Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30367X
         (472 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...   103   2e-22
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...   103   2e-22
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...   103   2e-22
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...   103   2e-22
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...   103   2e-22
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...   103   2e-22
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...   103   2e-22
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...   103   2e-22
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h...    29   2.4  
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d...    29   2.4  
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d...    29   2.4  
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA...    29   2.4  
AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO...    29   3.2  
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.      27   9.7  

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -3

Query: 254 EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 93
           EVVGHA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 56  EVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 418 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVRKL 248
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVR++
Sbjct: 1   MAVRYELAIGLNKGHKTSKI-RNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREV 57


>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
            homolog protein.
          Length = 3584

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 263  FSTEVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 99
            F+T+     Q +K+ M LL   + +  L+ L R LGT   AK  R  ++  LA M
Sbjct: 2529 FATQHADAPQQQKQLMLLLLEIQSEPKLQRLLRSLGTEHEAKLLRHAIAGSLAAM 2583


>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
            disease protein homolog protein.
          Length = 3583

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 263  FSTEVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 99
            F+T+     Q +K+ M LL   + +  L+ L R LGT   AK  R  ++  LA M
Sbjct: 2528 FATQHADAPQQQKQLMLLLLEIQSEPKLQRLLRSLGTEHEAKLLRHAIAGSLAAM 2582


>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
            disease protein homolog protein.
          Length = 3583

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 263  FSTEVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 99
            F+T+     Q +K+ M LL   + +  L+ L R LGT   AK  R  ++  LA M
Sbjct: 2528 FATQHADAPQQQKQLMLLLLEIQSEPKLQRLLRSLGTEHEAKLLRHAIAGSLAAM 2582


>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
            protein.
          Length = 3583

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 263  FSTEVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 99
            F+T+     Q +K+ M LL   + +  L+ L R LGT   AK  R  ++  LA M
Sbjct: 2528 FATQHADAPQQQKQLMLLLLEIQSEPKLQRLLRSLGTEHEAKLLRHAIAGSLAAM 2582


>AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO,
           isoform O protein.
          Length = 1689

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -3

Query: 437 TRSVRNHGSSF*NRSRPAKRPQNN*NIRWPQGYHRQSHQN*AS*TKGSSNE 285
           +RS R+  S+  ++S   K+P    N R  +  H+Q HQ      KG++NE
Sbjct: 813 SRSRRSSSSNINSKSNNGKQPAKYFNKR-QKNMHKQKHQQKLKQLKGTTNE 862


>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
          Length = 1003

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -1

Query: 307 RLKGLQTKHSKFVRDLVRKLSDTLNMRRGLWSYLRCQKTS 188
           R  G+ + + KF++D  +      N+ RGL++ ++  ++S
Sbjct: 360 RFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSS 399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,119,363
Number of Sequences: 53049
Number of extensions: 341499
Number of successful extensions: 911
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)