTANQKRAKLDKALRLQQFYAQ 168
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKK 153
ER+ L + K +Q + ++ E W++++E +D G+D + L++K
Sbjct: 754 ERRGKLDETLKLYQLNREVDDLELWIADKEQVAGSQDIGQDLAHCELLIEK 804
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 62.1 bits (144), Expect = 1e-10
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
RK +L ++HQYL D +EA++W+ E+E + D GKDE SAQ ++KKHE + ++
Sbjct: 764 RKGHLDDSLQSHQYLVDVSEADSWLMEKEPVVTSSDYGKDEDSAQAMLKKHEAIMSDLEA 823
Query: 184 YAQTIRQLGETVRQ 225
Y+ I L E ++
Sbjct: 824 YSTVIDGLREQSKE 837
Score = 45.6 bits (103), Expect = 1e-05
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQ 171
RK L + H + DA+E + W++E++ + +D GKD S L +KHE LE+
Sbjct: 251 RKERLESAHEIHSFYRDADETKNWINEKDKVLSSDDYGKDLASVNALSRKHEALER 306
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/84 (25%), Positives = 47/84 (55%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R+ L ++ Q+ DA+E E W++E+ L + ++ +D ++ Q+ ++KH+ E +
Sbjct: 40 RRRRLEDAKRYFQFKRDADEVEDWINEK-LQIASDESYRDPMNLQDKLQKHQAFEAEISA 98
Query: 184 YAQTIRQLGETVRQLTAEEHPLSD 255
++ I +L +T ++ E H S+
Sbjct: 99 HSYAITELTDTGEEMINESHYASE 122
Score = 35.5 bits (78), Expect = 0.014
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +1
Query: 28 EKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQTIRQL 207
+K YL + +E +W+SE+E E+ G+D L KK + + + + +
Sbjct: 153 QKRVHYLREVDEVMSWISEKEAIATSEEIGRDLEHVVVLQKKFDDFLKDLQANESRVTYI 212
Query: 208 GETVRQLTAEEHPLSDXFS*NNQK 279
+ QL E HP + S Q+
Sbjct: 213 NDLADQLAEEGHPDMELISMKQQE 236
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
RK L+ + Q+L D + E W+ E+E + G +A + +K + L+Q +D
Sbjct: 699 RKARLADAARLRQFLHDVEDEEVWIREKEPIASSTNTG--HFAADEIKEKMDDLDQKWND 756
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 59.3 bits (137), Expect = 1e-09
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
+RK L + +YL +ANEA++WM+++ +D GKD SA+ L+ +H+ L+ V
Sbjct: 942 QRKQRLHDSFLSQKYLSEANEADSWMNDKAGLAASQDYGKDGASAETLLTRHKALQVDVA 1001
Query: 181 DYAQTIRQLGETVRQLTAEEHPLSDXFS 264
++ TI +L E R+L H S+ S
Sbjct: 1002 AFSTTIDELAEEARRLVQSSHFDSEKIS 1029
Score = 53.2 bits (122), Expect = 6e-08
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
E+ N L Q E+ Q + WM+E E + +ED G+D + L KKH++LE ++
Sbjct: 730 EKGNKLQQAERQRQLNRAMEDVRIWMNETEAVLGLEDTGRDLAGVKFLTKKHQLLESDIE 789
Query: 181 DYAQTIRQLGETVRQLTAEEHPLSD 255
+A I + + ++L ++ H SD
Sbjct: 790 MHATVIVDVADKAQELVSQGHFNSD 814
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 28 EKAHQYLFDAN--EAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQTIR 201
E + F+ N E +AW+ E E + ED GKD S NL+K+H+ L+ + Y +
Sbjct: 1896 EAIQKQTFERNVIELQAWIEEVENALASEDYGKDMRSVNNLIKRHQSLQMDIARYEDRVS 1955
Query: 202 QLGETVRQLTAEEHPLSD 255
+L + + A EH L D
Sbjct: 1956 ELLKQAGEFVAAEHFLKD 1973
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R L HQY E +AW+SE+ + D G+DE SA+ L++KH+ L+ +D
Sbjct: 2179 RNEKLQASLATHQYYDQVFEMDAWVSEKLSLVSSTDYGRDETSAETLLRKHDALQLELDA 2238
Query: 184 YAQTIRQLGETVRQLT 231
IR L +L+
Sbjct: 2239 NESKIRDLRSIYSELS 2254
Score = 47.6 bits (108), Expect = 3e-06
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
ER+ L HQ+L D W+ ++E ED G++ + Q+LMKK E LE ++
Sbjct: 2072 ERELRLQDSLALHQFLADTQVEVDWIKDKEPIAKSEDYGRNLLGVQSLMKKMEGLESEIN 2131
Query: 181 DYAQTIRQLGETVRQLTAEEH 243
+ ++ L ET QL H
Sbjct: 2132 SHELLVQALLETGEQLVLRGH 2152
Score = 43.2 bits (97), Expect = 7e-05
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
+R L + +L +A+E AW+ E+E + +D G+D + LM+K E+ + +
Sbjct: 2284 DRHRRLLDSSRLFNFLREADELGAWVEEKEAIVSSDDCGRDLEHVEMLMQKFEVFTRDLV 2343
Query: 181 DYAQTIRQLGETVRQLTAEEHPLSD 255
+ I +L E + L +EH S+
Sbjct: 2344 SSGERIAKLTEHAQMLLDDEHTDSE 2368
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R L++ +K H+Y + E A++SEQ ED G D Q + + +++V
Sbjct: 1049 RHTRLTESKKLHEYRREVEEISAYVSEQLQTAASEDYGTDFEHLQVIQGRFGDFQRSVAS 1108
Query: 184 YAQTIRQLGETVRQLTAEEH 243
YA+ R + + L +E H
Sbjct: 1109 YAENFRNVDNLAKMLVSEGH 1128
Score = 40.7 bits (91), Expect = 4e-04
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
RK L Q +L DA +AE W+ +++ + + + ++L+K H E+++
Sbjct: 1679 RKLMLQQSTDLQMFLADAEKAENWIKNKQMVAQSIESRESLDNVESLLKSHINFEKSLST 1738
Query: 184 YAQTIRQLGETVRQLTAEEH 243
Y + IR L + +Q +H
Sbjct: 1739 YEENIRSLESSAKQFLQVKH 1758
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R L + + Q+L DA E E+WM+E +L + E ++ + Q ++KH+ E V
Sbjct: 1785 RSGKLGESKLLFQFLRDAKELESWMNE-KLQIAAEASYREATNLQQKLQKHQTFEAEVSA 1843
Query: 184 YAQTIRQLGETVRQL 228
+ + + +T + L
Sbjct: 1844 HKSELDAITQTGQSL 1858
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
+R++ L HQ+++D W+ E D G IS Q L K+H E +
Sbjct: 836 KRRSVLEDAFALHQFIYDIEVEMTWVREHLQQASSGDLGTSLISVQRLQKRHLAFENELT 895
Query: 181 DYAQTI 198
++ I
Sbjct: 896 NHQTRI 901
Score = 31.9 bits (69), Expect = 0.17
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R L ++ ++ +A++ EAW++ +E ++ ED G + + L+KK + E+ +
Sbjct: 2606 RTQQLQHNKEIQRFKREADQLEAWLNAREHDLLSEDVGDSLEAVEELLKKQDEFEKMLLT 2665
Query: 184 YAQTIRQLGET 216
+ L T
Sbjct: 2666 QGEKFNSLTNT 2676
>SB_7706| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 686
Score = 52.8 bits (121), Expect = 9e-08
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R + L++ H + D ++ E+W+ E++L ED GKD +NL KKH+ LE +++
Sbjct: 265 RSDKLAESNALHTFYRDVDDEESWIKEKKLLTSSEDYGKDLSGVENLRKKHQRLEAEINN 324
Query: 184 YAQTIRQLGETVRQLTAEEHPLSD 255
+ I + E + E H +D
Sbjct: 325 HEPRIAAVTECGNKFVEEGHGNAD 348
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
ER++ L + + Q+ DA + E W+SE ++ ++++ KD + Q+ +KH+ E V+
Sbjct: 81 ERRSKLGESKTIQQFSRDAEDIEVWISE-KMQTVLDESYKDPTNLQSKFQKHQAFEAEVE 139
Score = 34.3 bits (75), Expect = 0.032
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 73 WMSEQELYMMVEDRGKDEISAQNLMKKHEILE 168
W ++ E + +D G+D S QNL+KKH+++E
Sbjct: 221 WRTQVEASLSSDDFGRDLASVQNLIKKHQLVE 252
Score = 33.9 bits (74), Expect = 0.042
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R++ L Q+ + +E +W++E+ + +D G + Q L+KKHE E ++
Sbjct: 371 RQHKLDDSLAYQQFGANVDEEISWINEKNTLVGSDDYGDTLAAVQGLLKKHEAFETDLEV 430
Query: 184 YAQTIRQLGETVRQL 228
+ + + + QL
Sbjct: 431 HRERVNDIENAGNQL 445
Score = 33.9 bits (74), Expect = 0.042
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
RK L+ Q+ + A+ E+W+ ++E E+ G+D S Q LM K E + +
Sbjct: 477 RKTKLNDNSAFLQFNWKADVVESWIGDKEGIARSEELGRDLSSVQTLMTKQETFDAGLQA 536
Query: 184 YA-QTIRQLGETVRQLTAEEHPLS 252
+ + I ++ +L +H S
Sbjct: 537 FENEGIARVTALKDELVQSQHEQS 560
>SB_29386| Best HMM Match : Spectrin (HMM E-Value=1.9e-29)
Length = 181
Score = 49.6 bits (113), Expect = 8e-07
Identities = 20/57 (35%), Positives = 38/57 (66%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQ 171
+RK+NL ++ ++ DA++ +AW+SE++ + D G+D S Q L +KH++LE+
Sbjct: 117 QRKDNLDSAQEIQKFHRDADDTKAWISEKDTALSSSDYGRDLASVQALQRKHDVLER 173
Score = 35.5 bits (78), Expect = 0.014
Identities = 21/81 (25%), Positives = 41/81 (50%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
ER+ L + L +A+E E+W++++E + E+ GKD + + KK + ++ +
Sbjct: 11 ERRKKLEDSIHRYTLLREAHELESWINDKEAIVTSEEVGKDFEHVEAMQKKFDDFQKDMS 70
Query: 181 DYAQTIRQLGETVRQLTAEEH 243
I++L +L EEH
Sbjct: 71 ANEVRIKELTILAERL-KEEH 90
>SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISA 135
R+ L ++ QY DAN+AE+WM E+ + ED G+DE SA
Sbjct: 603 RRERLKDAAQSLQYYSDANDAESWMKEKMFVVCSEDYGRDEQSA 646
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
R+N L+ + + D + A A M + E + ED G+ + QN++ KH ++E +
Sbjct: 391 RRNTLTGFTQLVGVFRDMDSAHADMLDIEAGLRSEDYGRHLLDVQNMLDKHSLVESQIQS 450
Query: 184 YAQTIRQLGETVRQLTAEEHP 246
+ + + A +HP
Sbjct: 451 QHERTLAINTQAQSFVAAKHP 471
Score = 29.5 bits (63), Expect = 0.91
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
ER+ L + + + D E + ++ E + ++ G+D S L ++HE LE ++
Sbjct: 496 ERRARLEDSLELYTFFEDVEEEDIFIKETDKLAASKEVGRDLASLTRLQQRHEALEAEIN 555
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +1
Query: 34 AHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQTIRQLGE 213
A ++ A+ E+W+ + + E G+D + + +K+HE + V + + +
Sbjct: 295 AEKFQRKADLRESWLDDMVQVIDDELLGQDAATVEAALKRHEAISTDVKAREERFQMVFN 354
Query: 214 TVRQLTAEEHPLSD 255
++L E++ +D
Sbjct: 355 LAQELIDEDYYKAD 368
>SB_50472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +1
Query: 52 DANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQ 171
DA++ +AW+SE++ + D G+D S Q L +KH++LE+
Sbjct: 2 DADDTKAWISEKDTALSSSDYGRDLASVQALQRKHDVLER 41
>SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQ 171
R+ L + K + +A+E E W++E++ ++ D G D +A L+ KHE +E+
Sbjct: 403 RRARLEESLKLQSFYRNADEEEMWVTEKDYFVQSTDYGHDLNTAMILLTKHEAVER 458
>SB_15107| Best HMM Match : Spectrin (HMM E-Value=1.8e-13)
Length = 143
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILE 168
ER++ L + + Q+ DA + E W+SE ++ ++++ KD + Q+ +KH+ E
Sbjct: 87 ERRSKLGESKTIQQFSRDAEDIEVWISE-KMQTVLDESYKDPTNLQSKFQKHQAFE 141
>SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12)
Length = 186
Score = 34.3 bits (75), Expect = 0.032
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 67 EAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQTIRQLGETVRQLTAEEH 243
E W++E + + V++ G D + + KKHE +E + Y + + + +L E +
Sbjct: 3 ETWLNENQRLVAVDNFGNDLAAVEAATKKHEAIETDIMAYEERVNAIVAVAEELHRENY 61
>SB_53744| Best HMM Match : Spectrin (HMM E-Value=1.8e-28)
Length = 140
Score = 30.7 bits (66), Expect = 0.39
Identities = 17/80 (21%), Positives = 36/80 (45%)
Frame = +1
Query: 4 RKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDD 183
RK L ++L + + +W+ + + ++ KD SA+ L+ +H+ +D
Sbjct: 23 RKGKLLDSYDYQRFLNEFRDLISWIHGIKALVSSDELAKDVASAEALIDRHQEYRAEIDA 82
Query: 184 YAQTIRQLGETVRQLTAEEH 243
T + + R+L +EH
Sbjct: 83 RDSTFQAFDDFGRELLEKEH 102
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 30.7 bits (66), Expect = 0.39
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 112 RGKDEISAQNLMKKHEILEQAVDDYAQTIRQLGETVRQLTAEEHPLSD 255
R ++ A +L K+ + ++ Y+Q+IR LGE LT+E+ L +
Sbjct: 11 RHEESTRAGDLQKEVTQASENIEKYSQSIRDLGEKENVLTSEKKQLEE 58
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 34 AHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQN-LMKKHEILEQAVDDYAQTIRQLG 210
A ++ N E+W + ++ + +D ++ N LMKKHE E + + + Q+
Sbjct: 232 AEKFRHKCNIHESWTNGKDAVLSKDDYSDATLADINALMKKHEAFESDLAAHQDRVDQIV 291
Query: 211 ETVRQLTAEEHPLSD 255
++L A E+ D
Sbjct: 292 AIAQELNALEYSKID 306
>SB_32817| Best HMM Match : Spectrin (HMM E-Value=3.7e-21)
Length = 217
Score = 29.5 bits (63), Expect = 0.91
Identities = 16/82 (19%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 ERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVD 180
ER+ L++ + H + + + + ++E+ + G+D + + L++KH+ +E+ +
Sbjct: 56 ERRQKLAEACEIHAFNRNCRDVSSMINEKAAVQTSGEVGRDLPAVEALIRKHDDVERELT 115
Query: 181 DYAQTIRQL-GETVRQLTAEEH 243
+ +L GE R + ++ H
Sbjct: 116 VIEGKMEELEGEAYRLVRSQPH 137
>SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 478
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 58 NEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEIL-EQAVDDYAQTIRQLGETVRQLTA 234
N + + L + +D + + +K+ +I + VD+Y+Q I QL E + + T
Sbjct: 45 NAKKLMLDNDVLQQQMAQTERDTLEVISFLKQEDIKKDDQVDEYSQQIHQLQEALAEKTN 104
Query: 235 E 237
E
Sbjct: 105 E 105
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 67 EAWMSEQELYMMVEDRGKDEISAQNLMKK 153
+ W E++LY +D GKD Q+L K
Sbjct: 544 DLWALEEKLYQERDDAGKDHFDIQSLHSK 572
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 73 WMSEQELYMMVEDRGKDEISAQNLMKKH 156
WM EL D+GK + SA+ L+KK+
Sbjct: 442 WMEMDELIQNDADKGKFDSSAKTLLKKY 469
>SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 231 SELPNSLSQLTDSLRVIVDSLLQNLVFLHEVLRGDLILASIFHH 100
S L S + + + ++D ++ VF LR ++ ASIFHH
Sbjct: 302 SSLAASAADILEEDEAVLDMAVEGRVFAF--LRSSMVQASIFHH 343
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 103 VEDRGKDEISAQNLMKKHEILEQAVDDYAQTIRQLGETVRQLTAEEHPLSD 255
+ED K++ + L KK E L+ +DD + +L + ++ E L+D
Sbjct: 560 LEDMAKEKTRRRELEKKIEELQDELDDVSTRRNELQKKQEKIIKENDELND 610
>SB_57166| Best HMM Match : 7tm_1 (HMM E-Value=2.2e-25)
Length = 382
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 251 VTXFRETIRSRQVVCGNEGLGSR-KTSQAG*SFTI 352
V FRET RSR + G+EG G+R S+ G + TI
Sbjct: 230 VKIFRETGRSRVLSRGHEGYGTRIALSRMGAASTI 264
>SB_50904| Best HMM Match : NACHT (HMM E-Value=2.3e-05)
Length = 1122
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 169 QAVDDYAQTI-RQLGETVRQLTAEEHPLS 252
Q VD Q + QLG+ V+++++ +HP+S
Sbjct: 647 QGVDQRVQGVGEQLGQQVQEVSSRDHPVS 675
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,630,669
Number of Sequences: 59808
Number of extensions: 214421
Number of successful extensions: 750
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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