BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30371 (601 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 3.0 AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 3.0 AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 3.0 DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 4.0 DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 7.0 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.2 >DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3 protein. Length = 130 Score = 22.6 bits (46), Expect = 3.0 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 405 TIKSGRELFAIIKTTNENGEVTWDTLSNK 491 T K + +IK EN WD+L+NK Sbjct: 80 TDKQREVIKKVIKFLVENKPELWDSLANK 108 >AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein protein. Length = 130 Score = 22.6 bits (46), Expect = 3.0 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 405 TIKSGRELFAIIKTTNENGEVTWDTLSNK 491 T K + +IK EN WD+L+NK Sbjct: 80 TDKQREVIKKVIKFLVENKPELWDSLANK 108 >AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific protein 3c precursor protein. Length = 130 Score = 22.6 bits (46), Expect = 3.0 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 405 TIKSGRELFAIIKTTNENGEVTWDTLSNK 491 T K + +IK EN WD+L+NK Sbjct: 80 TDKQREVIKKVIKFLVENKPELWDSLANK 108 >DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride channel protein. Length = 383 Score = 22.2 bits (45), Expect = 4.0 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 484 DKVSHVTSPFSFVVL 440 DKVS PFSF++L Sbjct: 360 DKVSRFFFPFSFLIL 374 >DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 510 Score = 21.4 bits (43), Expect = 7.0 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +1 Query: 49 VWIWKWQRFL 78 VWI KW++FL Sbjct: 421 VWIPKWRQFL 430 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.0 bits (42), Expect = 9.2 Identities = 5/8 (62%), Positives = 7/8 (87%) Frame = +3 Query: 573 DHVSWFDY 596 +H+ WFDY Sbjct: 559 NHIEWFDY 566 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 161,510 Number of Sequences: 438 Number of extensions: 3291 Number of successful extensions: 7 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17604432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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