Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30369
         (394 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   2.3  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   4.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   4.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   9.2  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 279  TASELVEIKCNSKNATMNILIMHGNK 202
            T   L  +KCN+K   MN++++H  K
Sbjct: 1000 TPKLLPRLKCNAK---MNVIVVHNGK 1022


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 313 TFIYINYYASIWYINK*YLL 372
           TFI + YYAS+  +   YL+
Sbjct: 164 TFIVMTYYASLMAVTMRYLI 183


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 313 TFIYINYYASIWYINK*YLL 372
           TFI + YYAS+  +   YL+
Sbjct: 164 TFIVMTYYASLMAVTMRYLI 183


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 175 SNILLNNWNDPY 140
           S+++L  WN+PY
Sbjct: 65  SDVILVKWNEPY 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,120
Number of Sequences: 2352
Number of extensions: 5620
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)