Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30366
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938... 104 5e-23
01_05_0105 - 18155135-18155297,18155379-18155515,18155621-181557... 53 2e-07
05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962... 49 3e-06
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689... 49 3e-06
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 48 6e-06
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 36 0.035
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334... 31 0.98
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43... 31 0.98
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 29 2.3
09_02_0209 + 5809753-5810077,5810866-5810987 29 2.3
04_01_0518 - 6795833-6796450,6799940-6800164 29 3.0
02_05_0895 - 32593155-32593190,32594228-32594279,32594544-325945... 29 4.0
03_02_0584 - 9650996-9651488,9651630-9652049,9652129-9652158,965... 28 5.2
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394 28 6.9
09_03_0206 + 13485420-13486439 27 9.2
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250... 27 9.2
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866... 27 9.2
>07_01_1199 +
11391638-11391718,11393477-11393590,11393690-11393826,
11393905-11394064
Length = 163
Score = 104 bits (250), Expect = 5e-23
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +2
Query: 26 MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAG 205
MR+E C+FCSS VYPGHGIQFVRND KIFRFCRSKCH F AYR G
Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHG 60
Query: 206 KELSIDPSFEFEKRRNGP 259
K+++ D +FEFE++RN P
Sbjct: 61 KDMTQDSTFEFERKRNRP 78
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/85 (24%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 PLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLI--K 429
P +Y+R + +T++A+ + +IR R +I +R +QG+ + +RD +E+++DI ++ K
Sbjct: 78 PERYDRNVTEQTLKAISLITKIRHERQKKHITERQKQGKTKQRERDAKELEQDIQMLPKK 137
Query: 430 SPAAGLKQRQALEATEMEVEPETIE 504
+ K + ++ ++ + E +E
Sbjct: 138 VTLSTQKTKVVVKVSQQQTEENLME 162
>01_05_0105 -
18155135-18155297,18155379-18155515,18155621-18155734,
18155768-18155806,18156838-18156993
Length = 202
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +2
Query: 107 IFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAGKELSIDPSFEFEKRRNGP 259
IFRFCRSKCH F AYR GK+++ D +FEFE++RN P
Sbjct: 66 IFRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHGKDMTQDSTFEFERKRNRP 116
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/86 (24%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 PLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSP 435
P +Y+R + +T++A+ + +IR R +I +R +QG+ + +RD +E+++DI ++
Sbjct: 116 PERYDRNVTAQTLKAIPLITKIRHERHKKHITERQKQGKTKQRERDAKELEQDIQMLPKK 175
Query: 436 AAGL---KQRQALEATEMEVEPETIE 504
L K + ++ ++ + E +E
Sbjct: 176 DTMLSTQKTKVVVKVSQQQTEENLME 201
>05_05_0279 -
23794964-23795111,23795486-23795634,23796120-23796221,
23796309-23796384,23796578-23796588
Length = 161
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 26 MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAG 205
++ E C F ++YPG GI+F+R D ++F F SKC F YRK
Sbjct: 3 LKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHK 62
Query: 206 KEL 214
K++
Sbjct: 63 KDI 65
>07_01_0849 +
6896930-6896996,6897453-6897474,6897615-6897690,
6897775-6897876,6898156-6898304,6898637-6898784
Length = 187
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 23 KMRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTA 202
K+ E C F +++YPG GI+F+R D ++F F SKC F YRK
Sbjct: 28 KVWTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKPAKLTWTAMYRKQH 87
Query: 203 GKEL 214
K++
Sbjct: 88 KKDI 91
>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 35 ETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAGKEL 214
E C F ++YPG GI+F+R D ++F F SKC F YRK K++
Sbjct: 1016 ELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHKKDI 1075
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/82 (23%), Positives = 40/82 (48%)
Frame = +1
Query: 241 KETKWPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDIS 420
+ET L+ ++W + +K+ E ++ S + QR Q E WQR R++++ +
Sbjct: 292 EETIDELRGEAKMWQRKTRKLKQGLETLKKVSTDKSKQRSEQDLEKMWQRKTRKLKQGLE 351
Query: 421 LIKSPAAGLKQRQALEATEMEV 486
+K A ++Q+ E+ +
Sbjct: 352 TLKKECADKSKQQSELELELSI 373
>09_04_0594 -
18831011-18831360,18831562-18832111,18832364-18833406,
18833496-18833760,18835194-18835340,18835431-18835511,
18835626-18835804,18835935-18836093,18836269-18836398,
18836935-18837094,18837337-18837419,18837865-18837915,
18838035-18838151,18838273-18838359
Length = 1133
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -3
Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVS--GSTSISVASKACRCFRPAAGDFIKE 417
H + N P+A ASI C + P SM+ G + + A RCF+ G+ +
Sbjct: 34 HPDKNPNDPLAAAKFQASIGCIILMCFPPSMLQWIGDHAFVLPHVALRCFKNELGEAYQV 93
Query: 416 MSLWTSR 396
+S T R
Sbjct: 94 LSDPTQR 100
>03_01_0050 +
430744-431337,432131-432249,432539-433084,433177-433483,
433605-433773,433861-433960,435805-436103,436796-436869,
437007-437442,437622-437650
Length = 890
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 390 RRARSPERHLFDKVTSGWSETATSFRSHRNGSRTRDHRSWDAKRQ 524
RRARSPER L ++ W TA+S S R G + + +RQ
Sbjct: 88 RRARSPERALVRRIAREW--TASSRTSPRGGGAGGEELLGETERQ 130
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471
E +++ E+RQR +RL + RE+E QR+ R ++ ++R A EA
Sbjct: 526 ERLEREREMRQREEKEREQRRLEEERELEKQRERERAAR--QAVERATKEARERAAAEA 582
>09_02_0209 + 5809753-5810077,5810866-5810987
Length = 148
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 575 INSPVAGTMTGASIICFLPFSVPTSMVSG 489
IN VAG GA+++ F S+PT+++SG
Sbjct: 91 INGAVAGFTAGATVLGFRARSLPTAVLSG 119
>04_01_0518 - 6795833-6796450,6799940-6800164
Length = 280
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 KTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK-QRQA 462
+ IE KK EE+ + R I + R++ + V Q+D +++ G + +RQ
Sbjct: 184 RQIEEEKKKEEVERGRLQKEIKEGRESLRKLRLKLGVDVPQQDQEIVQQLERGRQGKRQT 243
Query: 463 LEATEMEVEPETIE 504
+E E++VE E +E
Sbjct: 244 IE--ELQVEHEQLE 255
>02_05_0895 -
32593155-32593190,32594228-32594279,32594544-32594584,
32594795-32594906,32595195-32595268,32595349-32595587,
32595710-32596678,32596725-32596878,32596957-32597244,
32597393-32597534,32598679-32598752,32598870-32598890
Length = 733
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 517 LASQLLWSRVRLPFLWLLKLVAVSDQPLVTLSKRCLSGLLARLFATLPL 371
L + L + F W LK+V + L L+K + +L L TLPL
Sbjct: 454 LGTMLFLHNFQQAFTWSLKIVTATKSALSVLTKPIMGPILEVLEFTLPL 502
>03_02_0584 -
9650996-9651488,9651630-9652049,9652129-9652158,
9652201-9652287,9652657-9653669,9653832-9654854,
9654946-9654969
Length = 1029
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 462 SLSLFQTSRW*LYQRDVSLDFSHVSLPLYLSALSQSLH-NIIITPSLSNLF 313
SL + Q S LY V L +HV +S +S LH NI T +LSN +
Sbjct: 217 SLPIVQDSSNILYHETVQLQKAHVPPVPPVSTVSNGLHRNIASTLNLSNAY 267
>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
Length = 1456
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 241 KETKWPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQ 366
+ET L+ RE+W K ++A+KK+ ++ N+ + L++
Sbjct: 1239 EETDKVLEAIREMWLKLLQALKKLSLDQREEVRNHALTSLQR 1280
>09_03_0206 + 13485420-13486439
Length = 339
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 274 RDCISRAISSLFKLKGWVYRQFLTRSLTVSFSP 176
RDC+ AI +L + G Y F + FSP
Sbjct: 166 RDCVGWAIGNLTAIDGKFYTDFTDHVAVLEFSP 198
>06_03_1208 - 28422941-28423139,28423854-28424434,28424705-28425078,
28425235-28425339,28425902-28425970,28426084-28426156,
28426395-28426478,28426616-28426648,28426731-28426790,
28427535-28427627,28427851-28427970,28428804-28428886,
28428887-28429007,28429114-28429164,28429245-28429333,
28429429-28429561,28430220-28430354,28430581-28430952,
28431679-28431796,28431883-28431998,28432131-28432442
Length = 1106
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 466 LKLVAVSDQPLVTLSKRCLSGLLARLFATLPLCPVS 359
L L +++Q ++S R LS +L + + LPLCP S
Sbjct: 966 LILNVIAEQHTDSISSRPLSSVLEPVISYLPLCPNS 1001
>01_01_1096 -
8659091-8659459,8660730-8661050,8661416-8661694,
8661781-8661897,8662142-8662210,8663204-8663397,
8663552-8663633
Length = 476
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 602 TIQYHHPSSINSPVAGTMTGASIICFLPFSVP 507
T +YHHP +++P +G M + + P + P
Sbjct: 327 TCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,386,109
Number of Sequences: 37544
Number of extensions: 318974
Number of successful extensions: 941
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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