Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30369
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    33   0.001
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.36 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   3.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 141 YGSFQLFNKILLLM*RTGYCIYFHALLVCSLLHFCYYILFLL 266
           Y +F LF   LLL+    Y  Y H L  C+ + F  ++LFLL
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLL 283



 Score = 21.4 bits (43), Expect = 3.3
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +3

Query: 141 YGSFQLFNKILLLM*RTGYCIYFHAL----LVCSLLHFCYYILF 260
           Y +F +F   LL +     CIY+  +    L+C    +C +I+F
Sbjct: 117 YYAFIIFTVHLLFL----LCIYYFVVPLFFLLCIYYFYCAFIIF 156


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 153  QLFNKILLLM*RTGYCIYFHALLVCSLLHFCYYILFL 263
            +L  K +++M  +G  I+   + +CSL+H    + FL
Sbjct: 1151 KLVIKAIIIMILSGCIIFTEGIWICSLIHRKKIVKFL 1187


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 227 FIVAFLLLHFISTSSLAVCLDLNNSHYRR 313
           F VA L   +    S  VC   + SH+R+
Sbjct: 10  FAVATLFAAYCKAESKVVCYYDSKSHFRQ 38


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 218 ISMFIVAFLLLHFISTSSL 274
           +  FIV F+  HF  T  L
Sbjct: 79  LEQFIVRFMKYHFFGTLKL 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,187
Number of Sequences: 336
Number of extensions: 1595
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)