Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30370
(674 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 28 0.061
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 27 0.19
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 27 0.19
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 27 0.19
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 27 0.19
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 27 0.19
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 27 0.19
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 27 0.19
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 24 0.99
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.0
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 9.2
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 28.3 bits (60), Expect = 0.061
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ S +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSSQSSNPPQIYPWMKRVHLGQSTVN 215
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 215
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 215
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 215
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 215
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 143 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 171
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 215
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 406 NFSRVSHVRSPAQVYKWTXPVHSGRRSLN 320
N S+ +P Q+Y W VH G+ ++N
Sbjct: 187 NNSKSGQSSNPPQIYPWMKRVHLGQSTVN 215
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 24.2 bits (50), Expect = 0.99
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 496 SRTEKLKEWEVIQEEAAKRDHRKIGRE 576
S + +K W++ Q E+ R ++K G+E
Sbjct: 391 SEGDFIKLWDMFQNESLTRLYKKAGKE 417
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 41 GGLLALFCSYAGRSYGKSVW 100
GG L + C +AG VW
Sbjct: 525 GGTLIVHCPFAGHPVDSVVW 544
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 165 KGISSTDFNVLEGLIKKIAKEKQPFERLEL 254
+GI T + L + EK+ FERL +
Sbjct: 224 RGIPDTSKQLAAALGMQTTNEKEIFERLSI 253
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,286
Number of Sequences: 336
Number of extensions: 3357
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -