Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30372X
(373 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 26 0.12
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 23 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 2.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 2.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 3.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 3.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 21 6.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.2
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 8.2
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 26.2 bits (55), Expect = 0.12
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 351 IVKLHPAWLVFREPSPSFPHTTCLLLIV 268
++ + WLV+ EP+PS + LL I+
Sbjct: 30 LIHIPEHWLVYPEPNPSLHYLLALLYIL 57
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 23.0 bits (47), Expect = 1.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 MMVEDRGKDEISAQNLMKKHEILE 168
M+ E +G DE+ A ++KK I++
Sbjct: 1 MLAERKGTDELYAIKILKKDIIIQ 24
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 329 GSSFASQV-LHSRIQLVYF*LFHENXSLSGCSS 234
G++ AS LH L++ ++HE+ GC+S
Sbjct: 1721 GAAEASAAGLHPNNTLLHSFMYHEHAMTEGCAS 1753
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 329 GSSFASQV-LHSRIQLVYF*LFHENXSLSGCSS 234
G++ AS LH L++ ++HE+ GC+S
Sbjct: 1717 GAAEASAAGLHPNNTLLHSFMYHEHAMTEGCAS 1749
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 3.5
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 73 WMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQT 195
WMS + +M E RG+ + LE+ +D +T
Sbjct: 244 WMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSNDLGKT 284
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 3.5
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 73 WMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQT 195
WMS + +M E RG+ + LE+ +D +T
Sbjct: 244 WMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSNDLGKT 284
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.7
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -2
Query: 216 SLSQLTDSLRVIVDSLLQNLVFLHEVLRGDLILASIFHHHVEFLFAHPGFRFVRIEQVLV 37
+L Q++D++ ++ S ++F+ +L IFHH + P + + Q L
Sbjct: 246 TLPQVSDAIPLL-GSYFNCIMFMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLP 304
Query: 36 CFL 28
C L
Sbjct: 305 CLL 307
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.7
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -2
Query: 216 SLSQLTDSLRVIVDSLLQNLVFLHEVLRGDLILASIFHHHVEFLFAHPGFRFVRIEQVLV 37
+L Q++D++ ++ S ++F+ +L IFHH + P + + Q L
Sbjct: 246 TLPQVSDAIPLL-GSYFNCIMFMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLP 304
Query: 36 CFL 28
C L
Sbjct: 305 CLL 307
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.7
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -2
Query: 216 SLSQLTDSLRVIVDSLLQNLVFLHEVLRGDLILASIFHHHVEFLFAHPGFRFVRIEQVLV 37
+L Q++D++ ++ S ++F+ +L IFHH + P + + Q L
Sbjct: 246 TLPQVSDAIPLL-GSYFNCIMFMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLP 304
Query: 36 CFL 28
C L
Sbjct: 305 CLL 307
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 123 ILASIFHHHVEFLFAHPGFRFVRIEQVLVCFL 28
+L IFHH + P + + Q L C L
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKMLFLQWLPCLL 307
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 123 ILASIFHHHVEFLFAHPGFRFVRIEQVLVCFL 28
+L IFHH + P + + Q L C L
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKMLFLQWLPCLL 307
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 123 ILASIFHHHVEFLFAHPGFRFVRIEQVLVCFL 28
+L IFHH + P + + Q L C L
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKMLFLQWLPCLL 307
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 20.6 bits (41), Expect = 6.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 181 DYAQTIRQLGETVRQLTAEEHPLSD 255
DY+Q G +RQ A P S+
Sbjct: 21 DYSQLFAGFGPYIRQAVAMRDPRSN 45
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 6.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 33 STPVPVRCERSGSLDE 80
S P P+ R+GS DE
Sbjct: 1396 SPPTPLSISRAGSRDE 1411
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.2 bits (40), Expect = 8.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 68 SASFASNRYWCAFS 27
S FAS RY+ A+S
Sbjct: 426 SQRFASGRYYSAYS 439
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,485
Number of Sequences: 438
Number of extensions: 2140
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8928360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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