BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30369 (394 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L38019-1|AAB04947.2| 2710|Homo sapiens inositol 1,4,5-trisphosph... 30 2.4 D26070-1|BAA05065.1| 2695|Homo sapiens human type 1 inositol 1,4... 30 2.4 AB208868-1|BAD92105.1| 1207|Homo sapiens Inositol 1,4,5-trisphos... 30 2.4 >L38019-1|AAB04947.2| 2710|Homo sapiens inositol 1,4,5-trisphosphate receptor type 1 protein. Length = 2710 Score = 30.3 bits (65), Expect = 2.4 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = +3 Query: 144 GSFQLFNKILLLM*RTGYCIYF---HALLVCSLLHFCYYILFLLVR*LSV*T*IIHIIVD 314 G+F + NKI+ LM G C F + +V + F Y++L+L++ + + V Sbjct: 2318 GAFNVCNKIIFLMSFVGNCGTFTRGYRAMVLD-VEFLYHLLYLVIC-------AMGLFVH 2369 Query: 315 LYLYQLLCFNLVHK 356 + Y LL F+LV++ Sbjct: 2370 EFFYSLLLFDLVYR 2383 >D26070-1|BAA05065.1| 2695|Homo sapiens human type 1 inositol 1,4,5-trisphosphate receptor protein. Length = 2695 Score = 30.3 bits (65), Expect = 2.4 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = +3 Query: 144 GSFQLFNKILLLM*RTGYCIYF---HALLVCSLLHFCYYILFLLVR*LSV*T*IIHIIVD 314 G+F + NKI+ LM G C F + +V + F Y++L+L++ + + V Sbjct: 2303 GAFNVCNKIIFLMSFVGNCGTFTRGYRAMVLD-VEFLYHLLYLVIC-------AMGLFVH 2354 Query: 315 LYLYQLLCFNLVHK 356 + Y LL F+LV++ Sbjct: 2355 EFFYSLLLFDLVYR 2368 >AB208868-1|BAD92105.1| 1207|Homo sapiens Inositol 1,4,5-trisphosphate receptor type 1 variant protein. Length = 1207 Score = 30.3 bits (65), Expect = 2.4 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = +3 Query: 144 GSFQLFNKILLLM*RTGYCIYF---HALLVCSLLHFCYYILFLLVR*LSV*T*IIHIIVD 314 G+F + NKI+ LM G C F + +V + F Y++L+L++ + + V Sbjct: 815 GAFNVCNKIIFLMSFVGNCGTFTRGYRAMVLD-VEFLYHLLYLVIC-------AMGLFVH 866 Query: 315 LYLYQLLCFNLVHK 356 + Y LL F+LV++ Sbjct: 867 EFFYSLLLFDLVYR 880 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 44,986,792 Number of Sequences: 237096 Number of extensions: 762695 Number of successful extensions: 4513 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4513 length of database: 76,859,062 effective HSP length: 82 effective length of database: 57,417,190 effective search space used: 2756025120 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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