Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30371
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095074-1|AAM11402.1|  397|Drosophila melanogaster RE21802p pro...    31   1.6  
AE014298-1369|AAN09615.1|  348|Drosophila melanogaster CG1354-PB...    31   1.6  
AE014298-1368|AAN09614.1|  397|Drosophila melanogaster CG1354-PD...    31   1.6  
AE014298-1367|AAN09613.1|  397|Drosophila melanogaster CG1354-PC...    31   1.6  
AE014298-1366|AAF46520.2|  397|Drosophila melanogaster CG1354-PA...    31   1.6  
AY069308-1|AAL39453.1|  722|Drosophila melanogaster LD01947p pro...    28   8.4  
AE014298-1490|AAF46616.1|  722|Drosophila melanogaster CG1826-PA...    28   8.4  

>AY095074-1|AAM11402.1|  397|Drosophila melanogaster RE21802p
           protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 103 SYILSCTAIEGLKMVYRSPDITNNESSVSNILETSNI-EEIHLKSAE 240
           S+I +C AI  L   +  PD+T+ E  V  + +   I EE+ LK  E
Sbjct: 111 SHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEELRLKDEE 157


>AE014298-1369|AAN09615.1|  348|Drosophila melanogaster CG1354-PB,
           isoform B protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 103 SYILSCTAIEGLKMVYRSPDITNNESSVSNILETSNI-EEIHLKSAE 240
           S+I +C AI  L   +  PD+T+ E  V  + +   I EE+ LK  E
Sbjct: 62  SHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEELRLKDEE 108


>AE014298-1368|AAN09614.1|  397|Drosophila melanogaster CG1354-PD,
           isoform D protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 103 SYILSCTAIEGLKMVYRSPDITNNESSVSNILETSNI-EEIHLKSAE 240
           S+I +C AI  L   +  PD+T+ E  V  + +   I EE+ LK  E
Sbjct: 111 SHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEELRLKDEE 157


>AE014298-1367|AAN09613.1|  397|Drosophila melanogaster CG1354-PC,
           isoform C protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 103 SYILSCTAIEGLKMVYRSPDITNNESSVSNILETSNI-EEIHLKSAE 240
           S+I +C AI  L   +  PD+T+ E  V  + +   I EE+ LK  E
Sbjct: 111 SHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEELRLKDEE 157


>AE014298-1366|AAF46520.2|  397|Drosophila melanogaster CG1354-PA,
           isoform A protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 103 SYILSCTAIEGLKMVYRSPDITNNESSVSNILETSNI-EEIHLKSAE 240
           S+I +C AI  L   +  PD+T+ E  V  + +   I EE+ LK  E
Sbjct: 111 SHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEELRLKDEE 157


>AY069308-1|AAL39453.1|  722|Drosophila melanogaster LD01947p
           protein.
          Length = 722

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 55  IWKWQRFLLMCQ-KVLFSYI-LSCTAIEGLKMVYRSPDITNNESSVSNILETSNIEEIHL 228
           +WKW RF      K + SY+ L    +E L  V R   I + +  +  I E S  + +  
Sbjct: 214 VWKWSRFNSNVDFKSVVSYVRLPLMNLEHLLQVVRPSGILDPDKILDAIDERSTSKALPY 273

Query: 229 KSAETPKE 252
           ++A  P+E
Sbjct: 274 RAALWPEE 281


>AE014298-1490|AAF46616.1|  722|Drosophila melanogaster CG1826-PA
           protein.
          Length = 722

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 55  IWKWQRFLLMCQ-KVLFSYI-LSCTAIEGLKMVYRSPDITNNESSVSNILETSNIEEIHL 228
           +WKW RF      K + SY+ L    +E L  V R   I + +  +  I E S  + +  
Sbjct: 214 VWKWSRFNSNVDFKSVVSYVRLPLMNLEHLLQVVRPSGILDPDKILDAIDERSTSKALPY 273

Query: 229 KSAETPKE 252
           ++A  P+E
Sbjct: 274 RAALWPEE 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,732,030
Number of Sequences: 53049
Number of extensions: 444050
Number of successful extensions: 1070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)