Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30371
         (601 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)                     28   5.0  
SB_54114| Best HMM Match : Toxin_3 (HMM E-Value=9.4)                   27   8.8  

>SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1008

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 148 YRSPDITNNESSVSNILETSN 210
           Y  PD+TN  ++VSNILE+ +
Sbjct: 624 YTEPDVTNVSNNVSNILESDD 644


>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
          Length = 1998

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 222 PFEICRNTERSQIGDVEED-NNLQLESIMHDEIEELLTKTNEENQEFXXXXXXXXXXXXX 398
           P EI  N ER    DVE+  +  Q+E+  H+++    TKTNE                  
Sbjct: 9   PLEIV-NKER----DVEDKYDKFQIEAGAHEKLSPEKTKTNEIESPIKEGSSQRRTKPTV 63

Query: 399 XXTIKSGRELFAIIK 443
              ++ GR L A+IK
Sbjct: 64  LFALEEGRTLEAVIK 78


>SB_54114| Best HMM Match : Toxin_3 (HMM E-Value=9.4)
          Length = 117

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 95 TFWHISKNLCHFHIHTR 45
          +FW+I  +LCH  +HT+
Sbjct: 23 SFWYILWSLCHLQVHTQ 39


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,481,425
Number of Sequences: 59808
Number of extensions: 318145
Number of successful extensions: 694
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)