Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30369
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L38019-1|AAB04947.2| 2710|Homo sapiens inositol 1,4,5-trisphosph...    30   2.4  
D26070-1|BAA05065.1| 2695|Homo sapiens human type 1 inositol 1,4...    30   2.4  
AB208868-1|BAD92105.1| 1207|Homo sapiens Inositol 1,4,5-trisphos...    30   2.4  

>L38019-1|AAB04947.2| 2710|Homo sapiens inositol 1,4,5-trisphosphate
            receptor type 1 protein.
          Length = 2710

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +3

Query: 144  GSFQLFNKILLLM*RTGYCIYF---HALLVCSLLHFCYYILFLLVR*LSV*T*IIHIIVD 314
            G+F + NKI+ LM   G C  F   +  +V   + F Y++L+L++         + + V 
Sbjct: 2318 GAFNVCNKIIFLMSFVGNCGTFTRGYRAMVLD-VEFLYHLLYLVIC-------AMGLFVH 2369

Query: 315  LYLYQLLCFNLVHK 356
             + Y LL F+LV++
Sbjct: 2370 EFFYSLLLFDLVYR 2383


>D26070-1|BAA05065.1| 2695|Homo sapiens human type 1 inositol
            1,4,5-trisphosphate receptor protein.
          Length = 2695

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +3

Query: 144  GSFQLFNKILLLM*RTGYCIYF---HALLVCSLLHFCYYILFLLVR*LSV*T*IIHIIVD 314
            G+F + NKI+ LM   G C  F   +  +V   + F Y++L+L++         + + V 
Sbjct: 2303 GAFNVCNKIIFLMSFVGNCGTFTRGYRAMVLD-VEFLYHLLYLVIC-------AMGLFVH 2354

Query: 315  LYLYQLLCFNLVHK 356
             + Y LL F+LV++
Sbjct: 2355 EFFYSLLLFDLVYR 2368


>AB208868-1|BAD92105.1| 1207|Homo sapiens Inositol 1,4,5-trisphosphate
            receptor type 1 variant protein.
          Length = 1207

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +3

Query: 144  GSFQLFNKILLLM*RTGYCIYF---HALLVCSLLHFCYYILFLLVR*LSV*T*IIHIIVD 314
            G+F + NKI+ LM   G C  F   +  +V   + F Y++L+L++         + + V 
Sbjct: 815  GAFNVCNKIIFLMSFVGNCGTFTRGYRAMVLD-VEFLYHLLYLVIC-------AMGLFVH 866

Query: 315  LYLYQLLCFNLVHK 356
             + Y LL F+LV++
Sbjct: 867  EFFYSLLLFDLVYR 880


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,986,792
Number of Sequences: 237096
Number of extensions: 762695
Number of successful extensions: 4513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4513
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)